Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_H23
(906 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin) 553 e-157
sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin) 553 e-157
sp|P30883|TBB4_XENLA Tubulin beta-4 chain 553 e-157
sp|P02554|TBB_PIG Tubulin beta chain 553 e-157
sp|P68372|TBBX_MOUSE Tubulin beta-? chain >gi|55977480|sp|P... 553 e-157
sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain >gi|56754798|sp|P... 551 e-157
sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin cla... 551 e-156
sp|P09203|TBB1_CHICK Tubulin beta-1 chain (Beta-tubulin cla... 550 e-156
sp|P04691|TBB1_RAT Tubulin beta chain (T beta-15) 549 e-156
sp|P13602|TBB2_XENLA Tubulin beta-2 chain (Beta-2 tubulin) 549 e-156
>sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin)
Length = 445
Score = 553 bits (1426), Expect = e-157
Identities = 270/276 (97%), Positives = 275/276 (99%)
Frame = +2
Query: 2 ISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDIC 181
ISKIREEYPDR+M TFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 211
Query: 182 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 361
FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA
Sbjct: 212 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 271
Query: 362 PLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 541
PLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML
Sbjct: 272 PLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 331
Query: 542 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRR 721
NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKR+SEQFTAMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRMSEQFTAMFRR 391
Query: 722 KAFLHWYTGEGMDEMEFTEAESNMNDLLSEYQQYQD 829
KAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQD
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
Length = 447
Score = 553 bits (1425), Expect = e-157
Identities = 269/276 (97%), Positives = 275/276 (99%)
Frame = +2
Query: 2 ISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDIC 181
ISKIREEYPDR+M TFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 211
Query: 182 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 361
FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA
Sbjct: 212 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 271
Query: 362 PLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 541
PLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML
Sbjct: 272 PLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 331
Query: 542 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRR 721
NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 722 KAFLHWYTGEGMDEMEFTEAESNMNDLLSEYQQYQD 829
KAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQD
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
Length = 445
Score = 553 bits (1425), Expect = e-157
Identities = 269/276 (97%), Positives = 275/276 (99%)
Frame = +2
Query: 2 ISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDIC 181
ISKIREEYPDR+M TFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 211
Query: 182 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 361
FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA
Sbjct: 212 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 271
Query: 362 PLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 541
PLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML
Sbjct: 272 PLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 331
Query: 542 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRR 721
NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 722 KAFLHWYTGEGMDEMEFTEAESNMNDLLSEYQQYQD 829
KAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQD
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
>sp|P02554|TBB_PIG Tubulin beta chain
Length = 445
Score = 553 bits (1424), Expect = e-157
Identities = 268/276 (97%), Positives = 275/276 (99%)
Frame = +2
Query: 2 ISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDIC 181
ISKIREEYPDR+M TFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 211
Query: 182 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 361
FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA
Sbjct: 212 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 271
Query: 362 PLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 541
PLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQML
Sbjct: 272 PLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQML 331
Query: 542 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRR 721
NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 722 KAFLHWYTGEGMDEMEFTEAESNMNDLLSEYQQYQD 829
KAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQD
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
Length = 445
Score = 553 bits (1424), Expect = e-157
Identities = 268/276 (97%), Positives = 275/276 (99%)
Frame = +2
Query: 2 ISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDIC 181
ISKIREEYPDR+M TFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 211
Query: 182 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 361
FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA
Sbjct: 212 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 271
Query: 362 PLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 541
PLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQML
Sbjct: 272 PLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQML 331
Query: 542 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRR 721
NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 722 KAFLHWYTGEGMDEMEFTEAESNMNDLLSEYQQYQD 829
KAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQD
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
sp|P69895|TBB2_MACMU Tubulin beta-2 chain
sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
sp|P69897|TBB5_RAT Tubulin beta-5 chain
sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta
tubulin)
Length = 444
Score = 551 bits (1420), Expect = e-157
Identities = 267/276 (96%), Positives = 274/276 (99%)
Frame = +2
Query: 2 ISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDIC 181
ISKIREEYPDR+M TFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 211
Query: 182 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 361
FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA
Sbjct: 212 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 271
Query: 362 PLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 541
PLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQML
Sbjct: 272 PLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQML 331
Query: 542 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRR 721
NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ TFIGNSTAIQELFKR+SEQFTAMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 722 KAFLHWYTGEGMDEMEFTEAESNMNDLLSEYQQYQD 829
KAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQD
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
>sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin class-II)
Length = 445
Score = 551 bits (1419), Expect = e-156
Identities = 267/276 (96%), Positives = 275/276 (99%)
Frame = +2
Query: 2 ISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDIC 181
ISKIREEYPDR+M TFSV+PSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 211
Query: 182 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 361
FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA
Sbjct: 212 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 271
Query: 362 PLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 541
PLTSRGSQQYRALTVPELTQQ+FD+KNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML
Sbjct: 272 PLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 331
Query: 542 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRR 721
NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 722 KAFLHWYTGEGMDEMEFTEAESNMNDLLSEYQQYQD 829
KAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQD
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
>sp|P09203|TBB1_CHICK Tubulin beta-1 chain (Beta-tubulin class-I)
Length = 445
Score = 550 bits (1416), Expect = e-156
Identities = 266/276 (96%), Positives = 275/276 (99%)
Frame = +2
Query: 2 ISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDIC 181
ISKIREEYPDR+M TFSV+PSPKVSDTVVEPYNAT+SVHQLVENTDET+CIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATVSVHQLVENTDETYCIDNEALYDIC 211
Query: 182 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 361
FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA
Sbjct: 212 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 271
Query: 362 PLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 541
PLTSRGSQQYRALTVPELTQQ+FD+KNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML
Sbjct: 272 PLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 331
Query: 542 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRR 721
NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 722 KAFLHWYTGEGMDEMEFTEAESNMNDLLSEYQQYQD 829
KAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQD
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
>sp|P04691|TBB1_RAT Tubulin beta chain (T beta-15)
Length = 445
Score = 549 bits (1415), Expect = e-156
Identities = 266/276 (96%), Positives = 275/276 (99%)
Frame = +2
Query: 2 ISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDIC 181
ISKIREEYPDR+M TFSV+PSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 211
Query: 182 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 361
FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA
Sbjct: 212 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 271
Query: 362 PLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 541
PLTSRGSQQYRALTVPELTQQ+FD+KNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML
Sbjct: 272 PLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 331
Query: 542 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRR 721
NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 722 KAFLHWYTGEGMDEMEFTEAESNMNDLLSEYQQYQD 829
KAFLHWYTGEGMDEMEFTEAESNMN+L+SEYQQYQD
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNELVSEYQQYQD 427
>sp|P13602|TBB2_XENLA Tubulin beta-2 chain (Beta-2 tubulin)
Length = 443
Score = 549 bits (1414), Expect = e-156
Identities = 266/276 (96%), Positives = 275/276 (99%)
Frame = +2
Query: 2 ISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDIC 181
ISKIREEYPDR+M TFSV+PSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 211
Query: 182 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 361
FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA
Sbjct: 212 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 271
Query: 362 PLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 541
PLTSRGSQQYRALTVPELTQQ+FD+KNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML
Sbjct: 272 PLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQML 331
Query: 542 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRR 721
NVQNK+SSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRR
Sbjct: 332 NVQNKSSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 722 KAFLHWYTGEGMDEMEFTEAESNMNDLLSEYQQYQD 829
KAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQD
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,154,477
Number of Sequences: 369166
Number of extensions: 1756242
Number of successful extensions: 5145
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4959
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9174518830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)