Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_D23
(511 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 135 7e-32
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 135 7e-32
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 135 7e-32
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 132 5e-31
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 131 8e-31
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 131 1e-30
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 130 2e-30
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 129 3e-30
sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (He... 129 4e-30
sp|P17156|HSP72_MOUSE Heat shock-related 70 kDa protein 2 (... 129 4e-30
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 135 bits (339), Expect = 7e-32
Identities = 68/138 (49%), Positives = 86/138 (62%)
Frame = +1
Query: 1 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRK 180
RLSK+DIERMV ++++KNSLESYA+ MKATVEDEKL+ KI++ D++
Sbjct: 509 RLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQ 568
Query: 181 LIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXX 360
I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 569 KILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGG 628
Query: 361 XXXXXXXXKQGPTVEEVD 414
GPT+EEVD
Sbjct: 629 GAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 135 bits (339), Expect = 7e-32
Identities = 68/138 (49%), Positives = 86/138 (62%)
Frame = +1
Query: 1 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRK 180
RLSK+DIERMV ++++KNSLESYA+ MKATVEDEKL+ KI++ D++
Sbjct: 509 RLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQ 568
Query: 181 LIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXX 360
I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 569 KILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGG 628
Query: 361 XXXXXXXXKQGPTVEEVD 414
GPT+EEVD
Sbjct: 629 GAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 135 bits (339), Expect = 7e-32
Identities = 68/138 (49%), Positives = 86/138 (62%)
Frame = +1
Query: 1 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRK 180
RLSK+DIERMV ++++KNSLESYA+ MKATVEDEKL+ KI++ D++
Sbjct: 509 RLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQ 568
Query: 181 LIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXX 360
I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 569 KILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGG 628
Query: 361 XXXXXXXXKQGPTVEEVD 414
GPT+EEVD
Sbjct: 629 GAPPSGGASSGPTIEEVD 646
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 132 bits (332), Expect = 5e-31
Identities = 69/141 (48%), Positives = 86/141 (60%), Gaps = 3/141 (2%)
Frame = +1
Query: 1 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRK 180
RLSK+DIERMV +++AKN LESYA+ MK+TVEDEKLK KIS+ D++
Sbjct: 509 RLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQ 568
Query: 181 LIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXXXXXXXXXXXX 351
I+DKC E IGWLDKNQ A ++EF++ KELEKVCNPI+TK+YQ
Sbjct: 569 KILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPEGMPGG 628
Query: 352 XXXXXXXXXXXKQGPTVEEVD 414
GPT+EEVD
Sbjct: 629 FPGAGAAPGGGSSGPTIEEVD 649
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 131 bits (330), Expect = 8e-31
Identities = 71/138 (51%), Positives = 83/138 (60%)
Frame = +1
Query: 1 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRK 180
RLSKD+IERMV RIAAKN+LESYA+ MK T+EDEKLKDKISE D+K
Sbjct: 508 RLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEKLKDKISEEDKK 567
Query: 181 LIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXX 360
I +KC E + WLD NQ A KDEF++ KELE VCNPI+TK+YQ
Sbjct: 568 KIQEKCDETVRWLDGNQTAEKDEFEHRQKELESVCNPIITKLYQSAGGMPGGMPGGMPGG 627
Query: 361 XXXXXXXXKQGPTVEEVD 414
GPT+EEVD
Sbjct: 628 APGAGSTG-GGPTIEEVD 644
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 131 bits (329), Expect = 1e-30
Identities = 68/143 (47%), Positives = 87/143 (60%), Gaps = 5/143 (3%)
Frame = +1
Query: 1 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRK 180
RLSK+DIERMV ++++KNSLESYA+ MK+TVEDEKL+ KIS+ D+
Sbjct: 509 RLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKT 568
Query: 181 LIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ-----XXXXXXXXXXX 345
I++KC E IGWLDKNQ A K+E+++H KELEKVCNPI+TK+YQ
Sbjct: 569 KILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMPGGMPEGMAGG 628
Query: 346 XXXXXXXXXXXXXKQGPTVEEVD 414
GPT+EEVD
Sbjct: 629 FPGAGGAAPGGGGSSGPTIEEVD 651
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 130 bits (327), Expect = 2e-30
Identities = 68/138 (49%), Positives = 84/138 (60%)
Frame = +1
Query: 1 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRK 180
RLSKDDI+RMV R+AAKN+LESY Y +K TVEDEKL+ KISE D+
Sbjct: 512 RLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYTYNIKQTVEDEKLRGKISEQDKN 571
Query: 181 LIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXX 360
I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 572 KILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ----------GGPGGG 621
Query: 361 XXXXXXXXKQGPTVEEVD 414
GPT+EEVD
Sbjct: 622 SGGGGSGASGGPTIEEVD 639
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 129 bits (325), Expect = 3e-30
Identities = 68/141 (48%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Frame = +1
Query: 1 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRK 180
RLSK+DIERMV +++AKN LESYA+ MK+TVEDEKLK KIS+ D+
Sbjct: 509 RLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKH 568
Query: 181 LIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXXXXXXXXXXXX 351
I+DKC E I WLDKNQ A KDE+++ K+LEKVCNPI+TK+YQ
Sbjct: 569 KILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQSDGGMPGGMPDGMPGG 628
Query: 352 XXXXXXXXXXXKQGPTVEEVD 414
GPT+EEVD
Sbjct: 629 FQELGAAPGGGSSGPTIEEVD 649
>sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
(Testis-specific heat shock protein-related) (HST)
Length = 633
Score = 129 bits (324), Expect = 4e-30
Identities = 67/138 (48%), Positives = 84/138 (60%)
Frame = +1
Query: 1 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRK 180
RLSKDDI+RMV R+AAKN++ESY Y +K TVEDEKL+ KISE D+
Sbjct: 512 RLSKDDIDRMVQEADGYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKN 571
Query: 181 LIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXX 360
I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 572 KILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ---------------- 615
Query: 361 XXXXXXXXKQGPTVEEVD 414
GPT+EEVD
Sbjct: 616 GGPGGGGSSGGPTIEEVD 633
>sp|P17156|HSP72_MOUSE Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
Length = 633
Score = 129 bits (324), Expect = 4e-30
Identities = 67/138 (48%), Positives = 84/138 (60%)
Frame = +1
Query: 1 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRK 180
RLSKDDI+RMV R+AAKN++ESY Y +K TVEDEKL+ KISE D+
Sbjct: 512 RLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKN 571
Query: 181 LIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXX 360
I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 572 KILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ---------------- 615
Query: 361 XXXXXXXXKQGPTVEEVD 414
GPT+EEVD
Sbjct: 616 GGPGGGGSSGGPTIEEVD 633
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,620,508
Number of Sequences: 369166
Number of extensions: 435684
Number of successful extensions: 1649
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3255600150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)