Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_G11
(930 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammon... 437 e-122
sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammon... 435 e-121
sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammon... 434 e-121
sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammon... 433 e-121
sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammon... 432 e-121
sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammon... 432 e-121
sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia... 432 e-121
sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammon... 429 e-120
sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia... 429 e-120
sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (... 426 e-119
>sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 437 bits (1123), Expect = e-122
Identities = 194/286 (67%), Positives = 232/286 (81%)
Frame = +2
Query: 2 YLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEY 181
YL PVA+F DPFR + NK+V CE + Y++ P ++NLRHSC+ M + HPWFG+EQEY
Sbjct: 78 YLSPVAMFRDPFRKEPNKLVFCEVFKYNRKPAETNLRHSCKRIMDMVSNQHPWFGMEQEY 137
Query: 182 TLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEV 361
TL+ D +PF WP GFPG QGPYYCGVG +K +GRDI+EAHY+ACL+AG+KI GTNAEV
Sbjct: 138 TLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGVKITGTNAEV 197
Query: 362 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 541
MPAQWEFQIGPCEGI + DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+S
Sbjct: 198 MPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFS 257
Query: 542 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 721
T MR G+KYIEEAI+K+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVA
Sbjct: 258 TKAMREENGLKYIEEAIDKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVA 317
Query: 722 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 859
NRGASIRIPR V ++ GY EDRRPS+NCDPY+VTE IVRT +L +
Sbjct: 318 NRGASIRIPRTVGQEKRGYFEDRRPSANCDPYAVTEAIVRTCLLNE 363
>sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammonia ligase)
Length = 361
Score = 435 bits (1118), Expect = e-121
Identities = 199/286 (69%), Positives = 234/286 (81%)
Frame = +2
Query: 2 YLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEY 181
YL+PVA++ DPFR +NK+VLCETY Y++ P D+N R C E M A D HPWFG+EQEY
Sbjct: 75 YLYPVAVYRDPFRLGNNKLVLCETYKYNKKPADTNQRWKCMEVMTRAADQHPWFGMEQEY 134
Query: 182 TLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEV 361
TLLDID +P WPK G+PG QGPYYCGVG N+V+GRD++EAHY+ACL AGI I+G NA+V
Sbjct: 135 TLLDIDKHPLGWPKNGYPGPQGPYYCGVGANRVYGRDVVEAHYRACLCAGINISGENAKV 194
Query: 362 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 541
MPAQWEFQ+GPCEGI + D LWMARYLLHRVAEDF VVV+ DPKPI GDWNGAG HTN+S
Sbjct: 195 MPAQWEFQVGPCEGITMGDDLWMARYLLHRVAEDFDVVVTLDPKPIPGDWNGAGMHTNFS 254
Query: 542 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 721
T MR P GI IE AI+K+SK H +HI+AYDPH G+DN RRLTG +ETS+I DFS+GVA
Sbjct: 255 TEAMRGPNGILEIESAIDKLSKVHEKHIKAYDPHAGKDNERRLTGHYETSSIHDFSAGVA 314
Query: 722 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 859
NRGASIRIPR V+E+ GYLEDRRPSSN DPY V+ER+VRT L +
Sbjct: 315 NRGASIRIPRGVAEEKTGYLEDRRPSSNADPYVVSERLVRTICLNE 360
>sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 434 bits (1117), Expect = e-121
Identities = 193/286 (67%), Positives = 231/286 (80%)
Frame = +2
Query: 2 YLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEY 181
YLHPVA+F DPFR NK+VLCE + Y++ P ++NLRH C+ M + HPWFG+EQEY
Sbjct: 78 YLHPVAMFRDPFRRDPNKLVLCEVFKYNRKPAETNLRHICKRIMDMVSNQHPWFGMEQEY 137
Query: 182 TLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEV 361
TL+ D +PF WP GFPG QGPYYCGVG +K +GRDI+EAHY+ACL+AG+KI GTNAEV
Sbjct: 138 TLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGVKITGTNAEV 197
Query: 362 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 541
MPAQWEFQIGPCEGI + DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+S
Sbjct: 198 MPAQWEFQIGPCEGIRMGDHLWIARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFS 257
Query: 542 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 721
T MR G+K+IEEAI+K+SKRH HI AYDP G DN R LTG HETS I+DFS+GVA
Sbjct: 258 TKAMREENGLKWIEEAIDKLSKRHQYHIRAYDPKGGLDNARALTGFHETSNINDFSAGVA 317
Query: 722 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 859
NRGASIRIPR V ++ GY EDRRPS+NCDPY+VTE IVRT +L +
Sbjct: 318 NRGASIRIPRTVGQEKKGYFEDRRPSANCDPYAVTEAIVRTCLLNE 363
>sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 433 bits (1114), Expect = e-121
Identities = 192/286 (67%), Positives = 232/286 (81%)
Frame = +2
Query: 2 YLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEY 181
YL P A+F DPFR NK+V CE + Y++ P ++NLRH+C+ M + HPWFG+EQEY
Sbjct: 78 YLVPAAMFRDPFRKDPNKLVFCEVFKYNRKPAETNLRHTCKRIMDMVSNQHPWFGMEQEY 137
Query: 182 TLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEV 361
TL+ D +PF WP GFPG QGPYYCGVG +K +GRDI+EAHY+ACL+AGIKIAGTNAEV
Sbjct: 138 TLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKIAGTNAEV 197
Query: 362 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 541
MPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+S
Sbjct: 198 MPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFS 257
Query: 542 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 721
T MR G+KYIEE+IEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVA
Sbjct: 258 TKAMREENGLKYIEESIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVA 317
Query: 722 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 859
NRGASIRIPR V ++ GY EDRRPS+NCDP+SVTE ++RT +L +
Sbjct: 318 NRGASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNE 363
>sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 432 bits (1111), Expect = e-121
Identities = 191/286 (66%), Positives = 232/286 (81%)
Frame = +2
Query: 2 YLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEY 181
YL P A+F DPFR NK+VLCE + Y++ P ++NLRH+C+ M + HPWFG+EQEY
Sbjct: 78 YLVPAAMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMDMVSNQHPWFGMEQEY 137
Query: 182 TLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEV 361
TL+ D +PF WP GFPG QGPYYCGVG ++ +GRDI+EAHY+ACL+AG+KIAGTNAEV
Sbjct: 138 TLMGTDGHPFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEV 197
Query: 362 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 541
MPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+S
Sbjct: 198 MPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFS 257
Query: 542 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 721
T MR G+KYIEEAIEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVA
Sbjct: 258 TKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVA 317
Query: 722 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 859
NR ASIRIPR V ++ GY EDRRPS+NCDP+SVTE ++RT +L +
Sbjct: 318 NRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNE 363
>sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammonia ligase)
Length = 392
Score = 432 bits (1110), Expect = e-121
Identities = 189/286 (66%), Positives = 238/286 (83%)
Frame = +2
Query: 2 YLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEY 181
YL PV +F DPF NK+V+CE Y++ ++NLRH+C++ M+ D+ PWFG+EQEY
Sbjct: 78 YLIPVQMFRDPFCLDPNKLVMCEVLKYNRKSAETNLRHTCKKIMEMVNDHRPWFGMEQEY 137
Query: 182 TLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEV 361
TLL I+ +P+ WP+ GFPG QGPYYCGVG +KV+GRD++E+HYKACL+AGIKI GTNAEV
Sbjct: 138 TLLGINGHPYGWPENGFPGPQGPYYCGVGADKVYGRDVVESHYKACLYAGIKICGTNAEV 197
Query: 362 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 541
MP+QWEFQ+GPCEGI++ DHLWMAR++LHRV EDFGVV + DPKP+ G+WNGAG HTNYS
Sbjct: 198 MPSQWEFQVGPCEGIDMGDHLWMARFILHRVCEDFGVVATLDPKPMTGNWNGAGCHTNYS 257
Query: 542 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 721
T MR GG+K+IE+AIEK+ KRH HI YDP G+DN RRLTG+HETS+I +FS+GVA
Sbjct: 258 TESMRVEGGLKHIEDAIEKLGKRHDYHICVYDPRGGKDNSRRLTGQHETSSIHEFSAGVA 317
Query: 722 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 859
NRGASIRIPRQV ++G+GY EDRRP++NCDPY+VTE +VRTTIL +
Sbjct: 318 NRGASIRIPRQVGQEGYGYFEDRRPAANCDPYAVTEALVRTTILNE 363
>sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 432 bits (1110), Expect = e-121
Identities = 193/286 (67%), Positives = 229/286 (80%)
Frame = +2
Query: 2 YLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEY 181
YLHPVA+F DPFR NK+V CE + Y++ P ++NLRHSC+ M HPWFG+EQEY
Sbjct: 78 YLHPVAMFRDPFRRDPNKLVFCEVFKYNRKPAETNLRHSCKRIMDMVSSQHPWFGMEQEY 137
Query: 182 TLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEV 361
TL+ D +PF WP GFPG QGPYYCGVG +K +GRDI+EAHY+ACL+AGIKI GTNAEV
Sbjct: 138 TLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKITGTNAEV 197
Query: 362 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 541
MPAQWEFQIGPCEGI + DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+S
Sbjct: 198 MPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFS 257
Query: 542 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 721
T MR G++ IEEAI+K+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVA
Sbjct: 258 TKAMREENGLRCIEEAIDKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVA 317
Query: 722 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 859
NR ASIRIPR V ++ GY EDRRPS+NCDPY+VTE IVRT +L +
Sbjct: 318 NRSASIRIPRIVGQEKKGYFEDRRPSANCDPYAVTEAIVRTCLLNE 363
>sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 429 bits (1103), Expect = e-120
Identities = 192/286 (67%), Positives = 228/286 (79%)
Frame = +2
Query: 2 YLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEY 181
YL P A+F DPFR NK+VLCE + Y++ D+NLRH+C M + HPWFG+EQEY
Sbjct: 78 YLRPAAMFRDPFRKDPNKLVLCEVFKYNRQSADTNLRHTCRRIMDMVSNQHPWFGMEQEY 137
Query: 182 TLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEV 361
TLL D +PF WP FPG QGPYYCGVG +K +GRDI+EAHY+ACL+AG+KI GTNAEV
Sbjct: 138 TLLGTDGHPFGWPSNCFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGVKIGGTNAEV 197
Query: 362 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 541
MPAQWEFQ+GPCEGI + DHLW+AR++LHRV EDFGV+VSFDPKPI G+WNGAG HTN+S
Sbjct: 198 MPAQWEFQVGPCEGIEMGDHLWIARFILHRVCEDFGVIVSFDPKPIPGNWNGAGCHTNFS 257
Query: 542 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 721
T MR GG+K+IEEAIEK+SKRH HI AYDP G DN RRLTG HETS+I +FS+GVA
Sbjct: 258 TKNMREDGGLKHIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSSIHEFSAGVA 317
Query: 722 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 859
NRGASIRIPR V + GY EDR PS+NCDPY+VTE +VRT +L +
Sbjct: 318 NRGASIRIPRNVGHEKKGYFEDRGPSANCDPYAVTEALVRTCLLNE 363
>sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 429 bits (1103), Expect = e-120
Identities = 190/286 (66%), Positives = 230/286 (80%)
Frame = +2
Query: 2 YLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEY 181
YL P A+F DPFR NK+V CE + Y++ P ++NLRH+C+ M + HPWFG+EQEY
Sbjct: 78 YLVPAAMFRDPFRKDPNKLVFCEVFKYNRKPAETNLRHTCKRIMDMVSNQHPWFGMEQEY 137
Query: 182 TLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEV 361
TL+ D +PF WP GFPG QGPYYCGVG +K +GRDI+EAHY+ACL+AGIKI GTNAEV
Sbjct: 138 TLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKIGGTNAEV 197
Query: 362 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 541
MPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+S
Sbjct: 198 MPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFS 257
Query: 542 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 721
T MR G+KYIEEAIEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVA
Sbjct: 258 TKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNTRRLTGFHETSNINDFSAGVA 317
Query: 722 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 859
NRGASIRIPR ++ GY EDRRPS+NCDP++VTE ++RT +L +
Sbjct: 318 NRGASIRIPRTGGQEKKGYFEDRRPSANCDPFAVTEALIRTCLLNE 363
>sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (Glutamate--ammonia ligase 2)
Length = 369
Score = 426 bits (1094), Expect = e-119
Identities = 189/286 (66%), Positives = 232/286 (81%)
Frame = +2
Query: 2 YLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEY 181
YL+PVA++ DPFR +N +V+C+TY +D TP D+N R +C E PWFGIEQEY
Sbjct: 84 YLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCLEVANKCAAEEPWFGIEQEY 143
Query: 182 TLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEV 361
T LD D +P WPK GFPG QGPYYCGVG NKV+ RDI++AHY+ACL+AGIK++GTNAEV
Sbjct: 144 TFLDFDGHPLGWPKNGFPGPQGPYYCGVGANKVYARDIVDAHYRACLYAGIKVSGTNAEV 203
Query: 362 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 541
MPAQWEFQ+GPCEGI++ D LWMAR+LLHR++E+FG+V + DPKP+ GDWNGAGAHTN S
Sbjct: 204 MPAQWEFQVGPCEGISIGDDLWMARFLLHRISEEFGIVSTLDPKPMPGDWNGAGAHTNVS 263
Query: 542 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 721
T MR GGI+ IE+A+ K+SK H HI AYDP +G+DN RRLTG+HETS+I+DFS+GVA
Sbjct: 264 TKAMREDGGIRDIEKAVAKLSKCHERHIRAYDPKQGQDNARRLTGKHETSSINDFSAGVA 323
Query: 722 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 859
NRG SIRIPR V++DG GY EDRRPSSNCDPYSV E I+RT L++
Sbjct: 324 NRGCSIRIPRGVNDDGKGYFEDRRPSSNCDPYSVVEAILRTICLDE 369
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,661,504
Number of Sequences: 369166
Number of extensions: 2291396
Number of successful extensions: 6452
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6272
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9558791870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)