Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_G09
(773 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q01105|SET_HUMAN SET protein (Phosphatase 2A inhibitor I... 75 2e-13
sp|Q9EQU5|SET_MOUSE SET protein (Phosphatase 2A inhibitor I... 75 2e-13
sp|Q63945|SET_RAT SET protein (Phosphatase 2A inhibitor I2P... 75 2e-13
sp|P53997|SET_DROME SET protein 70 5e-12
sp|Q18240|SPR2_CAEEL Suppressor of presenilin 2 70 8e-12
sp|Q9H0U9|TSYL1_HUMAN Testis-specific Y-encoded-like protei... 55 3e-07
sp|O88852|TSYL1_MOUSE Testis-specific Y-encoded-like protei... 54 4e-07
sp|P13825|ASP_PLAFS Aspartic acid-rich protein precursor 53 1e-06
sp|Q9UJ04|TSYL4_HUMAN Testis-specific Y-encoded-like protei... 48 3e-05
sp|Q9H489|TSY3_HUMAN Testis-specific Y-encoded-like protein... 47 8e-05
>sp|Q01105|SET_HUMAN SET protein (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)
(Template-activating factor I) (TAF-I) (HLA-DR
associated protein II) (PHAPII) (Inhibitor of granzyme
A-activated DNase) (IGAAD)
Length = 290
Score = 75.5 bits (184), Expect = 2e-13
Identities = 39/96 (40%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +3
Query: 15 FSPNEYFNNTTITKSIHVGES-EIKTTCDPVDWKEGKNFVKSLNESLNXXXXXXXXXXXX 191
F N YF N ++K H+ ES + + + WK GK+ K +++ N
Sbjct: 141 FDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEE-- 198
Query: 192 PISFMQWFTSDIANSMVELGEVIKDDLWPNPLQYYL 299
P SF WFT ELGEVIKDD+WPNPLQYYL
Sbjct: 199 PESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYL 234
>sp|Q9EQU5|SET_MOUSE SET protein (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)
(Template-activating factor I) (TAF-I)
Length = 289
Score = 75.5 bits (184), Expect = 2e-13
Identities = 39/96 (40%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +3
Query: 15 FSPNEYFNNTTITKSIHVGES-EIKTTCDPVDWKEGKNFVKSLNESLNXXXXXXXXXXXX 191
F N YF N ++K H+ ES + + + WK GK+ K +++ N
Sbjct: 140 FDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEE-- 197
Query: 192 PISFMQWFTSDIANSMVELGEVIKDDLWPNPLQYYL 299
P SF WFT ELGEVIKDD+WPNPLQYYL
Sbjct: 198 PESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYL 233
>sp|Q63945|SET_RAT SET protein (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)
(Template-activating factor I) (TAF-I) (Liver
regeneration-related protein LRRGR00002)
Length = 289
Score = 75.5 bits (184), Expect = 2e-13
Identities = 39/96 (40%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +3
Query: 15 FSPNEYFNNTTITKSIHVGES-EIKTTCDPVDWKEGKNFVKSLNESLNXXXXXXXXXXXX 191
F N YF N ++K H+ ES + + + WK GK+ K +++ N
Sbjct: 140 FDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEE-- 197
Query: 192 PISFMQWFTSDIANSMVELGEVIKDDLWPNPLQYYL 299
P SF WFT ELGEVIKDD+WPNPLQYYL
Sbjct: 198 PESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYL 233
>sp|P53997|SET_DROME SET protein
Length = 269
Score = 70.5 bits (171), Expect = 5e-12
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Frame = +3
Query: 15 FSPNEYFNNTTITKSIHVGESEIK-------TTCDPVDWKEGKNFVKSLNESLNXXXXXX 173
F N YF N +TK H+ + +T P+ WKEGKN +K L L
Sbjct: 129 FDENPYFENKVLTKEFHLNSAAASENGDWPASTSTPIKWKEGKNLLKLL---LTKPYGNK 185
Query: 174 XXXXXXPISFMQWFTSDIANSMVELGEVIKDDLWPNPLQYYL 299
+F WF+ + E+ E+IKDDLWPNPLQYYL
Sbjct: 186 KKRNSEYKTFFDWFSDNTDPVNDEIAELIKDDLWPNPLQYYL 227
>sp|Q18240|SPR2_CAEEL Suppressor of presenilin 2
Length = 312
Score = 69.7 bits (169), Expect = 8e-12
Identities = 38/99 (38%), Positives = 47/99 (47%)
Frame = +3
Query: 3 IIMTFSPNEYFNNTTITKSIHVGESEIKTTCDPVDWKEGKNFVKSLNESLNXXXXXXXXX 182
IIMTF PNEYF N ITKS H+ T ++WKE K
Sbjct: 123 IIMTFDPNEYFTNEVITKSYHLQSESPSTEITEIEWKENKK-------------PPFPED 169
Query: 183 XXXPISFMQWFTSDIANSMVELGEVIKDDLWPNPLQYYL 299
+F++W T E+ EVIKDDL+ NPLQYY+
Sbjct: 170 GDSAHTFLEWLTYAALPDSDEIAEVIKDDLYVNPLQYYV 208
>sp|Q9H0U9|TSYL1_HUMAN Testis-specific Y-encoded-like protein 1 (TSPY-like 1)
Length = 438
Score = 54.7 bits (130), Expect = 3e-07
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +3
Query: 15 FSPNEYFNNTTITKSIHVGES-EIKTTCDPVDWKEG---KNFVKSLNESLNXXXXXXXXX 182
F N YF N I K V S + + P+ W+ G ++F++ + +
Sbjct: 326 FRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLI---------- 375
Query: 183 XXXPISFMQWFTSDIANSMVELGEVIKDDLWPNPLQYYL 299
SF WF+ ++ E+IK+DLWPNPLQYYL
Sbjct: 376 ----CSFFTWFSDHSLPESDKIAEIIKEDLWPNPLQYYL 410
>sp|O88852|TSYL1_MOUSE Testis-specific Y-encoded-like protein 1 (TSPY-like 1)
Length = 379
Score = 54.3 bits (129), Expect = 4e-07
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 15 FSPNEYFNNTTITKSIHVGES-EIKTTCDPVDWKEG---KNFVKSLNESLNXXXXXXXXX 182
F N YF N I K V S + + P+ W+ G ++F++ + +
Sbjct: 267 FRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLI---------- 316
Query: 183 XXXPISFMQWFTSDIANSMVELGEVIKDDLWPNPLQYYL 299
SF WF+ + E+IK+DLWPNPLQYYL
Sbjct: 317 ----CSFFTWFSDHSLPESDRIAEIIKEDLWPNPLQYYL 351
>sp|P13825|ASP_PLAFS Aspartic acid-rich protein precursor
Length = 253
Score = 52.8 bits (125), Expect = 1e-06
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +3
Query: 27 EYFNNTTITKSIHVGESEIKTT-CDPVDWKEGKNFVKSLNESLNXXXXXXXXXXXXPISF 203
E+ T+ K + ++ K C + WKEGKN + ++ + + S
Sbjct: 115 EFMEPLTLVKHVTFDNNQEKVVECTRIKWKEGKNPIAAVTHNRSDLDNEIPKW-----SI 169
Query: 204 MQWFTSDIANSMVELGEVIKDDLWPNPLQYYLAV 305
+WFT+D ++GE+I+ ++W NPL YYL +
Sbjct: 170 FEWFTTDELQDKPDVGELIRREIWHNPLSYYLGL 203
>sp|Q9UJ04|TSYL4_HUMAN Testis-specific Y-encoded-like protein 4 (TSPY-like 4)
Length = 414
Score = 47.8 bits (112), Expect = 3e-05
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +3
Query: 15 FSPNEYFNNTTITKSIHVGES-EIKTTCDPVDWKEGKNFVKSLNESLNXXXXXXXXXXXX 191
F N YF N + K S + + P+ W G++ ++ +
Sbjct: 300 FQGNPYFRNEGLVKEYERRSSGRVVSLSTPIRWHRGQDPQAHIHRNREGNTIP------- 352
Query: 192 PISFMQWFTSDIANSMVELGEVIKDDLWPNPLQYYL 299
SF WF+ + E+IK +LWPNPLQYYL
Sbjct: 353 --SFFNWFSDHSLLEFDRIAEIIKGELWPNPLQYYL 386
>sp|Q9H489|TSY3_HUMAN Testis-specific Y-encoded-like protein 3 (TSPY-like 3)
Length = 355
Score = 46.6 bits (109), Expect = 8e-05
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +3
Query: 15 FSPNEYFNNTTITKSIHVGES-EIKTTCDPVDWKEGKNFVKSLNESLNXXXXXXXXXXXX 191
F N YF N I K S + + + W G+ ++ + +
Sbjct: 242 FWSNPYFQNKVIVKEYECRASGRVVSIATRIRWHWGQEPPALVHRNRDTVR--------- 292
Query: 192 PISFMQWFTSDIANSMVELGEVIKDDLWPNPLQYYL 299
SF WF+ + ++IKDDLWPNPLQYYL
Sbjct: 293 --SFFSWFSQHSLPEADRVAQIIKDDLWPNPLQYYL 326
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,577,577
Number of Sequences: 369166
Number of extensions: 1246833
Number of successful extensions: 2425
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2410
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7212136400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)