Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_G24
(854 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin) 569 e-162
sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin) 568 e-162
sp|P30883|TBB4_XENLA Tubulin beta-4 chain 568 e-162
sp|P02554|TBB_PIG Tubulin beta chain 568 e-162
sp|P68372|TBBX_MOUSE Tubulin beta-? chain >gi|55977480|sp|P... 568 e-162
sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain >gi|56754798|sp|P... 566 e-161
sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin cla... 566 e-161
sp|P09203|TBB1_CHICK Tubulin beta-1 chain (Beta-tubulin cla... 565 e-161
sp|P04691|TBB1_RAT Tubulin beta chain (T beta-15) 565 e-161
sp|P13602|TBB2_XENLA Tubulin beta-2 chain (Beta-2 tubulin) 564 e-160
>sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin)
Length = 445
Score = 569 bits (1466), Expect = e-162
Identities = 279/284 (98%), Positives = 283/284 (99%)
Frame = +1
Query: 1 MGTLLISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEA 180
MGTLLISKIREEYPDR+M TFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 206
Query: 181 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 360
LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 361 MPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 540
MPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV
Sbjct: 267 MPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 326
Query: 541 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFT 720
DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKR+SEQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRMSEQFT 386
Query: 721 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 852
AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 387 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
Length = 447
Score = 568 bits (1465), Expect = e-162
Identities = 278/284 (97%), Positives = 283/284 (99%)
Frame = +1
Query: 1 MGTLLISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEA 180
MGTLLISKIREEYPDR+M TFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 206
Query: 181 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 360
LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 361 MPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 540
MPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV
Sbjct: 267 MPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 326
Query: 541 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFT 720
DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
Query: 721 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 852
AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 387 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
Length = 445
Score = 568 bits (1465), Expect = e-162
Identities = 278/284 (97%), Positives = 283/284 (99%)
Frame = +1
Query: 1 MGTLLISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEA 180
MGTLLISKIREEYPDR+M TFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 206
Query: 181 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 360
LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 361 MPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 540
MPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV
Sbjct: 267 MPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 326
Query: 541 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFT 720
DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
Query: 721 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 852
AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 387 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>sp|P02554|TBB_PIG Tubulin beta chain
Length = 445
Score = 568 bits (1464), Expect = e-162
Identities = 277/284 (97%), Positives = 283/284 (99%)
Frame = +1
Query: 1 MGTLLISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEA 180
MGTLLISKIREEYPDR+M TFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 206
Query: 181 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 360
LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 361 MPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 540
MPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEV
Sbjct: 267 MPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEV 326
Query: 541 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFT 720
DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
Query: 721 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 852
AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 387 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
Length = 445
Score = 568 bits (1464), Expect = e-162
Identities = 277/284 (97%), Positives = 283/284 (99%)
Frame = +1
Query: 1 MGTLLISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEA 180
MGTLLISKIREEYPDR+M TFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 206
Query: 181 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 360
LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 361 MPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 540
MPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEV
Sbjct: 267 MPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEV 326
Query: 541 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFT 720
DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
Query: 721 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 852
AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 387 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
sp|P69895|TBB2_MACMU Tubulin beta-2 chain
sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
sp|P69897|TBB5_RAT Tubulin beta-5 chain
sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta
tubulin)
Length = 444
Score = 567 bits (1460), Expect = e-161
Identities = 276/284 (97%), Positives = 282/284 (99%)
Frame = +1
Query: 1 MGTLLISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEA 180
MGTLLISKIREEYPDR+M TFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 206
Query: 181 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 360
LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 361 MPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 540
MPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEV
Sbjct: 267 MPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEV 326
Query: 541 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFT 720
DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ TFIGNSTAIQELFKR+SEQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFT 386
Query: 721 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 852
AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 387 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin class-II)
Length = 445
Score = 566 bits (1459), Expect = e-161
Identities = 276/284 (97%), Positives = 283/284 (99%)
Frame = +1
Query: 1 MGTLLISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEA 180
MGTLLISKIREEYPDR+M TFSV+PSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 206
Query: 181 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 360
LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 361 MPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 540
MPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMMAACDPRHGRYLTVAAIFRGRMSMKEV
Sbjct: 267 MPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 326
Query: 541 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFT 720
DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
Query: 721 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 852
AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 387 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>sp|P09203|TBB1_CHICK Tubulin beta-1 chain (Beta-tubulin class-I)
Length = 445
Score = 565 bits (1456), Expect = e-161
Identities = 275/284 (96%), Positives = 283/284 (99%)
Frame = +1
Query: 1 MGTLLISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEA 180
MGTLLISKIREEYPDR+M TFSV+PSPKVSDTVVEPYNAT+SVHQLVENTDET+CIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATVSVHQLVENTDETYCIDNEA 206
Query: 181 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 360
LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 361 MPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 540
MPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMMAACDPRHGRYLTVAAIFRGRMSMKEV
Sbjct: 267 MPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 326
Query: 541 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFT 720
DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
Query: 721 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 852
AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 387 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>sp|P04691|TBB1_RAT Tubulin beta chain (T beta-15)
Length = 445
Score = 565 bits (1455), Expect = e-161
Identities = 275/284 (96%), Positives = 283/284 (99%)
Frame = +1
Query: 1 MGTLLISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEA 180
MGTLLISKIREEYPDR+M TFSV+PSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 206
Query: 181 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 360
LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 361 MPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 540
MPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMMAACDPRHGRYLTVAAIFRGRMSMKEV
Sbjct: 267 MPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 326
Query: 541 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFT 720
DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
Query: 721 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 852
AMFRRKAFLHWYTGEGMDEMEFTEAESNMN+LVSEYQQYQDATA
Sbjct: 387 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNELVSEYQQYQDATA 430
>sp|P13602|TBB2_XENLA Tubulin beta-2 chain (Beta-2 tubulin)
Length = 443
Score = 564 bits (1454), Expect = e-160
Identities = 275/284 (96%), Positives = 283/284 (99%)
Frame = +1
Query: 1 MGTLLISKIREEYPDRVMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEA 180
MGTLLISKIREEYPDR+M TFSV+PSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEA
Sbjct: 147 MGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 206
Query: 181 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 360
LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF
Sbjct: 207 LYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 266
Query: 361 MPGFAPLTSRGSQQYRALTVPELTQQIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 540
MPGFAPLTSRGSQQYRALTVPELTQQ+FD+KNMMAACDPRHGRYLTVAAIFRGRMSMKEV
Sbjct: 267 MPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 326
Query: 541 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFT 720
DEQMLNVQNK+SSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFT
Sbjct: 327 DEQMLNVQNKSSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
Query: 721 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 852
AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 387 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,531,570
Number of Sequences: 369166
Number of extensions: 1752320
Number of successful extensions: 5225
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5024
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8438301375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)