Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_J19
(175 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted pr... 72 4e-13
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 72 5e-13
sp|Q94714|CATL1_PARTE Cathepsin L1 precursor 71 7e-13
sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor 70 1e-12
sp||P09648_1 [Segment 1 of 2] Cathepsin L [Contains: Cathep... 68 7e-12
sp|Q10716|CYSP1_MAIZE Cysteine proteinase 1 precursor 67 1e-11
sp|Q10991|CATL_SHEEP Cathepsin L [Contains: Cathepsin L hea... 66 2e-11
sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine protei... 65 4e-11
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 63 2e-10
sp|Q8HY81|CATS_CANFA Cathepsin S precursor 63 2e-10
>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 72.0 bits (175), Expect = 4e-13
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +3
Query: 3 GNQGCNGGLMDSAFQYIMQYG-LEKERDYPYTAQDGDCEYSKEKVVAHCQGFTDI 164
GNQGCNGGLMD AFQYI + G L+ E YPY A+DG C+Y E VA+ GF DI
Sbjct: 174 GNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDI 228
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 71.6 bits (174), Expect = 5e-13
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +3
Query: 3 GNQGCNGGLMDSAFQYIMQYG-LEKERDYPYTAQDGDCEYSKEKVVAHCQGFTDI 164
GNQGCNGGLMD AFQYI + G L+ E YPY A+DG C+Y E VA+ GF DI
Sbjct: 174 GNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDI 228
>sp|Q94714|CATL1_PARTE Cathepsin L1 precursor
Length = 314
Score = 71.2 bits (173), Expect = 7e-13
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +3
Query: 6 NQGCNGGLMDSAFQYIMQYGLEKERDYPYTAQDGDCEYSKEKVVAHCQGFTDI 164
N GCNGG MDSAF+Y+ GL + +DYPYTA+DG C+ S ++ H QGF DI
Sbjct: 172 NDGCNGGWMDSAFEYVADNGLAEAKDYPYTAKDGTCKTSVKRPYTHVQGFKDI 224
>sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor
Length = 326
Score = 70.5 bits (171), Expect = 1e-12
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +3
Query: 3 GNQGCNGGLMDSAFQYIMQYGLEKERDYPYTAQDGDCEYSKEKVVAHCQGFTDISHG 173
GN GC+GGLM++A+QY+ Q+GLE E YPYTA +G C Y+K+ VA G+ + G
Sbjct: 168 GNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQCRYNKQLGVAKVTGYYTVHSG 224
>sp||P09648_1 [Segment 1 of 2] Cathepsin L [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 176
Score = 67.8 bits (164), Expect = 7e-12
Identities = 33/59 (55%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 GNQGCNGGLMDSAFQYIMQY-GLEKERDYPYTAQDG-DCEYSKEKVVAHCQGFTDISHG 173
GNQGCNGGLMD AFQY+ G++ E YPYTA+D DC Y E A+ GF DI G
Sbjct: 61 GNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQG 119
>sp|Q10716|CYSP1_MAIZE Cysteine proteinase 1 precursor
Length = 371
Score = 67.0 bits (162), Expect = 1e-11
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +3
Query: 6 NQGCNGGLMDSAFQYIMQYG-LEKERDYPYTAQDGDCEYSKEKVVAHCQGFTDIS 167
+ GCNGGLM +AF Y+ + G LE E+DYPYT DG C++ K K+VA Q F+ +S
Sbjct: 205 DSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKCKFDKSKIVASVQNFSVVS 259
>sp|Q10991|CATL_SHEEP Cathepsin L [Contains: Cathepsin L heavy chain; Cathepsin L light
chain]
Length = 217
Score = 66.2 bits (160), Expect = 2e-11
Identities = 32/55 (58%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 3 GNQGCNGGLMDSAFQYIMQY-GLEKERDYPYTAQDGDCEYSKEKVVAHCQGFTDI 164
GNQGCNGGLMD+AFQYI + GL+ E YPY A D C Y E A GF DI
Sbjct: 61 GNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATDTSCNYKPEYSAAKDTGFVDI 115
>sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine proteinase 1) [Contains: Cathepsin
L heavy chain; Cathepsin L light chain]
Length = 341
Score = 65.5 bits (158), Expect = 4e-11
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 GNQGCNGGLMDSAFQYIMQYG-LEKERDYPYTAQDGDCEYSKEKVVAHCQGFTDISHG 173
GN GCNGGLMD+AF+YI G ++ E+ YPY A D C ++K V A +GFTDI G
Sbjct: 184 GNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQG 241
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 63.2 bits (152), Expect = 2e-10
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +3
Query: 3 GNQGCNGGLMDSAFQYIMQY-GLEKERDYPYTAQDGDCEYSKEKVVAHCQGFTDI 164
GN+GCNGGLMD AFQY+ GL+ E YPY A + C+Y+ + VA+ GF DI
Sbjct: 174 GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDI 228
>sp|Q8HY81|CATS_CANFA Cathepsin S precursor
Length = 331
Score = 63.2 bits (152), Expect = 2e-10
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 GNQGCNGGLMDSAFQYIMQY-GLEKERDYPYTAQDGDCEYSKEKVVAHCQGFTDISHG 173
GN+GCNGG M +AFQYI+ G++ E YPY A +G C Y +K A C +T++ G
Sbjct: 176 GNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKCRYDSKKRAATCSKYTELPFG 233
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,408,265
Number of Sequences: 369166
Number of extensions: 360157
Number of successful extensions: 1296
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 68,354,980
effective HSP length: 30
effective length of database: 62,812,930
effective search space used: 1695949110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)