Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_A20
(873 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 414 e-115
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 414 e-115
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 414 e-115
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 412 e-115
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 410 e-114
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 408 e-113
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 404 e-112
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 404 e-112
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 403 e-112
sp|P11503|HSP70_ONCVO Heat shock 70 kDa protein (HSP70) 401 e-111
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 414 bits (1064), Expect = e-115
Identities = 220/289 (76%), Positives = 229/289 (79%)
Frame = +3
Query: 6 RAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDK 185
RAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK
Sbjct: 269 RAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDK 328
Query: 186 HTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAV 365
IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE V
Sbjct: 329 SQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENV 388
Query: 366 QDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERA 545
QD GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERA
Sbjct: 389 QDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERA 448
Query: 546 MTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKG 725
MTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKG
Sbjct: 449 MTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKG 508
Query: 726 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEK 872
RLSK+DIERMV ++++KNSLESYA+ MKATVEDEK
Sbjct: 509 RLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEK 557
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 414 bits (1064), Expect = e-115
Identities = 220/289 (76%), Positives = 229/289 (79%)
Frame = +3
Query: 6 RAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDK 185
RAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK
Sbjct: 269 RAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDK 328
Query: 186 HTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAV 365
IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE V
Sbjct: 329 SQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENV 388
Query: 366 QDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERA 545
QD GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERA
Sbjct: 389 QDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERA 448
Query: 546 MTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKG 725
MTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKG
Sbjct: 449 MTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKG 508
Query: 726 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEK 872
RLSK+DIERMV ++++KNSLESYA+ MKATVEDEK
Sbjct: 509 RLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEK 557
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 414 bits (1064), Expect = e-115
Identities = 220/289 (76%), Positives = 229/289 (79%)
Frame = +3
Query: 6 RAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDK 185
RAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK
Sbjct: 269 RAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDK 328
Query: 186 HTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAV 365
IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE V
Sbjct: 329 SQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENV 388
Query: 366 QDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERA 545
QD GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERA
Sbjct: 389 QDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERA 448
Query: 546 MTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKG 725
MTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKG
Sbjct: 449 MTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKG 508
Query: 726 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEK 872
RLSK+DIERMV ++++KNSLESYA+ MKATVEDEK
Sbjct: 509 RLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEK 557
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 412 bits (1060), Expect = e-115
Identities = 219/289 (75%), Positives = 229/289 (79%)
Frame = +3
Query: 6 RAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDK 185
RAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK
Sbjct: 269 RAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDK 328
Query: 186 HTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAV 365
IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE V
Sbjct: 329 SQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENV 388
Query: 366 QDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERA 545
QD GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERA
Sbjct: 389 QDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERA 448
Query: 546 MTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKG 725
MTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKG
Sbjct: 449 MTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKG 508
Query: 726 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEK 872
RLSK+DIERMV ++++KNSL+SYA+ MKATVEDEK
Sbjct: 509 RLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLKSYAFNMKATVEDEK 557
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 410 bits (1054), Expect = e-114
Identities = 217/289 (75%), Positives = 228/289 (78%)
Frame = +3
Query: 6 RAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDK 185
RAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAK+DK
Sbjct: 269 RAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDK 328
Query: 186 HTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAV 365
IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE V
Sbjct: 329 AQIHDIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENV 388
Query: 366 QDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERA 545
QD GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERA
Sbjct: 389 QDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERA 448
Query: 546 MTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKG 725
MTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSAV+K TGKENKITITNDKG
Sbjct: 449 MTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKG 508
Query: 726 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEK 872
RLSK+DIERMV +++AKN LESYA+ MK+TVEDEK
Sbjct: 509 RLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEK 557
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 408 bits (1048), Expect = e-113
Identities = 214/289 (74%), Positives = 228/289 (78%)
Frame = +3
Query: 6 RAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDK 185
RAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEK+LRDAK+DK
Sbjct: 269 RAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKSLRDAKMDK 328
Query: 186 HTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAV 365
+HDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE V
Sbjct: 329 AQVHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENV 388
Query: 366 QDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERA 545
QD GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERA
Sbjct: 389 QDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERA 448
Query: 546 MTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKG 725
MTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSA +K TGKENKITITNDKG
Sbjct: 449 MTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGKENKITITNDKG 508
Query: 726 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEK 872
RLSK+DIERMV ++++KNSLESYA+ MK+TVEDEK
Sbjct: 509 RLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEK 557
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 404 bits (1038), Expect = e-112
Identities = 212/289 (73%), Positives = 229/289 (79%)
Frame = +3
Query: 6 RAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDK 185
RAKRTLSSS+QA+IEIDSL+EGIDFYT+ITRARFEEL ADLFRST++PVEK+LRDAK+DK
Sbjct: 270 RAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDK 329
Query: 186 HTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAV 365
+HDIVLVGGSTRIPK+QKLL DLF+GKELNKSINPDE ILSGDKSEAV
Sbjct: 330 SQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAV 389
Query: 366 QDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERA 545
QD GIETAGGVMTALIKRN YSDNQPGVLIQVYEGERA
Sbjct: 390 QDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERA 449
Query: 546 MTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKG 725
MTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+NKITITNDKG
Sbjct: 450 MTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKG 509
Query: 726 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEK 872
RLSKDDIERMV RI AKN LESYA+ +K T+EDEK
Sbjct: 510 RLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEK 558
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 404 bits (1037), Expect = e-112
Identities = 212/288 (73%), Positives = 230/288 (79%)
Frame = +3
Query: 6 RAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDK 185
RAKRTLSSS+QA+IEIDSL+EGIDFYTSITRARFEE+ +DLFR TLEPVEKALRDAK+DK
Sbjct: 271 RAKRTLSSSSQASIEIDSLFEGIDFYTSITRARFEEMCSDLFRGTLEPVEKALRDAKMDK 330
Query: 186 HTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAV 365
IHD+VLVGGSTRIPK+QKLLQD FNG+ELNKSINPDE ILSGDKSE V
Sbjct: 331 AQIHDVVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAIQAAILSGDKSENV 390
Query: 366 QDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERA 545
QD GIETAGGVMTALIKRN YSDNQPGV+IQVYEGERA
Sbjct: 391 QDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQPGVMIQVYEGERA 450
Query: 546 MTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKG 725
MTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKG
Sbjct: 451 MTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKG 510
Query: 726 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDE 869
RLSK+DIERMV +IAAKNSLESYA+ MK++VED+
Sbjct: 511 RLSKEDIERMVQDADKYKAEDDAQREKIAAKNSLESYAFNMKSSVEDD 558
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 403 bits (1036), Expect = e-112
Identities = 212/289 (73%), Positives = 230/289 (79%)
Frame = +3
Query: 6 RAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDK 185
RAKRTLSSS+QA+IEIDSL+EGIDFYT+ITRARFEEL ADLFRST++PVEKALRDAK+DK
Sbjct: 268 RAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKALRDAKMDK 327
Query: 186 HTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAV 365
+HDIVLVGGSTRIPK+QKLL D F+GKELNKSINPDE ILSGDKSEAV
Sbjct: 328 AQVHDIVLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAV 387
Query: 366 QDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERA 545
QD GIETAGGVMTALIKRN YSDNQPGVLIQVYEGERA
Sbjct: 388 QDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSETFTTYSDNQPGVLIQVYEGERA 447
Query: 546 MTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKG 725
+TKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+NKITITNDKG
Sbjct: 448 LTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKG 507
Query: 726 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEK 872
RLSKD+IERMV RIAAKN+LESYA+ MK T+EDEK
Sbjct: 508 RLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEK 556
>sp|P11503|HSP70_ONCVO Heat shock 70 kDa protein (HSP70)
Length = 322
Score = 401 bits (1030), Expect = e-111
Identities = 212/289 (73%), Positives = 229/289 (79%)
Frame = +3
Query: 6 RAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDK 185
RAKRTLSSS+QA+IEIDSL+EGIDFYT+ITRARFEEL ADLFRST++PVEKALR AK+DK
Sbjct: 26 RAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKALRVAKMDK 85
Query: 186 HTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAV 365
+HDIVLVGGSTRIPK+QKLL D F+GKELNKSINPDE ILSGDKSEAV
Sbjct: 86 AQVHDIVLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAV 145
Query: 366 QDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERA 545
QD GIETAGGVMTALIKRN YSDNQPGVLIQVYEGERA
Sbjct: 146 QDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSQTFTTYSDNQPGVLIQVYEGERA 205
Query: 546 MTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKG 725
MTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+NKITITNDKG
Sbjct: 206 MTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKG 265
Query: 726 RLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEK 872
RLSKD+IERMV RIAAKN+LESYA+ MK T+EDEK
Sbjct: 266 RLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEK 314
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,763,265
Number of Sequences: 369166
Number of extensions: 1318475
Number of successful extensions: 4439
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3839
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8646143400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)