Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_B19
(768 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 338 9e-93
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 338 9e-93
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 338 9e-93
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 338 9e-93
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 336 5e-92
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 333 3e-91
sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (... 332 7e-91
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 331 2e-90
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 330 3e-90
sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein (HS... 328 1e-89
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 338 bits (867), Expect = 9e-93
Identities = 178/228 (78%), Positives = 183/228 (80%)
Frame = +1
Query: 1 TLSSRAQANIEIDSLYEGIDFYTSVTRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSS QA+IEIDSLYEGIDFYTS+TRARFEELNADLFR TL+PVEKALRDAKLDK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIH 332
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENE 684
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKEN+
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENK 500
Score = 54.3 bits (129), Expect = 4e-07
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 674 KKMKITITNDKGRLSKDDIERMVAEAEKYK 763
K+ KITITNDKGRLSK+DIERMV EAEKYK
Sbjct: 497 KENKITITNDKGRLSKEDIERMVQEAEKYK 526
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 338 bits (867), Expect = 9e-93
Identities = 178/228 (78%), Positives = 183/228 (80%)
Frame = +1
Query: 1 TLSSRAQANIEIDSLYEGIDFYTSVTRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSS QA+IEIDSLYEGIDFYTS+TRARFEELNADLFR TL+PVEKALRDAKLDK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIH 332
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENE 684
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKEN+
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENK 500
Score = 54.3 bits (129), Expect = 4e-07
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 674 KKMKITITNDKGRLSKDDIERMVAEAEKYK 763
K+ KITITNDKGRLSK+DIERMV EAEKYK
Sbjct: 497 KENKITITNDKGRLSKEDIERMVQEAEKYK 526
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 338 bits (867), Expect = 9e-93
Identities = 178/228 (78%), Positives = 183/228 (80%)
Frame = +1
Query: 1 TLSSRAQANIEIDSLYEGIDFYTSVTRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSS QA+IEIDSLYEGIDFYTS+TRARFEELNADLFR TL+PVEKALRDAKLDK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIH 332
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENE 684
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKEN+
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENK 500
Score = 54.3 bits (129), Expect = 4e-07
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 674 KKMKITITNDKGRLSKDDIERMVAEAEKYK 763
K+ KITITNDKGRLSK+DIERMV EAEKYK
Sbjct: 497 KENKITITNDKGRLSKEDIERMVQEAEKYK 526
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 338 bits (867), Expect = 9e-93
Identities = 178/228 (78%), Positives = 183/228 (80%)
Frame = +1
Query: 1 TLSSRAQANIEIDSLYEGIDFYTSVTRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSS QA+IEIDSLYEGIDFYTS+TRARFEELNADLFR TL+PVEKALRDAKLDK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIH 332
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENE 684
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKEN+
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENK 500
Score = 54.3 bits (129), Expect = 4e-07
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 674 KKMKITITNDKGRLSKDDIERMVAEAEKYK 763
K+ KITITNDKGRLSK+DIERMV EAEKYK
Sbjct: 497 KENKITITNDKGRLSKEDIERMVQEAEKYK 526
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 336 bits (861), Expect = 5e-92
Identities = 176/228 (77%), Positives = 183/228 (80%)
Frame = +1
Query: 1 TLSSRAQANIEIDSLYEGIDFYTSVTRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSS QA+IEIDSLYEGIDFYTS+TRARFEELNADLFR TL+PVEKALRDAK+DK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQIH 332
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENE 684
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSAV+K TGKEN+
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENK 500
Score = 54.3 bits (129), Expect = 4e-07
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 674 KKMKITITNDKGRLSKDDIERMVAEAEKYK 763
K+ KITITNDKGRLSK+DIERMV EAEKYK
Sbjct: 497 KENKITITNDKGRLSKEDIERMVQEAEKYK 526
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 333 bits (854), Expect = 3e-91
Identities = 173/228 (75%), Positives = 182/228 (79%)
Frame = +1
Query: 1 TLSSRAQANIEIDSLYEGIDFYTSVTRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSS QA+IEIDSLYEGIDFYTS+TRARFEELNADLFR TL+PVEK+LRDAK+DK +H
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKSLRDAKMDKAQVH 332
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENE 684
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSA +K TGKEN+
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGKENK 500
Score = 54.3 bits (129), Expect = 4e-07
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 674 KKMKITITNDKGRLSKDDIERMVAEAEKYK 763
K+ KITITNDKGRLSK+DIERMV EAEKYK
Sbjct: 497 KENKITITNDKGRLSKEDIERMVQEAEKYK 526
>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (Hsc 70-4)
Length = 652
Score = 332 bits (851), Expect = 7e-91
Identities = 173/228 (75%), Positives = 182/228 (79%)
Frame = +1
Query: 1 TLSSRAQANIEIDSLYEGIDFYTSVTRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSS QA+IEIDSL+EGIDFYTS+TRARFEELNADLFRST+EPVEK+LRDAK+DK IH
Sbjct: 273 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKSQIH 332
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPK+QKLLQD FNGKELNKSINPDE IL GDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLL 392
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMT LIKRN YSDNQPGVLIQV+EGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERAMTKD 452
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENE 684
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAVEK T KEN+
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVEKSTNKENK 500
Score = 52.0 bits (123), Expect = 2e-06
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +2
Query: 659 KRELEKKMKITITNDKGRLSKDDIERMVAEAEKYK 763
++ K+ KITITNDKGRLSK++IERMV EAEKY+
Sbjct: 492 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR 526
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 331 bits (848), Expect = 2e-90
Identities = 171/228 (75%), Positives = 185/228 (81%)
Frame = +1
Query: 1 TLSSRAQANIEIDSLYEGIDFYTSVTRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSS +QA+IEIDSL+EGIDFYTS+TRARFEE+ +DLFR TLEPVEKALRDAK+DK IH
Sbjct: 275 TLSSSSQASIEIDSLFEGIDFYTSITRARFEEMCSDLFRGTLEPVEKALRDAKMDKAQIH 334
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
D+VLVGGSTRIPK+QKLLQD FNG+ELNKSINPDE ILSGDKSE VQD
Sbjct: 335 DVVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAIQAAILSGDKSENVQDLL 394
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMTALIKRN YSDNQPGV+IQVYEGERAMTKD
Sbjct: 395 LLDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQPGVMIQVYEGERAMTKD 454
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENE 684
NNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKEN+
Sbjct: 455 NNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENK 502
Score = 52.0 bits (123), Expect = 2e-06
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 674 KKMKITITNDKGRLSKDDIERMVAEAEKYK 763
K+ KITITNDKGRLSK+DIERMV +A+KYK
Sbjct: 499 KENKITITNDKGRLSKEDIERMVQDADKYK 528
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 330 bits (845), Expect = 3e-90
Identities = 170/228 (74%), Positives = 186/228 (81%)
Frame = +1
Query: 1 TLSSRAQANIEIDSLYEGIDFYTSVTRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSS +QA+IEIDSL+EGIDFYT++TRARFEEL ADLFRST++PVEK+LRDAK+DK +H
Sbjct: 274 TLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQVH 333
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPK+QKLL DLF+GKELNKSINPDE ILSGDKSEAVQD
Sbjct: 334 DIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLL 393
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMTALIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 394 LLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKD 453
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENE 684
NNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+N+
Sbjct: 454 NNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNK 501
Score = 55.5 bits (132), Expect = 2e-07
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +2
Query: 674 KKMKITITNDKGRLSKDDIERMVAEAEKYK 763
K+ KITITNDKGRLSKDDIERMV EAEKYK
Sbjct: 498 KQNKITITNDKGRLSKDDIERMVNEAEKYK 527
>sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein (HSP70)
Length = 665
Score = 328 bits (841), Expect = 1e-89
Identities = 170/228 (74%), Positives = 184/228 (80%)
Frame = +1
Query: 1 TLSSRAQANIEIDSLYEGIDFYTSVTRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSS AQANIEIDSL EGIDFYTS+TRARFEEL +DLFRSTL+PVEKALRDAKLDK +H
Sbjct: 275 TLSSSAQANIEIDSLLEGIDFYTSITRARFEELCSDLFRSTLDPVEKALRDAKLDKGAVH 334
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
+IVLVGGSTRIPK+QKLLQD FNG+ELNKSINPDE IL+GDKSEAVQD
Sbjct: 335 EIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILTGDKSEAVQDLL 394
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
G+ETAGGVMTALIKRN YSDNQPGVLIQVYEGERAM +D
Sbjct: 395 LLDVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMKRD 454
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENE 684
NNLLGKFEL+GIPP PRGVPQIEVTFDIDANGILNVSAV+K TGK+N+
Sbjct: 455 NNLLGKFELSGIPPGPRGVPQIEVTFDIDANGILNVSAVDKSTGKQNK 502
Score = 47.8 bits (112), Expect = 3e-05
Identities = 22/31 (70%), Positives = 28/31 (90%)
Frame = +2
Query: 674 KKMKITITNDKGRLSKDDIERMVAEAEKYKK 766
K+ KITIT DKGRLSK++IERMV +AEK+K+
Sbjct: 499 KQNKITITRDKGRLSKEEIERMVNDAEKFKQ 529
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,198,059
Number of Sequences: 369166
Number of extensions: 1366626
Number of successful extensions: 4592
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4059
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7115329200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)