Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_F04
(264 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9NQQ7|S35C2_HUMAN Solute carrier family 35 member C2 (O... 57 1e-08
sp|Q8VCX2|S35C2_MOUSE Solute carrier family 35 member C2 (O... 57 1e-08
sp|Q10354|YDB1_SCHPO Hypothetical protein C22E12.01 in chro... 36 0.024
sp|Q8CD26|SL35E_MOUSE Solute carrier family 35 member E1 29 2.9
sp|P45178|GLGX_HAEIN Glycogen operon protein glgX homolog 29 2.9
sp|Q14916|NPT1_HUMAN Renal sodium-dependent phosphate trans... 28 4.9
sp|Q9Z2J0|S23A1_MOUSE Solute carrier family 23 member 1 (So... 28 6.4
sp|Q92KX2|ACS2_RHIME Acetyl-coenzyme A synthetase 2 (Acetat... 28 6.4
sp|Q8UBV5|ACSA_AGRT5 Acetyl-coenzyme A synthetase (Acetate-... 28 6.4
sp|Q9WTW7|S23A1_RAT Solute carrier family 23 member 1 (Sodi... 28 8.4
>sp|Q9NQQ7|S35C2_HUMAN Solute carrier family 35 member C2 (Ovarian cancer overexpressed
gene 1 protein)
Length = 365
Score = 57.0 bits (136), Expect = 1e-08
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = +1
Query: 1 VSRTSSLTLCISGIIKEITLLGLAVKINKDEMNAINILGLIFCLLGITLHVIIKFRNS 174
VSRTSSLTL I+GI KE+ L LA + D+++ +N LG CL GI+LHV +K +S
Sbjct: 264 VSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHS 321
>sp|Q8VCX2|S35C2_MOUSE Solute carrier family 35 member C2 (Ovarian cancer overexpressed
gene 1 protein)
Length = 364
Score = 57.0 bits (136), Expect = 1e-08
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = +1
Query: 1 VSRTSSLTLCISGIIKEITLLGLAVKINKDEMNAINILGLIFCLLGITLHVIIKFRNS 174
VSRTSSLTL I+GI KE+ L LA + D+++ +N LG CL GI+LHV +K +S
Sbjct: 264 VSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHS 321
>sp|Q10354|YDB1_SCHPO Hypothetical protein C22E12.01 in chromosome I
Length = 374
Score = 36.2 bits (82), Expect = 0.024
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +1
Query: 1 VSRTSSLTLCISGIIKEITLLGLAVKINKDEMNAINILGLIFCLLGITLH 150
+ +TS +TL + GI+KEI + + D + INI+GL+ L GI ++
Sbjct: 299 IQKTSIVTLSVCGILKEIITIIASTLFYHDILLPINIVGLVITLCGIGVY 348
>sp|Q8CD26|SL35E_MOUSE Solute carrier family 35 member E1
Length = 265
Score = 29.3 bits (64), Expect = 2.9
Identities = 15/68 (22%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 13 SSLTLCISGIIKEITLLGLAVKINKDEMNAINILGLIFCLLGITLHVIIKF-RNSDEIQN 189
S L+ ++ K I ++ +++ + ++ + + N+LG++ +LG+ L+ K+ N ++
Sbjct: 143 SPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARRH 202
Query: 190 IPPIELSE 213
+ PI S+
Sbjct: 203 LLPISTSD 210
>sp|P45178|GLGX_HAEIN Glycogen operon protein glgX homolog
Length = 659
Score = 29.3 bits (64), Expect = 2.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 6 QNIKSHVVYIRNYKGNYFTWTGCKN 80
+ I Y RN +G Y WTGC N
Sbjct: 277 RGIDDQTYYWRNDQGRYINWTGCGN 301
>sp|Q14916|NPT1_HUMAN Renal sodium-dependent phosphate transport protein 1
(Sodium/phosphate cotransporter 1) (Na(+)/PI
cotransporter 1) (Renal sodium-phosphate transport
protein 1) (Renal Na(+)-dependent phosphate
cotransporter 1) (Solute carrier family 18 member 1)
(NA/PI-4)
Length = 465
Score = 28.5 bits (62), Expect = 4.9
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Frame = +1
Query: 1 VSRTSSLTLCISGIIKEITLLGLAVKINKDE--------MNAINILGLIFCLLGITLHV 153
+ S+LT I G+I TL GL +K + + M AIN+ GLIF L+ T +
Sbjct: 396 IKACSTLTGMIGGLIAS-TLTGLILKQDPESAWFKTFILMAAINVTGLIFYLIVATAEI 453
>sp|Q9Z2J0|S23A1_MOUSE Solute carrier family 23 member 1 (Sodium-dependent vitamin C
transporter 1) (Na(+)/L-ascorbic acid transporter 1)
(Yolk sac permease-like molecule 3)
Length = 605
Score = 28.1 bits (61), Expect = 6.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 28 CISGIIKEITLLGLAVKINKDEMNAINILGLIFCLLGIT 144
C SG I LL A+ + +D+ ++G IF +GIT
Sbjct: 62 CFSGTIAVPFLLAEALCVGRDQHMVSQLIGTIFTCVGIT 100
>sp|Q92KX2|ACS2_RHIME Acetyl-coenzyme A synthetase 2 (Acetate--CoA ligase 2)
(Acyl-activating enzyme 2)
Length = 649
Score = 28.1 bits (61), Expect = 6.4
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 30 YIRNYKGNYFTWTGCKN*QRRDERHKY 110
Y YKG YFT GC RRDE Y
Sbjct: 488 YFSTYKGKYFTGDGC----RRDEDGYY 510
>sp|Q8UBV5|ACSA_AGRT5 Acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating
enzyme)
Length = 651
Score = 28.1 bits (61), Expect = 6.4
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 30 YIRNYKGNYFTWTGCKN*QRRDERHKY 110
Y YKG YFT GC RRDE Y
Sbjct: 488 YFSTYKGKYFTGDGC----RRDEDGYY 510
>sp|Q9WTW7|S23A1_RAT Solute carrier family 23 member 1 (Sodium-dependent vitamin C
transporter 1) (Na(+)/L-ascorbic acid transporter 1)
Length = 604
Score = 27.7 bits (60), Expect = 8.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 28 CISGIIKEITLLGLAVKINKDEMNAINILGLIFCLLGIT 144
C SG I LL A+ + +D+ ++G IF +GIT
Sbjct: 62 CFSGTIAVPFLLAEALCVGRDQHMISQLIGTIFTCVGIT 100
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,443,281
Number of Sequences: 369166
Number of extensions: 428955
Number of successful extensions: 1057
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 68,354,980
effective HSP length: 58
effective length of database: 57,640,350
effective search space used: 1671570150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)