Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_A18
(435 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P23785|GRN_RAT Granulins precursor [Contains: Acrogranin... 82 5e-16
sp|P28799|GRN_HUMAN Granulins precursor (Proepithelin) (PEP... 81 8e-16
sp|P28798|GRN_MOUSE Granulins precursor (Acrogranin) (Proep... 80 2e-15
sp|P28797|GRN_CAVPO Granulins precursor (Proepithelin) (PEP... 78 7e-15
sp|P81013|GRN1_CYPCA Granulin-1 55 5e-08
sp|P81015|GRN3_CYPCA Granulin-3 54 1e-07
sp|P80930|ENA1_HORSE Antimicrobial peptide eNAP-1 54 1e-07
sp|P81014|GRN2_CYPCA Granulin-2 49 5e-06
sp|P80059|PMD1_LOCMI Pars intercerebralis major peptide D1 ... 49 5e-06
sp|P25777|ORYB_ORYSA Oryzain beta chain precursor 44 2e-04
>sp|P23785|GRN_RAT Granulins precursor [Contains: Acrogranin; Granulin-1 (Granulin G);
Granulin-2 (Granulin F); Granulin-3 (Granulin B)
(Epithelin-2); Granulin-4 (Granulin A) (Epithelin-1);
Granulin-5 (Granulin C); Granulin-6 (Granulin D);
Granulin-7 (Granulin E)]
Length = 588
Score = 82.0 bits (201), Expect = 5e-16
Identities = 42/118 (35%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D LHCCP+ T CDL+ +CI + + + P Y V +K
Sbjct: 238 CSDHLHCCPQDTVCDLIQSKCISK----------DYTTDLMTKLPGYPVNE-------VK 280
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC--VTGGC 349
+ +CPDG TCC + TG +GCCPF+ VCC D CC G+ C TG C
Sbjct: 281 CDLEVSCPDG------YTCCRLNTGAWGCCPFTKAVCCEDHIHCCPAGFQCHTETGTC 332
Score = 72.8 bits (177), Expect = 3e-13
Identities = 37/111 (33%), Positives = 50/111 (45%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D++HCCP G +CDLV+ RCI + P+++ P R+ ++
Sbjct: 157 CEDRVHCCPHGASCDLVHTRCISPTGTH---PLLKKF-------PAQRTNRAVASFSVVC 206
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
K CPD TCC + TG YGCCP +CC D CC C
Sbjct: 207 PDAKTQCPDDS------TCCELPTGKYGCCPMPNAICCSDHLHCCPQDTVC 251
Score = 69.3 bits (168), Expect = 3e-12
Identities = 38/115 (33%), Positives = 50/115 (43%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D+ HCCP G TC++ + C E +V+ S F K
Sbjct: 472 CEDRQHCCPAGYTCNVKARTC---------------------EKDAGSVQPSMDLTFGSK 510
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 346
+G+ C G C Q+CC G + CCP+ GVCC D R CC G+HC G
Sbjct: 511 VGNVE-CGAGHFCHDNQSCCKDSQGGWACCPYVKGVCCRDGRHCCPIGFHCSAKG 564
Score = 63.9 bits (154), Expect = 1e-10
Identities = 32/115 (27%), Positives = 50/115 (43%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D +HCCP G C C ++ P ++ + +A + P + ++ +
Sbjct: 312 CEDHIHCCPAGFQCHTETGTC---ELGVLQVPWMKKV-TASLSLPDPQILKNDVP----- 362
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 346
C D C TCC + +G +GCCP VCC D + CC G+ C+ G
Sbjct: 363 ------CDDFSSCPSNNTCCRLSSGDWGCCPMPEAVCCLDHQHCCPQGFKCMDEG 411
Score = 57.4 bits (137), Expect = 1e-08
Identities = 32/111 (28%), Positives = 39/111 (35%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D HCCP G C K C S+ + ++ P
Sbjct: 92 CDDGQHCCPRGFHCSADGKSCSQISDSLL----------GAVQCP--------------- 126
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
G + CPD TCC+M G +GCCP CC D CC G C
Sbjct: 127 -GSQFECPDSA------TCCIMIDGSWGCCPMPQASCCEDRVHCCPHGASC 170
Score = 53.9 bits (128), Expect = 1e-07
Identities = 33/111 (29%), Positives = 43/111 (38%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D HCCP+G C ++ + D K V ++TL ++
Sbjct: 394 CLDHQHCCPQGFKC--------------MDEGYCQKGDRMVAGLEKMPVRQTTL----LQ 435
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
GD C C QTCC G + CC VCC D + CC GY C
Sbjct: 436 HGDIG-CDQHTSCPVGQTCCPSLKGSWACCQLPHAVCCEDRQHCCPAGYTC 485
Score = 51.6 bits (122), Expect = 7e-07
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +2
Query: 191 KNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 346
+++CPDG +C L +G CCPFS GV C D + CC G+HC G
Sbjct: 64 RDHCPDG------YSCLLTVSGTSSCCPFSEGVSCDDGQHCCPRGFHCSADG 109
>sp|P28799|GRN_HUMAN Granulins precursor (Proepithelin) (PEPI) [Contains: Acrogranin;
Paragranulin; Granulin-1 (Granulin G); Granulin-2
(Granulin F); Granulin-3 (Granulin B); Granulin-4
(Granulin A); Granulin-5 (Granulin C); Granulin-6
(Granulin D); Granulin-7 (Granulin E)]
Length = 593
Score = 81.3 bits (199), Expect = 8e-16
Identities = 39/113 (34%), Positives = 55/113 (48%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D LHCCP+ T CDL+ +C+ + N + + P +TV +K
Sbjct: 240 CSDHLHCCPQDTVCDLIQSKCLSKENATTD---------LLTKLPAHTVGD-------VK 283
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVT 340
+ +CPDG TCC + +G +GCCPF+ VCC D CC G+ C T
Sbjct: 284 CDMEVSCPDG------YTCCRLQSGAWGCCPFTQAVCCEDHIHCCPAGFTCDT 330
Score = 72.0 bits (175), Expect = 5e-13
Identities = 38/121 (31%), Positives = 49/121 (40%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D +HCCP G TCD C P + P +E + ++R
Sbjct: 315 CEDHIHCCPAGFTCDTQKGTC---EQGPHQVPWMEKAPAHLSLPDPQALKRDV------- 364
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGGCA*LG 361
C + C TCC + +G +GCCP VCC D + CC GY CV G G
Sbjct: 365 -----PCDNVSSCPSSDTCCQLTSGEWGCCPIPEAVCCSDHQHCCPQGYTCVAEGQCQRG 419
Query: 362 S 364
S
Sbjct: 420 S 420
Score = 70.9 bits (172), Expect = 1e-12
Identities = 39/112 (34%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D++HCCP G CDLV+ RCI + T AK + P R+ +
Sbjct: 158 CEDRVHCCPHGAFCDLVHTRCITPTG---------THPLAK-KLPAQRTNRAVALSSSVM 207
Query: 182 IGD-KNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
D ++ CPDG TCC + +G YGCCP CC D CC C
Sbjct: 208 CPDARSRCPDGS------TCCELPSGKYGCCPMPNATCCSDHLHCCPQDTVC 253
Score = 67.0 bits (162), Expect = 2e-11
Identities = 35/116 (30%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D+ HCCP G TC++ + C E + + +T
Sbjct: 475 CEDRQHCCPAGYTCNVKARSC---------------------EKEVVSAQPATFLARSPH 513
Query: 182 IGDKN-NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 346
+G K+ C +G C QTCC + CCP+ GVCC D R CC G+ C G
Sbjct: 514 VGVKDVECGEGHFCHDNQTCCRDNRQGWACCPYRQGVCCADRRHCCPAGFRCAARG 569
Score = 59.3 bits (142), Expect = 3e-09
Identities = 31/112 (27%), Positives = 37/112 (33%), Gaps = 1/112 (0%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
CGD HCCP G C + C +S +
Sbjct: 92 CGDGHHCCPRGFHCSADGRSCFQRSGNNSVGAI--------------------------- 124
Query: 182 IGDKNNCPDGG-QCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
CPD +C TCC+M G +GCCP CC D CC G C
Sbjct: 125 -----QCPDSQFECPDFSTCCVMVDGSWGCCPMPQASCCEDRVHCCPHGAFC 171
Score = 56.6 bits (135), Expect = 2e-08
Identities = 35/111 (31%), Positives = 44/111 (39%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D HCCP+G TC + +C S I + + P S R+ I
Sbjct: 397 CSDHQHCCPQGYTC-VAEGQCQRGSE----------IVAGLEKMPARRASLSHPRD--IG 443
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
+CP G QTCC G + CC VCC D + CC GY C
Sbjct: 444 CDQHTSCPVG------QTCCPSLGGSWACCQLPHAVCCEDRQHCCPAGYTC 488
Score = 43.9 bits (102), Expect = 1e-04
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 200 CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 346
C C+ +C +G CCPF V C D CC G+HC G
Sbjct: 61 CQVDAHCSAGHSCIFTVSGTSSCCPFPEAVACGDGHHCCPRGFHCSADG 109
Score = 29.6 bits (65), Expect = 2.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQ 73
C D+ HCCP G C +C+ +
Sbjct: 552 CADRRHCCPAGFRCAARGTKCLRR 575
>sp|P28798|GRN_MOUSE Granulins precursor (Acrogranin) (Proepithelin) (PEPI) (PC
cell-derived growth factor) (PCDGF) [Contains: Granulin
1; Granulin 2; Granulin 3; Granulin 4; Granulin 5;
Granulin 6; Granulin 7]
Length = 589
Score = 79.7 bits (195), Expect = 2e-15
Identities = 40/113 (35%), Positives = 56/113 (49%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D LHCCP+ T CDL+ +C+ ++ T D + P Y V+ +K
Sbjct: 239 CSDHLHCCPQDTVCDLIQSKCLSKNY---------TTDLLT-KLPGYPVKE-------VK 281
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVT 340
+ +CP+G TCC + TG +GCCPF+ VCC D CC G+ C T
Sbjct: 282 CDMEVSCPEG------YTCCRLNTGAWGCCPFAKAVCCEDHIHCCPAGFQCHT 328
Score = 72.8 bits (177), Expect = 3e-13
Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D++HCCP G +CDLV+ RC+ + + + P R+ F +
Sbjct: 157 CEDRVHCCPHGASCDLVHTRCVSPTGT----------HTLLKKFPAQKTNRAVSLPFSVV 206
Query: 182 IGD-KNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
D K CPD TCC + TG YGCCP +CC D CC C
Sbjct: 207 CPDAKTQCPDDS------TCCELPTGKYGCCPMPNAICCSDHLHCCPQDTVC 252
Score = 72.8 bits (177), Expect = 3e-13
Identities = 39/115 (33%), Positives = 54/115 (46%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D+ HCCP G TC++ + C + + I+ PV+ T+ K
Sbjct: 473 CEDRQHCCPAGYTCNVKARTC-EKDVDFIQPPVLLTLGP--------------------K 511
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 346
+G+ C +G C QTCC G + CCP+ GVCC D R CC G+HC G
Sbjct: 512 VGNVE-CGEGHFCHDNQTCCKDSAGVWACCPYLKGVCCRDGRHCCPGGFHCSARG 565
Score = 67.0 bits (162), Expect = 2e-11
Identities = 34/111 (30%), Positives = 42/111 (37%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
CGD HCCP+G C K C S+ P+ ++ P
Sbjct: 92 CGDGYHCCPQGFHCSADGKSCFQMSDNPL----------GAVQCP--------------- 126
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
G + CPD TCC+M G +GCCP CC D CC G C
Sbjct: 127 -GSQFECPDSA------TCCIMVDGSWGCCPMPQASCCEDRVHCCPHGASC 170
Score = 66.2 bits (160), Expect = 3e-11
Identities = 33/115 (28%), Positives = 47/115 (40%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D +HCCP G C H E +++ K+ P + L+
Sbjct: 313 CEDHIHCCPAGFQC--------HTEKGTCEMGILQVPWMKKVIAPLRLPDPQILKS---- 360
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 346
C D +C TCC + +G +GCCP VCC D + CC G+ C+ G
Sbjct: 361 ---DTPCDDFTRCPTNNTCCKLNSGDWGCCPIPEAVCCSDNQHCCPQGFTCLAQG 412
Score = 58.5 bits (140), Expect = 6e-09
Identities = 36/112 (32%), Positives = 45/112 (40%), Gaps = 1/112 (0%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFM-I 178
C D HCCP+G TC L C K +T +E+ R+ +
Sbjct: 395 CSDNQHCCPQGFTC-LAQGYC------------------QKGDTMVAGLEKIPARQTTPL 435
Query: 179 KIGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
+IGD C C QTCC G + CC VCC D + CC GY C
Sbjct: 436 QIGDIG-CDQHTSCPVGQTCCPSLKGSWACCQLPHAVCCEDRQHCCPAGYTC 486
Score = 51.2 bits (121), Expect = 9e-07
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = +2
Query: 197 NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 346
+C G C +C L +G CCPFS GV C D CC G+HC G
Sbjct: 60 SCQTHGHCPAGYSCLLTVSGTSSCCPFSKGVSCGDGYHCCPQGFHCSADG 109
>sp|P28797|GRN_CAVPO Granulins precursor (Proepithelin) (PEPI) [Contains: Acrogranin;
Granulin-1; Granulin-2; Granulin-3; Granulin-4;
Granulin-5; Granulin-6; Granulin-7]
Length = 591
Score = 78.2 bits (191), Expect = 7e-15
Identities = 38/113 (33%), Positives = 54/113 (47%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D LHCCP+ T CDL RC+ Q+ + + P +TV + ++
Sbjct: 240 CSDHLHCCPQDTVCDLRQSRCLSQNKAK----------TLLTKLPSWTV-------WDVE 282
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVT 340
+ +CP+G QTCC + +G +GCCPF VCC D CC + C T
Sbjct: 283 CDQEVSCPEG------QTCCRLQSGKWGCCPFPKAVCCEDHVHCCPERFRCHT 329
Score = 73.6 bits (179), Expect = 2e-13
Identities = 40/115 (34%), Positives = 51/115 (44%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D HCCP G TC++ + C + D A + P ST +
Sbjct: 472 CEDGQHCCPAGYTCNVKARSC------------EKAADGAHLAAP--LAVGSTGGVMDVA 517
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 346
GD++ C D QTCC G + CCPF GVCC D R CC G+HC + G
Sbjct: 518 CGDRHFCHDE------QTCCRDSRGGWACCPFHQGVCCKDQRHCCPAGFHCESQG 566
Score = 72.4 bits (176), Expect = 4e-13
Identities = 41/117 (35%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQ-SNEPI--EWPVVETIDSAKIETPKYT--VERSTLR 166
C D++HCCP G +CDLV+ RC+ + P+ + P T + TP + + + L
Sbjct: 144 CEDRVHCCPHGASCDLVHIRCVTALGSHPLTTKLPAQRTNYTGAEGTPVVSPGLLPAALP 203
Query: 167 EFMIKIGDKNNCPDG-GQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
+I CPD QC TCCL+ +G YGCCP +CC D CC C
Sbjct: 204 TSVI-------CPDSRSQCPDDTTCCLLASGEYGCCPMPNAICCSDHLHCCPQDTVC 253
Score = 55.8 bits (133), Expect = 4e-08
Identities = 32/112 (28%), Positives = 39/112 (34%), Gaps = 1/112 (0%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
CGD HCCP G C CI + P + + + +
Sbjct: 78 CGDGHHCCPYGFHCSTDGGTCIQR-------PDIHLLGAVQ------------------- 111
Query: 182 IGDKNNCPDGG-QCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
CP G +C TCC M G +GCCP CC D CC G C
Sbjct: 112 ------CPGGEFECPDSSTCCHMLDGSWGCCPMPQASCCEDRVHCCPHGASC 157
Score = 46.6 bits (109), Expect = 2e-05
Identities = 21/50 (42%), Positives = 24/50 (48%)
Frame = +2
Query: 197 NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHCVTGG 346
NCP G +C L G CCPFS + C D CC G+HC T G
Sbjct: 52 NCPIG------HSCVLTAAGTAACCPFSQAMACGDGHHCCPYGFHCSTDG 95
Score = 45.8 bits (107), Expect = 4e-05
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +2
Query: 200 CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
C C QTCC G + CC VCC D + CC GY C
Sbjct: 441 CDQHASCPVRQTCCPKLGGGWACCQLPHAVCCEDGQHCCPAGYTC 485
Score = 40.0 bits (92), Expect = 0.002
Identities = 24/98 (24%), Positives = 35/98 (35%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSNEPIEWPVVETIDSAKIETPKYTVERSTLREFMIK 181
C D +HCCPE C C Q + W ++ P
Sbjct: 314 CEDHVHCCPERFRCHTEKDTC-EQGLLQVPWAQKTPAQPSRPSQPSPPGPPGPPSP-PGP 371
Query: 182 IGDKNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCC 295
+ + +C + C CC + +G +GCCP S G C
Sbjct: 372 LRSEISCDEVVSCRPGNICCRLASGEWGCCPSSEGYLC 409
Score = 36.6 bits (83), Expect = 0.024
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCIHQSN 79
C DQ HCCP G C+ RC+H+ +
Sbjct: 549 CKDQRHCCPAGFHCESQGTRCVHKKS 574
>sp|P81013|GRN1_CYPCA Granulin-1
Length = 57
Score = 55.5 bits (132), Expect = 5e-08
Identities = 24/45 (53%), Positives = 26/45 (57%)
Frame = +2
Query: 200 CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
CPDG TCCL G + CCPFS+G CC D CC GYHC
Sbjct: 10 CPDG------TTCCLSPYGVWYCCPFSMGQCCRDGIHCCRHGYHC 48
Score = 28.9 bits (63), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCI 67
C D +HCC G CD + C+
Sbjct: 35 CRDGIHCCRHGYHCDSTSTHCL 56
>sp|P81015|GRN3_CYPCA Granulin-3
Length = 57
Score = 53.9 bits (128), Expect = 1e-07
Identities = 22/45 (48%), Positives = 24/45 (53%)
Frame = +2
Query: 200 CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
C G C TCC G + CCPF +G CC D R CC GYHC
Sbjct: 4 CDAGITCPSGTTCCRSPFGVWYCCPFLMGQCCRDGRHCCRHGYHC 48
>sp|P80930|ENA1_HORSE Antimicrobial peptide eNAP-1
Length = 46
Score = 53.9 bits (128), Expect = 1e-07
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +2
Query: 200 CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGY 328
C +G C QTCC G CCP+S GVCC D R CC G+
Sbjct: 4 CGEGHFCHDXQTCCRASQGGXACCPYSQGVCCADQRHCCPVGF 46
>sp|P81014|GRN2_CYPCA Granulin-2
Length = 57
Score = 48.9 bits (115), Expect = 5e-06
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = +2
Query: 218 CAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
C TCC G + CCPF +G CC D R CC GY C
Sbjct: 10 CPSRTTCCRSPFGVWYCCPFLMGQCCRDGRHCCRHGYRC 48
>sp|P80059|PMD1_LOCMI Pars intercerebralis major peptide D1 (PMP-D1)
Length = 54
Score = 48.9 bits (115), Expect = 5e-06
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = +2
Query: 218 CAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGYHC 334
C G +TCC G GCCP+ GVCC D CC G C
Sbjct: 7 CPGTETCCTTPQGEEGCCPYKEGVCCLDGIHCCPSGTVC 45
Score = 37.4 bits (85), Expect = 0.014
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 2 CGDQLHCCPEGTTCDLVNKRCI 67
C D +HCCP GT CD ++RCI
Sbjct: 32 CLDGIHCCPSGTVCDEDHRRCI 53
>sp|P25777|ORYB_ORYSA Oryzain beta chain precursor
Length = 471
Score = 43.5 bits (101), Expect = 2e-04
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +2
Query: 188 DKNNCPDGGQCA---GLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPGY 328
D +CP G C G + CL++ GCCP CC D +CC P Y
Sbjct: 387 DNFSCPAGSTCCCAFGFRNLCLVW----GCCPVEGATCCKDHASCCPPDY 432
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,404,058
Number of Sequences: 369166
Number of extensions: 1150024
Number of successful extensions: 3809
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3751
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2194785120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)