Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_G12
(945 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 542 e-154
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 542 e-154
sp|P53458|ACT5_DIPDE Actin-5 541 e-154
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 541 e-153
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 541 e-153
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 541 e-153
sp|P92176|ACT2_LUMTE Actin-2 541 e-153
sp|P12716|ACTC_PISOC Actin, cytoplasmic 540 e-153
sp|P53470|ACT1_SCHMA Actin-1 540 e-153
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 540 e-153
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 542 bits (1396), Expect = e-154
Identities = 266/282 (94%), Positives = 276/282 (97%)
Frame = +3
Query: 3 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 182
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154
Query: 183 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 362
DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 363 EKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVG 542
EKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG+E+ G
Sbjct: 215 EKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAG 274
Query: 543 IHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPP 722
IHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APP
Sbjct: 275 IHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPP 334
Query: 723 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 848
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 542 bits (1396), Expect = e-154
Identities = 266/282 (94%), Positives = 277/282 (98%)
Frame = +3
Query: 3 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 182
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154
Query: 183 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 362
DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 363 EKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVG 542
EKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG+E+ G
Sbjct: 215 EKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAAG 274
Query: 543 IHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPP 722
IHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APP
Sbjct: 275 IHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPP 334
Query: 723 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 848
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P53458|ACT5_DIPDE Actin-5
Length = 371
Score = 541 bits (1395), Expect = e-154
Identities = 268/282 (95%), Positives = 276/282 (97%)
Frame = +3
Query: 3 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 182
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 90 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 149
Query: 183 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 362
DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 150 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 209
Query: 363 EKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVG 542
EKLCY+ALDF+ EM A++SS+LEKSYELPDGQVITIGNERFRCPEALFQPSFLG+ES G
Sbjct: 210 EKLCYVALDFEQEMSNAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAG 269
Query: 543 IHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPP 722
IHETTYNSIMKCDVDIRKDLYAN VLSGGSTMYPGI+DRMQKEISALAP TMKIKIVAPP
Sbjct: 270 IHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGISDRMQKEISALAPSTMKIKIVAPP 329
Query: 723 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 848
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 330 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 371
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 541 bits (1394), Expect = e-153
Identities = 265/282 (93%), Positives = 276/282 (97%)
Frame = +3
Query: 3 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 182
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVI 154
Query: 183 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 362
DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 363 EKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVG 542
EKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA++QPSFLG+ES G
Sbjct: 215 EKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMYQPSFLGMESAG 274
Query: 543 IHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPP 722
IHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APP
Sbjct: 275 IHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPP 334
Query: 723 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 848
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 541 bits (1394), Expect = e-153
Identities = 266/282 (94%), Positives = 275/282 (97%)
Frame = +3
Query: 3 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 182
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154
Query: 183 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 362
DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 363 EKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVG 542
EKLCY+ALDF+ EM TA+ SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG+ES G
Sbjct: 215 EKLCYVALDFEQEMHTAATSSSLEKSYELPDGQVITIGNERFRCPEAVFQPSFLGMESAG 274
Query: 543 IHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPP 722
IHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APP
Sbjct: 275 IHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPP 334
Query: 723 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 848
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 541 bits (1394), Expect = e-153
Identities = 265/282 (93%), Positives = 276/282 (97%)
Frame = +3
Query: 3 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 182
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVM 154
Query: 183 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 362
DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 363 EKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVG 542
EKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG+E+ G
Sbjct: 215 EKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAG 274
Query: 543 IHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPP 722
IHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APP
Sbjct: 275 IHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPP 334
Query: 723 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 848
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 541 bits (1393), Expect = e-153
Identities = 267/282 (94%), Positives = 276/282 (97%)
Frame = +3
Query: 3 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 182
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 154
Query: 183 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 362
DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 363 EKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVG 542
EKLCY+ALDF+ EM TASASSSLEKSYELPDGQVITIGNERFRCPEA+F SFLG+ESVG
Sbjct: 215 EKLCYVALDFEQEMNTASASSSLEKSYELPDGQVITIGNERFRCPEAMFHASFLGMESVG 274
Query: 543 IHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPP 722
IHETTYNSIMKCDVDIRKDLYAN VLSGG+TM+PGIADRMQKEI+ALAPPTMKIKI+APP
Sbjct: 275 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPPTMKIKIIAPP 334
Query: 723 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 848
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 540 bits (1392), Expect = e-153
Identities = 265/282 (93%), Positives = 276/282 (97%)
Frame = +3
Query: 3 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 182
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVF 154
Query: 183 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 362
DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 363 EKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVG 542
EKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG+ES G
Sbjct: 215 EKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAG 274
Query: 543 IHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPP 722
IHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKE++ALAPPTMKIKI+APP
Sbjct: 275 IHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEVTALAPPTMKIKIIAPP 334
Query: 723 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 848
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P53470|ACT1_SCHMA Actin-1
Length = 376
Score = 540 bits (1391), Expect = e-153
Identities = 267/282 (94%), Positives = 276/282 (97%)
Frame = +3
Query: 3 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 182
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVL 154
Query: 183 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 362
DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY+MKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIK 214
Query: 363 EKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVG 542
EKLCY+ALDF+ EM TA++SS+LEKSYELPDGQVITIGNERFRCPEALFQPSFLG+E+ G
Sbjct: 215 EKLCYVALDFEQEMGTAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEASG 274
Query: 543 IHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPP 722
IHETTYNSIMKCDVDIRKDLY+N VLSGGSTMYPGIADRMQKEISALAP TMKIKIVAPP
Sbjct: 275 IHETTYNSIMKCDVDIRKDLYSNTVLSGGSTMYPGIADRMQKEISALAPSTMKIKIVAPP 334
Query: 723 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 848
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 540 bits (1391), Expect = e-153
Identities = 265/282 (93%), Positives = 275/282 (97%)
Frame = +3
Query: 3 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVL 182
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVM 154
Query: 183 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 362
DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 363 EKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVG 542
EKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA FQPSFLG+E+ G
Sbjct: 215 EKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEATFQPSFLGMEAAG 274
Query: 543 IHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPP 722
IHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APP
Sbjct: 275 IHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPP 334
Query: 723 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 848
ERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,926,640
Number of Sequences: 369166
Number of extensions: 2251997
Number of successful extensions: 6653
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6481
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9798962520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)