Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_A17-1
(478 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3... 97 1e-20
sp|P34269|TYR1_CAEEL Putative tyrosinase-like protein tyr-1... 61 2e-09
sp|P55115|NAS15_CAEEL Zinc metalloproteinase nas-15 precurs... 53 4e-07
sp|Q90Y54|JAG1B_BRARE Jagged-1b precursor (Jagged1b) (Jagged3) 52 9e-07
sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor 50 3e-06
sp|Q20191|NAS13_CAEEL Zinc metalloproteinase nas-13 precurs... 49 5e-06
sp|Q9QXX0|JAG1_MOUSE Jagged-1 precursor (Jagged1) 49 6e-06
sp|P78504|JAG1_HUMAN Jagged-1 precursor (Jagged1) (hJ1) (CD... 49 6e-06
sp|Q63722|JAG1_RAT Jagged-1 precursor (Jagged1) 49 6e-06
sp|Q8UWJ4|DLLD_BRARE Delta-like protein D precursor (DeltaD... 44 3e-04
>sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3 precursor
Length = 683
Score = 97.4 bits (241), Expect = 1e-20
Identities = 56/180 (31%), Positives = 80/180 (44%), Gaps = 35/180 (19%)
Frame = -2
Query: 477 ESDPSFMLQNCKESCGVCDGSSK-NRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCN 301
+ +P +M CK SC C + N C D + +CA W+ S EC NP WM NC+ SC
Sbjct: 479 QKNPVYMNVWCKASCRQCTPNYNINEECSDRHTNCAMWSRSGECNKNPLWMSENCRSSCQ 538
Query: 300 HCRDAR---------LESISNPN-------------------CKDLQIHCLYWANAGECQ 205
C +R +SISNP C + C WA G+C+
Sbjct: 539 KCGRSRAATCGGGGGADSISNPTTMPPATNNGQQNTPCDSPMCYNEDQCCPIWAQRGQCR 598
Query: 204 LNPGWAKQNCPFSCQHC------GGCRDLIQNCQNFANQGYCKTNEVYMNQSCKKTCGFC 43
NPG+ C SC C G C D +C +A +G C N+ +M ++C+++C C
Sbjct: 599 SNPGYMTCQCKVSCGVCRPNYVYGPCADYHYDCAAWARRGECLKNK-WMPENCRRSCNTC 657
Score = 92.0 bits (227), Expect = 6e-19
Identities = 50/158 (31%), Positives = 64/158 (40%), Gaps = 38/158 (24%)
Frame = -2
Query: 399 CVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISNPNCKDLQIHCLYWAN 220
C + N+ C W+A EC+ NP +M CK SC C N C D +C W+
Sbjct: 462 CFNENECCGPWSAKGECQKNPVYMNVWCKASCRQCTP---NYNINEECSDRHTNCAMWSR 518
Query: 219 AGECQLNPGWAKQNCPFSCQHC----------GGCRDLIQN------------------- 127
+GEC NP W +NC SCQ C GG D I N
Sbjct: 519 SGECNKNPLWMSENCRSSCQKCGRSRAATCGGGGGADSISNPTTMPPATNNGQQNTPCDS 578
Query: 126 ---------CQNFANQGYCKTNEVYMNQSCKKTCGFCR 40
C +A +G C++N YM CK +CG CR
Sbjct: 579 PMCYNEDQCCPIWAQRGQCRSNPGYMTCQCKVSCGVCR 616
Score = 67.8 bits (164), Expect = 1e-11
Identities = 43/148 (29%), Positives = 56/148 (37%), Gaps = 32/148 (21%)
Frame = -2
Query: 471 DPSFMLQNCKESCGVCDGS---------------------------SKNRPC-----VDA 388
+P +M +NC+ SC C S +N PC +
Sbjct: 525 NPLWMSENCRSSCQKCGRSRAATCGGGGGADSISNPTTMPPATNNGQQNTPCDSPMCYNE 584
Query: 387 NQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISNPNCKDLQIHCLYWANAGEC 208
+Q C WA +C +NP +M CK SC CR + P C D C WA GEC
Sbjct: 585 DQCCPIWAQRGQCRSNPGYMTCQCKVSCGVCRP---NYVYGP-CADYHYDCAAWARRGEC 640
Query: 207 QLNPGWAKQNCPFSCQHCGGCRDLIQNC 124
N W +NC SC C + L C
Sbjct: 641 LKNK-WMPENCRRSCNTCVNQQQLAARC 667
Score = 52.0 bits (123), Expect = 7e-07
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 7/144 (4%)
Frame = -2
Query: 453 QNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLES 274
+N +++C GS ++ CV +Q+ + P+ + + C RL+
Sbjct: 405 KNGEDAC--YQGSCQSGKCVAGSQN-----VTPPPTIQPTKPVVTVEVFSETCLKIRLKF 457
Query: 273 ISNPNCKDLQIHCLYWANAGECQLNPGWAKQNCPFSCQHC-------GGCRDLIQNCQNF 115
+C + C W+ GECQ NP + C SC+ C C D NC +
Sbjct: 458 FQT-SCFNENECCGPWSAKGECQKNPVYMNVWCKASCRQCTPNYNINEECSDRHTNCAMW 516
Query: 114 ANQGYCKTNEVYMNQSCKKTCGFC 43
+ G C N ++M+++C+ +C C
Sbjct: 517 SRSGECNKNPLWMSENCRSSCQKC 540
>sp|P34269|TYR1_CAEEL Putative tyrosinase-like protein tyr-1 precursor
Length = 601
Score = 60.8 bits (146), Expect = 2e-09
Identities = 30/98 (30%), Positives = 43/98 (43%)
Frame = -2
Query: 399 CVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISNPNCKDLQIHCLYWAN 220
C + + C W+ +EC TN +M C+KSC C+ + +N C D I C YW
Sbjct: 480 CYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQS----NDNNRGCHDRHISCAYWRG 535
Query: 219 AGECQLNPGWAKQNCPFSCQHCGGCRDLIQNCQNFANQ 106
C W +NC +C C + Q C + A Q
Sbjct: 536 QNFCTRRRQWMAENCQATCGWCN--MNEAQLCASVARQ 571
Score = 55.5 bits (132), Expect = 6e-08
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = -2
Query: 462 FMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHC 295
+M + C++SCG+C + NR C D + CA W + C WM NC+ +C C
Sbjct: 502 YMNRYCRKSCGLCQSNDNNRGCHDRHISCAYWRGQNFCTRRRQWMAENCQATCGWC 557
Score = 50.4 bits (119), Expect = 2e-06
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = -2
Query: 261 NCKDLQIHCLYWANAGECQLNPGWAKQNCPFSCQHCG------GCRDLIQNCQNFANQGY 100
NC + C W+ EC+ N + + C SC C GC D +C + Q +
Sbjct: 479 NCYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQSNDNNRGCHDRHISCAYWRGQNF 538
Query: 99 CKTNEVYMNQSCKKTCGFC 43
C +M ++C+ TCG+C
Sbjct: 539 CTRRRQWMAENCQATCGWC 557
Score = 42.4 bits (98), Expect = 6e-04
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -2
Query: 126 CQNFANQGYCKTNEVYMNQSCKKTCGFCR 40
C ++ Q C+TN VYMN+ C+K+CG C+
Sbjct: 487 CNQWSRQNECRTNTVYMNRYCRKSCGLCQ 515
>sp|P55115|NAS15_CAEEL Zinc metalloproteinase nas-15 precursor (Nematode astacin 15)
Length = 571
Score = 52.8 bits (125), Expect = 4e-07
Identities = 31/118 (26%), Positives = 41/118 (34%), Gaps = 46/118 (38%)
Frame = -2
Query: 258 CKDLQIHCLYWANAGECQLNPGWAKQNCPFSCQHC------------------------- 154
C++L+ C A G C NPGW + NCP SC C
Sbjct: 354 CRNLRGDCDDLAKQGWCIRNPGWMRANCPISCGMCIPTKETQKPYVQTTTQAATTTARPQ 413
Query: 153 ---------------------GGCRDLIQNCQNFANQGYCKTNEVYMNQSCKKTCGFC 43
C DL +C +Q YCK ++ +M C K+CGFC
Sbjct: 414 KPVTQPIQPLPPVPPLPPTTPEDCEDLRVDCLVLVSQRYCKISQNFMKSYCAKSCGFC 471
Score = 40.4 bits (93), Expect = 0.002
Identities = 27/122 (22%), Positives = 39/122 (31%), Gaps = 36/122 (29%)
Frame = -2
Query: 411 KNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDAR----------------- 283
K C + DC A C NP WM NC SC C +
Sbjct: 350 KPSECRNLRGDCDDLAKQGWCIRNPGWMRANCPISCGMCIPTKETQKPYVQTTTQAATTT 409
Query: 282 -------------------LESISNPNCKDLQIHCLYWANAGECQLNPGWAKQNCPFSCQ 160
L + +C+DL++ CL + C+++ + K C SC
Sbjct: 410 ARPQKPVTQPIQPLPPVPPLPPTTPEDCEDLRVDCLVLVSQRYCKISQNFMKSYCAKSCG 469
Query: 159 HC 154
C
Sbjct: 470 FC 471
Score = 35.4 bits (80), Expect = 0.068
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 10/114 (8%)
Frame = -2
Query: 465 SFMLQNCKESCGVC-----DGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCN 301
+FM C +SCG C NRP V + + +P+ + K+
Sbjct: 458 NFMKSYCAKSCGFCFKPPPTEIPDNRPTVVTTRPLVTLPPAVIRSRSPAPPVSTTTKAAP 517
Query: 300 HCRDARLESISNP----NCKDLQIHCLYWANAGECQ-LNPGWAKQNCPFSCQHC 154
S C D + C +W +AG C+ + + K+NCP SC C
Sbjct: 518 TTSTTSAAPYSPTPLPSECSDRKHFCSHWKSAGFCEGIFMNYMKKNCPASCGLC 571
Score = 28.5 bits (62), Expect = 8.3
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 147 CRDLIQNCQNFANQGYCKTNEV-YMNQSCKKTCGFC 43
C D C ++ + G+C+ + YM ++C +CG C
Sbjct: 536 CSDRKHFCSHWKSAGFCEGIFMNYMKKNCPASCGLC 571
>sp|Q90Y54|JAG1B_BRARE Jagged-1b precursor (Jagged1b) (Jagged3)
Length = 1213
Score = 51.6 bits (122), Expect = 9e-07
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 1/135 (0%)
Frame = -2
Query: 441 ESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISNP 262
++C + +++PCV+A + C ++ CE P W NC + N C+ + ++
Sbjct: 404 KTCQIDANECEDKPCVNA-KSCHNLIGAYFCECLPGWSGQNCDININDCKG---QCLNGG 459
Query: 261 NCKDLQIHCLYWANAGECQLNPGWAKQNCPFSCQHCGGCRDLI-QNCQNFANQGYCKTNE 85
CKDL N C PG+ + C C L CQ+ N C
Sbjct: 460 TCKDL-------VNGYRCLCPPGYTGEQCEKDVDECASSPCLNGGRCQDEVNGFQCLCPA 512
Query: 84 VYMNQSCKKTCGFCR 40
+ Q C+ +C+
Sbjct: 513 GFSGQLCQLDIDYCK 527
Score = 43.9 bits (102), Expect = 2e-04
Identities = 27/112 (24%), Positives = 40/112 (35%)
Frame = -2
Query: 378 CAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISNPNCKDLQIHCLYWANAGECQLN 199
C +C P W C+ N C D ++ +C +L A C+
Sbjct: 386 CQDLVNGFKCACPPHWTGKTCQIDANECEDK--PCVNAKSCHNL-------IGAYFCECL 436
Query: 198 PGWAKQNCPFSCQHCGGCRDLIQNCQNFANQGYCKTNEVYMNQSCKKTCGFC 43
PGW+ QNC + C G C++ N C Y + C+K C
Sbjct: 437 PGWSGQNCDININDCKGQCLNGGTCKDLVNGYRCLCPPGYTGEQCEKDVDEC 488
Score = 37.4 bits (85), Expect = 0.018
Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Frame = -2
Query: 453 QNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLES 274
Q C + C ++PC++ ++C + NC+++ + C
Sbjct: 288 QLCDKDLNYC---GTHQPCLNGGTCSNTGPDKYQCSCEDGYSGVNCERAEHAC------- 337
Query: 273 ISNP-----NCKDL----QIHCLYWANAGECQLNPGWAKQNC-PFSCQHCGGCRDLI--- 133
+SNP CK+ + HC + C++N +C P C+H G C+DL+
Sbjct: 338 LSNPCANGGTCKETSQGYECHCAIGWSGTSCEINV----DDCTPNQCKHGGTCQDLVNGF 393
Query: 132 ----------QNCQNFANQGYCKTNEVYMNQSCKKTCG--FC 43
+ CQ AN+ C+ +SC G FC
Sbjct: 394 KCACPPHWTGKTCQIDANE--CEDKPCVNAKSCHNLIGAYFC 433
Score = 31.6 bits (70), Expect = 0.99
Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 1/104 (0%)
Frame = -2
Query: 351 CETNPSWMLYNCKKSCNHCRDARLESISNPNCKDLQIHCLYWANAGECQLNPGWAKQNCP 172
CE + C ++ N C SNP C++ C+ N +C GW +C
Sbjct: 612 CECQEGFRGTYCHENINDCE-------SNP-CRNGGT-CIDKVNVYQCICADGWEGVHCE 662
Query: 171 FSCQHCGGCRDLIQN-CQNFANQGYCKTNEVYMNQSCKKTCGFC 43
+ C L + CQ+ N YC+ + ++C C
Sbjct: 663 INIDDCSLNPCLNKGACQDLVNDFYCECRNGWKGKTCHSRDSQC 706
>sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor
Length = 180
Score = 49.7 bits (117), Expect = 3e-06
Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 12/151 (7%)
Frame = -2
Query: 456 LQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSW--MLYNCKKSCNHC--RD 289
L+ C +CG C+ + N C D ++ C + + + C +CN C
Sbjct: 31 LEKCPATCGKCNRKNANL-CSDKSKPDICVNLKTLCNSVEFYDKLSEQCPSTCNRCPHNG 89
Query: 288 ARLESISNPN-------CKDLQIHCLYWANAGECQLNPGWAKQNCPFSCQHCGGCRDLIQ 130
E+ + N C DL C Y N + + CP +C C C D +
Sbjct: 90 TNPENKTGGNGGTGTQECTDLANDCSYNQNRCSVKEYSSLMHRLCPKTCNACNICEDANK 149
Query: 129 NCQNFANQGYC-KTNEVYMNQSCKKTCGFCR 40
C + +G+C K + + +SC K+C C+
Sbjct: 150 MCPIWVPRGFCSKFDHDKVQKSCAKSCNICK 180
>sp|Q20191|NAS13_CAEEL Zinc metalloproteinase nas-13 precursor (Nematode astacin 13)
Length = 527
Score = 49.3 bits (116), Expect = 5e-06
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Frame = -2
Query: 258 CKDLQIHCLYWANAGECQ--LNPGWAKQNCPFSCQHCGG-------CRDLIQNCQNFANQ 106
C+D + C + A AG C+ + + +NC SC C C D C+ +AN
Sbjct: 445 CEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKCIAEEKRKEVCEDARTWCERWANS 504
Query: 105 GYCKTN--EVYMNQSCKKTCGFC 43
G C + YM Q C K+C FC
Sbjct: 505 GMCNQTVFKDYMRQKCAKSCNFC 527
Score = 47.8 bits (112), Expect = 1e-05
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = -2
Query: 399 CVDANQDCAGWAASHECETNPS--WMLYNCKKSCNHCRDARLESISNPNCKDLQIHCLYW 226
C D +DC A + CE+ S +M NC SC C E C+D + C W
Sbjct: 445 CEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKCI---AEEKRKEVCEDARTWCERW 501
Query: 225 ANAGECQ--LNPGWAKQNCPFSCQHC 154
AN+G C + + +Q C SC C
Sbjct: 502 ANSGMCNQTVFKDYMRQKCAKSCNFC 527
Score = 47.8 bits (112), Expect = 1e-05
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -2
Query: 462 FMLQNCKESCGVCDGSSKNRP-CVDANQDCAGWAASHECETN--PSWMLYNCKKSCNHC 295
FM +NC SCG C K + C DA C WA S C +M C KSCN C
Sbjct: 469 FMTENCANSCGKCIAEEKRKEVCEDARTWCERWANSGMCNQTVFKDYMRQKCAKSCNFC 527
Score = 31.2 bits (69), Expect = 1.3
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -2
Query: 153 GGCRDLIQNCQNFANQGYCKT--NEVYMNQSCKKTCGFC 43
G C D ++C+ A G+C++ + +M ++C +CG C
Sbjct: 443 GKCEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKC 481
>sp|Q9QXX0|JAG1_MOUSE Jagged-1 precursor (Jagged1)
Length = 1218
Score = 48.9 bits (115), Expect = 6e-06
Identities = 42/173 (24%), Positives = 66/173 (38%), Gaps = 30/173 (17%)
Frame = -2
Query: 468 PSFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHC-- 295
P + + C+ C+ +PCV+A + C AS+ C+ P WM NC + N C
Sbjct: 402 PQWTGKTCQLDANECEA----KPCVNA-RSCKNLIASYYCDCLPGWMGQNCDININDCLG 456
Query: 294 ---RDARLESISN------------PNC-KDLQI----------HCLYWANAGECQLNPG 193
DA + N +C +D+ HC N +C G
Sbjct: 457 QCQNDASCRDLVNGYRCICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLCPTG 516
Query: 192 WAKQNCPFSCQHC--GGCRDLIQNCQNFANQGYCKTNEVYMNQSCKKTCGFCR 40
++ C +C C++ Q C N A+ +CK E Y ++C CR
Sbjct: 517 FSGNLCQLDIDYCEPNPCQNGAQ-CYNRASDYFCKCPEDYEGKNCSHLKDHCR 568
Score = 44.3 bits (103), Expect = 1e-04
Identities = 38/147 (25%), Positives = 51/147 (34%), Gaps = 22/147 (14%)
Frame = -2
Query: 474 SDPSFMLQNCKESCG----VCDGSSKNRPCVDANQDCAGWAASH-----------ECETN 340
SDP +CKE+ C C DC+ SH +C
Sbjct: 342 SDPCHNRGSCKETSSGFECECSPGWTGPTCSTNIDDCSPNNCSHGGTCQDLVNGFKCVCP 401
Query: 339 PSWMLYNCKKSCNHCRDARLESISNPNCKDLQIHCLYWANAGECQLNPGWAKQNCPFS-- 166
P W C+ N C ++ +CK+L I Y C PGW QNC +
Sbjct: 402 PQWTGKTCQLDANECEAK--PCVNARSCKNL-IASYY------CDCLPGWMGQNCDININ 452
Query: 165 -----CQHCGGCRDLIQNCQNFANQGY 100
CQ+ CRDL+ + GY
Sbjct: 453 DCLGQCQNDASCRDLVNGYRCICPPGY 479
Score = 32.0 bits (71), Expect = 0.75
Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 14/142 (9%)
Frame = -2
Query: 447 CKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESIS 268
C E+ C+ + PC + C S++C + W +C+ + N C
Sbjct: 626 CHENINDCESN----PCKNGGT-CIDGVNSYKCICSDGWEGAHCENNINDCS-------Q 673
Query: 267 NP-----NCKDLQIHCLYWANAGECQLNPGWAKQNC--------PFSCQHCGGCRDLIQN 127
NP C+DL N C GW + C +C + G C D +
Sbjct: 674 NPCHYGGTCRDL-------VNDFYCDCKNGWKGKTCHSRDSQCDEATCNNGGTCYDEVDT 726
Query: 126 CQNFANQGYCKTN-EVYMNQSC 64
+ G+ T + N SC
Sbjct: 727 FKCMCPGGWEGTTCNIARNSSC 748
>sp|P78504|JAG1_HUMAN Jagged-1 precursor (Jagged1) (hJ1) (CD339 antigen)
Length = 1218
Score = 48.9 bits (115), Expect = 6e-06
Identities = 42/173 (24%), Positives = 66/173 (38%), Gaps = 30/173 (17%)
Frame = -2
Query: 468 PSFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHC-- 295
P + + C+ C+ +PCV+A + C AS+ C+ P WM NC + N C
Sbjct: 402 PQWTGKTCQLDANECEA----KPCVNA-KSCKNLIASYYCDCLPGWMGQNCDININDCLG 456
Query: 294 ---RDARLESISN------------PNC-KDLQI----------HCLYWANAGECQLNPG 193
DA + N +C +D+ HC N +C G
Sbjct: 457 QCQNDASCRDLVNGYRCICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLCPTG 516
Query: 192 WAKQNCPFSCQHC--GGCRDLIQNCQNFANQGYCKTNEVYMNQSCKKTCGFCR 40
++ C +C C++ Q C N A+ +CK E Y ++C CR
Sbjct: 517 FSGNLCQLDIDYCEPNPCQNGAQ-CYNRASDYFCKCPEDYEGKNCSHLKDHCR 568
Score = 44.3 bits (103), Expect = 1e-04
Identities = 40/147 (27%), Positives = 52/147 (35%), Gaps = 22/147 (14%)
Frame = -2
Query: 474 SDPSFMLQNCKE-SCGV---CDGSSKNRPCVDANQDCAGWAASH-----------ECETN 340
SDP +CKE S G C C DC+ SH +C
Sbjct: 342 SDPCHNRGSCKETSLGFECECSPGWTGPTCSTNIDDCSPNNCSHGGTCQDLVNGFKCVCP 401
Query: 339 PSWMLYNCKKSCNHCRDARLESISNPNCKDLQIHCLYWANAGECQLNPGWAKQNCPFS-- 166
P W C+ N C ++ +CK+L I Y C PGW QNC +
Sbjct: 402 PQWTGKTCQLDANECEAK--PCVNAKSCKNL-IASYY------CDCLPGWMGQNCDININ 452
Query: 165 -----CQHCGGCRDLIQNCQNFANQGY 100
CQ+ CRDL+ + GY
Sbjct: 453 DCLGQCQNDASCRDLVNGYRCICPPGY 479
>sp|Q63722|JAG1_RAT Jagged-1 precursor (Jagged1)
Length = 1219
Score = 48.9 bits (115), Expect = 6e-06
Identities = 42/173 (24%), Positives = 66/173 (38%), Gaps = 30/173 (17%)
Frame = -2
Query: 468 PSFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHC-- 295
P + + C+ C+ +PCV+A + C AS+ C+ P WM NC + N C
Sbjct: 402 PQWTGKTCQLDANECEA----KPCVNA-RSCKNLIASYYCDCLPGWMGQNCDININDCLG 456
Query: 294 ---RDARLESISN------------PNC-KDLQI----------HCLYWANAGECQLNPG 193
DA + N +C +D+ HC N +C G
Sbjct: 457 QCQNDASCRDLVNGYRCICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLCPTG 516
Query: 192 WAKQNCPFSCQHC--GGCRDLIQNCQNFANQGYCKTNEVYMNQSCKKTCGFCR 40
++ C +C C++ Q C N A+ +CK E Y ++C CR
Sbjct: 517 FSGNLCQLDIDYCEPNPCQNGAQ-CYNRASDYFCKCPEDYEGKNCSHLKDHCR 568
Score = 44.3 bits (103), Expect = 1e-04
Identities = 38/147 (25%), Positives = 51/147 (34%), Gaps = 22/147 (14%)
Frame = -2
Query: 474 SDPSFMLQNCKESCG----VCDGSSKNRPCVDANQDCAGWAASH-----------ECETN 340
SDP +CKE+ C C DC+ SH +C
Sbjct: 342 SDPCHNRGSCKETSSGFECECSPGWTGPTCSTNIDDCSPNNCSHGGTCQDLVNGFKCVCP 401
Query: 339 PSWMLYNCKKSCNHCRDARLESISNPNCKDLQIHCLYWANAGECQLNPGWAKQNCPFS-- 166
P W C+ N C ++ +CK+L I Y C PGW QNC +
Sbjct: 402 PQWTGKTCQLDANECEAK--PCVNARSCKNL-IASYY------CDCLPGWMGQNCDININ 452
Query: 165 -----CQHCGGCRDLIQNCQNFANQGY 100
CQ+ CRDL+ + GY
Sbjct: 453 DCLGQCQNDASCRDLVNGYRCICPPGY 479
Score = 35.0 bits (79), Expect = 0.089
Identities = 32/142 (22%), Positives = 50/142 (35%), Gaps = 14/142 (9%)
Frame = -2
Query: 447 CKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESIS 268
C E+ C+G+ PC + C S++C + W +C+ + N C
Sbjct: 626 CHENINDCEGN----PCTNGGT-CIDGVNSYKCICSDGWEGAHCENNINDCS-------Q 673
Query: 267 NP-----NCKDLQIHCLYWANAGECQLNPGWAKQNC--------PFSCQHCGGCRDLIQN 127
NP C+DL N C GW + C +C + G C D +
Sbjct: 674 NPCHYGGTCRDL-------VNDFYCDCKNGWKGKTCHSRDSQCDEATCNNGGTCYDEVDT 726
Query: 126 CQNFANQGYCKTN-EVYMNQSC 64
+ G+ T + N SC
Sbjct: 727 FKCMCPGGWEGTTCNIARNSSC 748
>sp|Q8UWJ4|DLLD_BRARE Delta-like protein D precursor (DeltaD protein) (After eight
protein)
Length = 717
Score = 43.5 bits (101), Expect = 3e-04
Identities = 35/136 (25%), Positives = 53/136 (38%), Gaps = 9/136 (6%)
Frame = -2
Query: 468 PSFMLQNCKESCGVC-DGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCR 292
P F +NC+ S C DG PC + + C+ + +NC+K +HC
Sbjct: 354 PGFYGRNCELSAMTCADG-----PCFNGGHCADNPEGGYFCQCPMGYAGFNCEKKIDHCS 408
Query: 291 DARLESISNPNCKDLQIHCLYWANAGECQLNPGWAKQNC--------PFSCQHCGGCRDL 136
SNP D Q CL ++ CQ G+ +C + CQ+ G C+D
Sbjct: 409 -------SNPCSNDAQ--CLDLVDSYLCQCPEGFTGTHCEDNIDECATYPCQNGGTCQDG 459
Query: 135 IQNCQNFANQGYCKTN 88
+ + GY N
Sbjct: 460 LSDYTCTCPPGYTGKN 475
Score = 37.0 bits (84), Expect = 0.023
Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 2/137 (1%)
Frame = -2
Query: 447 CKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESIS 268
C + C + ++PC + S+ C P + +C+ N C + +
Sbjct: 283 CNQDLNYC---THHKPCQNGATCTNTGQGSYTCSCRPGFTGDSCEIEVNECSGSPCRN-- 337
Query: 267 NPNCKDLQIHCLYWANAGECQLNPGWAKQNCPFSCQHC--GGCRDLIQNCQNFANQGYCK 94
+C DL+ N C PG+ +NC S C G C + N +C+
Sbjct: 338 GGSCTDLE-------NTYSCTCPPGFYGRNCELSAMTCADGPCFNGGHCADNPEGGYFCQ 390
Query: 93 TNEVYMNQSCKKTCGFC 43
Y +C+K C
Sbjct: 391 CPMGYAGFNCEKKIDHC 407
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,798,087
Number of Sequences: 369166
Number of extensions: 1171714
Number of successful extensions: 3743
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3589
length of database: 68,354,980
effective HSP length: 101
effective length of database: 49,696,745
effective search space used: 2832714465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)