Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_E11
(636 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q91055|HELO_HELHO Helothermine precursor (HLTx) 119 8e-27
sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1... 118 1e-26
sp|P16562|CRIS2_HUMAN Cysteine-rich secretory protein 2 pre... 115 1e-25
sp|Q60477|CRIS2_CAVPO Cysteine-rich secretory protein 2 pre... 115 1e-25
sp|P60623|CRVP_TRIST Cysteine-rich secretory protein precur... 112 6e-25
sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 pre... 110 2e-24
sp|P54108|CRIS3_HUMAN Cysteine-rich secretory protein 3 pre... 109 5e-24
sp|P16563|CRIS2_MOUSE Cysteine-rich secretory protein 2 pre... 108 1e-23
sp|Q9CWG1|GLIP1_MOUSE Glioma pathogenesis-related protein 1... 108 1e-23
sp|Q8JGT9|CRVP_RHATT Tigrin precursor 108 1e-23
>sp|Q91055|HELO_HELHO Helothermine precursor (HLTx)
Length = 242
Score = 119 bits (297), Expect = 8e-27
Identities = 65/168 (38%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Frame = +2
Query: 2 MVWSDELAETAERSGNKCVFEHDSDSERATRSFPDAGQNIYAGWEPKA---AVQMWFDEH 172
M WS+++A+ A+RS N+C EH S ER T + G+N++ P A+Q WFDE
Sbjct: 60 MTWSNKIAQNAQRSANQCTLEHTSKEER-TIDGVECGENLFFSSAPYTWSYAIQNWFDER 118
Query: 173 K--DYTYQNEDCNGVCGHYTQVAWANSYAVGCASVHCERRNGFQYKYFVICNYGPAGNYM 346
K + Y N + GHYTQV W SY +GCA +C + YKY+ +C Y P GN
Sbjct: 119 KYFRFNYGPTAQNVMIGHYTQVVWYRSYELGCAIAYCPDQP--TYKYYQVCQYCPGGNIR 176
Query: 347 GEK--PYSAGEPCSKCPSGSTCNDGLCSKSGSGNKI-NTLPKQEEKTG 481
K PYS G PC CP C++GLC+ N + N P +++ G
Sbjct: 177 SRKYTPYSIGPPCGDCP--DACDNGLCTNPCKQNDVYNNCPDLKKQVG 222
>sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1 precursor (GliPR 1) (RTVP-1
protein)
Length = 266
Score = 118 bits (295), Expect = 1e-26
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 10/150 (6%)
Frame = +2
Query: 2 MVWSDELAETAERSGNKCVFEHDS---DSERATRSFPDAGQNIYAGWEP----KAAVQMW 160
M W LA+ A+ + C F H++ + +F G+NI+ G P +A+ W
Sbjct: 58 MTWDPALAQIAKAWASNCQFSHNTRLKPPHKLHPNFTSLGENIWTGSVPIFSVSSAITNW 117
Query: 161 FDEHKDYTYQNEDCNGVCGHYTQVAWANSYAVGCASVHCERRNGF---QYKYFVICNYGP 331
+DE +DY ++ C VCGHYTQV WA+SY VGCA C + +GF ICNYGP
Sbjct: 118 YDEIQDYDFKTRICKKVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGP 177
Query: 332 AGNYMGEKPYSAGEPCSKCPSGSTCNDGLC 421
GNY PY G CS CP+ C D LC
Sbjct: 178 GGNY-PTWPYKRGATCSACPNNDKCLDNLC 206
>sp|P16562|CRIS2_HUMAN Cysteine-rich secretory protein 2 precursor (CRISP-2)
(Testis-specific protein TPX-1)
Length = 243
Score = 115 bits (287), Expect = 1e-25
Identities = 58/150 (38%), Positives = 82/150 (54%), Gaps = 7/150 (4%)
Frame = +2
Query: 2 MVWSDELAETAERSGNKCVFEHDSDSERATRSFPDAGQNIYAGWEP---KAAVQMWFDEH 172
M WS E+ A+R NKC +H +R T + G+N+Y +P +A+Q W+DE
Sbjct: 61 MEWSREVTTNAQRWANKCTLQHSDPEDRKTST--RCGENLYMSSDPTSWSSAIQSWYDEI 118
Query: 173 KDYTYQ--NEDCNGVCGHYTQVAWANSYAVGCASVHCERRNGFQYKYFVICNYGPAGNYM 346
D+ Y + N V GHYTQ+ W ++Y VGC +C ++ KY+ +C Y PAGN M
Sbjct: 119 LDFVYGVGPKSPNAVVGHYTQLVWYSTYQVGCGIAYCPNQDSL--KYYYVCQYCPAGNNM 176
Query: 347 GEK--PYSAGEPCSKCPSGSTCNDGLCSKS 430
K PY G PC+ CP C+ GLC+ S
Sbjct: 177 NRKNTPYQQGTPCAGCP--DDCDKGLCTNS 204
>sp|Q60477|CRIS2_CAVPO Cysteine-rich secretory protein 2 precursor (CRISP-2)
(Testis-specific protein TPX-1) (Autoantigen 1) (25 kDa
acrosomal autoantigen) (AA1)
Length = 244
Score = 115 bits (287), Expect = 1e-25
Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 7/150 (4%)
Frame = +2
Query: 2 MVWSDELAETAERSGNKCVFEHDSDSERATRSFPDAGQNIYAGWEPKA---AVQMWFDEH 172
M WS E A A++ N+C H + +R T + G+N+Y +P + A+Q WFDE
Sbjct: 62 MEWSREAAVNAQKWANRCTLVHSNPDDRKTST--KCGENLYMSSDPSSWSDAIQSWFDES 119
Query: 173 KDYTYQ--NEDCNGVCGHYTQVAWANSYAVGCASVHCERRNGFQYKYFVICNYGPAGN-- 340
+D+T+ + N V GHYTQ+ W +SY VGC +C ++ KY+ +C Y PAGN
Sbjct: 120 QDFTFGVGPKSHNAVVGHYTQLVWYSSYLVGCGIAYCPNQDSL--KYYYVCQYCPAGNNV 177
Query: 341 YMGEKPYSAGEPCSKCPSGSTCNDGLCSKS 430
Y PY G PC+ CP C +GLC+ S
Sbjct: 178 YTKNTPYKQGIPCASCP--GHCENGLCTNS 205
>sp|P60623|CRVP_TRIST Cysteine-rich secretory protein precursor (Stecrisp)
Length = 233
Score = 112 bits (281), Expect = 6e-25
Identities = 58/148 (39%), Positives = 79/148 (53%), Gaps = 7/148 (4%)
Frame = +2
Query: 2 MVWSDELAETAERSGNKCVFEHDSDSERATRSFPDAGQNIYAGWEPKA---AVQMWFDEH 172
M W E A+ AER +C+ H S R G+NIY P + W DE+
Sbjct: 51 MEWYPEAADNAERWAYRCIESHSSYESRVIEGIK-CGENIYMSPYPMKWTDIIHAWHDEY 109
Query: 173 KDYTYQ--NEDCNGVCGHYTQVAWANSYAVGCASVHCERRNGFQYKYFVICNYGPAGNYM 346
KD+ Y + N V GHYTQ+ W SY +GCA+ +C Y YF +C Y PAGN++
Sbjct: 110 KDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCAAAYCP---SSPYSYFFVCQYCPAGNFI 166
Query: 347 GE--KPYSAGEPCSKCPSGSTCNDGLCS 424
G+ PY++G PC CP S C++GLC+
Sbjct: 167 GKTATPYTSGTPCGDCP--SDCDNGLCT 192
>sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 precursor (CRISP-3)
Length = 245
Score = 110 bits (276), Expect = 2e-24
Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 7/150 (4%)
Frame = +2
Query: 2 MVWSDELAETAERSGNKCVFEHDSDSERATRSFPDAGQNIYAGWEPKA---AVQMWFDEH 172
M W + A A+ NKC+ +H +RA + G+N++ P + A+Q W DE
Sbjct: 62 MQWDSKTATNAQNWANKCLLQHSKAEDRAVGTMK-CGENLFMSSIPNSWSDAIQNWHDEV 120
Query: 173 KDYTYQ--NEDCNGVCGHYTQVAWANSYAVGCASVHCERRNGFQYKYFVICNYGPAGNYM 346
D+ Y + N V GHYTQV W +SY VGC +C ++ KY+ +C Y PAGNY+
Sbjct: 121 HDFKYGVGPKTPNAVVGHYTQVVWYSSYRVGCGIAYCPKQG--TLKYYYVCQYCPAGNYV 178
Query: 347 GE--KPYSAGEPCSKCPSGSTCNDGLCSKS 430
+ PY G PC++CP C++GLC+ S
Sbjct: 179 NKINTPYEQGTPCARCP--GNCDNGLCTNS 206
>sp|P54108|CRIS3_HUMAN Cysteine-rich secretory protein 3 precursor (CRISP-3) (SGP28
protein)
Length = 245
Score = 109 bits (273), Expect = 5e-24
Identities = 57/150 (38%), Positives = 81/150 (54%), Gaps = 9/150 (6%)
Frame = +2
Query: 2 MVWSDELAETAERSGNKCVFEHDSDSERATRSFPDAGQNIY-----AGWEPKAAVQMWFD 166
M W+ E A A++ N+C + H + +R T G+N+Y + W A+Q WFD
Sbjct: 63 MEWNKEAAANAQKWANQCNYRHSNPKDRMTSL--KCGENLYMSSASSSWSQ--AIQSWFD 118
Query: 167 EHKDYTYQ--NEDCNGVCGHYTQVAWANSYAVGCASVHCERRNGFQYKYFVICNYGPAGN 340
E+ D+ + + N V GHYTQV W +SY VGC + +C N KY+ +C Y PAGN
Sbjct: 119 EYNDFDFGVGPKTPNAVVGHYTQVVWYSSYLVGCGNAYCP--NQKVLKYYYVCQYCPAGN 176
Query: 341 YMGE--KPYSAGEPCSKCPSGSTCNDGLCS 424
+ PY G PC+ CP C+DGLC+
Sbjct: 177 WANRLYVPYEQGAPCASCP--DNCDDGLCT 204
>sp|P16563|CRIS2_MOUSE Cysteine-rich secretory protein 2 precursor (CRISP-2)
(Testis-specific protein TPX-1)
Length = 243
Score = 108 bits (270), Expect = 1e-23
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Frame = +2
Query: 2 MVWSDELAETAERSGNKCVFEHDSDSERATRSFPDAGQNIYAGWEP---KAAVQMWFDEH 172
M WS + A++ NKC+ EH S +R G+N+Y +P +Q W++E+
Sbjct: 62 MEWSIQATTNAQKWANKCILEHSSKDDRKINI--RCGENLYMSTDPTLWSTVIQSWYNEN 119
Query: 173 KDYTYQ-NEDCNGVCGHYTQVAWANSYAVGCASVHCERRNGFQYKYFVICNYGPAGNYMG 349
+D+ Y N GHYTQ+ W +S+ +GC +C ++ KYF +C+Y P GN +
Sbjct: 120 EDFVYGVGAKPNSAVGHYTQLVWYSSFKIGCGIAYCPNQDNL--KYFYVCHYCPMGNNVM 177
Query: 350 EK--PYSAGEPCSKCPSGSTCNDGLCSKS 430
+K PY G PC+ CP + C +GLC+ S
Sbjct: 178 KKSTPYQQGTPCASCP--NNCENGLCTNS 204
>sp|Q9CWG1|GLIP1_MOUSE Glioma pathogenesis-related protein 1 precursor (GliPR 1)
Length = 255
Score = 108 bits (269), Expect = 1e-23
Identities = 56/145 (38%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Frame = +2
Query: 2 MVWSDELAETAERSGNKCVFEHDSD-SERATRSFPDAGQNIYAG----WEPKAAVQMWFD 166
M W +LA+ A+ C F+H+ R +F G+NI+ G + +A+ W++
Sbjct: 58 MSWDPKLAQIAKAWTKSCEFKHNPQLHSRIHPNFTALGENIWLGSLSIFSVSSAISAWYE 117
Query: 167 EHKDYTYQNEDCNGVCGHYTQVAWANSYAVGCASVHCERRNGFQYKYFVICNYGPAGNYM 346
E K Y + C VCGHYTQV WA+SY +GCA C F IC+YGPAGNY
Sbjct: 118 EIKHYDFSTRKCRHVCGHYTQVVWADSYKLGCAVQLCPNGANF------ICDYGPAGNY- 170
Query: 347 GEKPYSAGEPCSKCPSGSTCNDGLC 421
PY G CS CP C + LC
Sbjct: 171 PTWPYKQGATCSDCPKDDKCLNSLC 195
>sp|Q8JGT9|CRVP_RHATT Tigrin precursor
Length = 237
Score = 108 bits (269), Expect = 1e-23
Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 7/148 (4%)
Frame = +2
Query: 2 MVWSDELAETAERSGNKCVFEHDSDSERATRSFPDAGQNIYAGWEPKA---AVQMWFDEH 172
M W E A AER +C ++H S R G+NI+ +P A +Q W+DE+
Sbjct: 57 MEWYSEAASNAERWAYQCAYDHSPRSSRILNGI-QCGENIFMASDPWAWTSIIQDWYDEY 115
Query: 173 KDYTYQ--NEDCNGVCGHYTQVAWANSYAVGCASVHCERRNGFQYKYFVICNYGPAGNYM 346
+++ Y + V GHYTQ+ W SY VGCA+ +C Y YF +C Y PAGN
Sbjct: 116 RNFVYGVGANPPDSVTGHYTQIVWYKSYLVGCAAAYCP---SSLYNYFYVCQYCPAGNIQ 172
Query: 347 G--EKPYSAGEPCSKCPSGSTCNDGLCS 424
G PY++G C+ CP S C++GLC+
Sbjct: 173 GSTSTPYASGPTCADCP--SNCDNGLCT 198
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,276,821
Number of Sequences: 369166
Number of extensions: 1527387
Number of successful extensions: 4836
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4629
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5121172350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)