Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_017_N01
(896 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P20163|HSP7D_CAEEL Heat shock 70 kDa protein D precursor 346 4e-95
sp|P20029|GRP78_MOUSE 78 kDa glucose-regulated protein prec... 345 8e-95
sp|P07823|GRP78_MESAU 78 kDa glucose-regulated protein prec... 345 8e-95
sp|Q90593|GRP78_CHICK 78 kDa glucose-regulated protein prec... 345 8e-95
sp|P06761|GRP78_RAT 78 kDa glucose-regulated protein precur... 345 8e-95
sp|P11021|GRP78_HUMAN 78 kDa glucose-regulated protein prec... 345 1e-94
sp|P19208|HSP7C_CAEBR Heat shock 70 kDa protein C precursor 344 2e-94
sp|P27420|HSP7C_CAEEL Heat shock 70 kDa protein C precursor 343 4e-94
sp|Q91883|GRP78_XENLA 78 kDa glucose-regulated protein prec... 342 1e-93
sp|Q16956|GRP78_APLCA 78 kDa glucose-regulated protein prec... 340 2e-93
>sp|P20163|HSP7D_CAEEL Heat shock 70 kDa protein D precursor
Length = 657
Score = 346 bits (888), Expect = 4e-95
Identities = 185/297 (62%), Positives = 205/297 (69%)
Frame = +1
Query: 4 EHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGEDFDQRVIDYFSXXXXXXXXX 183
E ILVFDLGGGTFDVSLL ID GVFEV+ATNGDTHLGGEDFDQRV++YF
Sbjct: 219 ERNILVFDLGGGTFDVSLLTIDSGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSGK 278
Query: 184 XXXXXXRAIQKLRREVEKAKRALSSVLTTRIEIESLIDGEDFSETLTRAKFEELNADLFK 363
RA+QKLRREVEKAKRALS+ T+IEIESL DGEDFSETLTRAKFEELN DLF+
Sbjct: 279 DLRKDNRAVQKLRREVEKAKRALSTQHQTKIEIESLFDGEDFSETLTRAKFEELNMDLFR 338
Query: 364 STLIPVEKVLQDGGLKKTDIAEIVLVGGSTRIPKVQELVKGFFNGKEPNKGINPDEXXXX 543
+TL PV+KVL+D +KKTD+ EIVLVGGSTRIPKVQ+L+K +FNGKEP++GINPDE
Sbjct: 339 ATLKPVQKVLEDADMKKTDVHEIVLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDEAVAY 398
Query: 544 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGMELEGGVMAKLINRNTPIPTIKKXXXXXXXX 723
G+E GGVM KLI RNT IPT K
Sbjct: 399 GAAVQAGVIGGVENTGDVVLLDVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAAD 458
Query: 724 XXXXXXXXXYEGERQLVKDNHFLGQFDLTGIPPAPRGVPQIEVTFEIDANGILKVSA 894
YEGER +V DNH LG FD+TGIPPAPRGVPQIEVTFEID NGIL VSA
Sbjct: 459 SQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSA 515
>sp|P20029|GRP78_MOUSE 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 655
Score = 345 bits (886), Expect = 8e-95
Identities = 186/297 (62%), Positives = 204/297 (68%)
Frame = +1
Query: 4 EHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGEDFDQRVIDYFSXXXXXXXXX 183
E ILVFDLGGGTFDVSLL ID GVFEVVATNGDTHLGGEDFDQRV+++F
Sbjct: 218 EKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGK 277
Query: 184 XXXXXXRAIQKLRREVEKAKRALSSVLTTRIEIESLIDGEDFSETLTRAKFEELNADLFK 363
RA+QKLRREVEKAKRALSS RIEIES +GEDFSETLTRAKFEELN DLF+
Sbjct: 278 DVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFR 337
Query: 364 STLIPVEKVLQDGGLKKTDIAEIVLVGGSTRIPKVQELVKGFFNGKEPNKGINPDEXXXX 543
ST+ PV+KVL+D LKK+DI EIVLVGGSTRIPK+Q+LVK FFNGKEP++GINPDE
Sbjct: 338 STMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAY 397
Query: 544 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGMELEGGVMAKLINRNTPIPTIKKXXXXXXXX 723
G+E GGVM KLI RNT +PT K
Sbjct: 398 GAAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASD 457
Query: 724 XXXXXXXXXYEGERQLVKDNHFLGQFDLTGIPPAPRGVPQIEVTFEIDANGILKVSA 894
YEGER L KDNH LG FDLTGIPPAPRGVPQIEVTFEID NGIL+V+A
Sbjct: 458 NQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTA 514
>sp|P07823|GRP78_MESAU 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 654
Score = 345 bits (886), Expect = 8e-95
Identities = 186/297 (62%), Positives = 204/297 (68%)
Frame = +1
Query: 4 EHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGEDFDQRVIDYFSXXXXXXXXX 183
E ILVFDLGGGTFDVSLL ID GVFEVVATNGDTHLGGEDFDQRV+++F
Sbjct: 217 EKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGK 276
Query: 184 XXXXXXRAIQKLRREVEKAKRALSSVLTTRIEIESLIDGEDFSETLTRAKFEELNADLFK 363
RA+QKLRREVEKAKRALSS RIEIES +GEDFSETLTRAKFEELN DLF+
Sbjct: 277 DVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFR 336
Query: 364 STLIPVEKVLQDGGLKKTDIAEIVLVGGSTRIPKVQELVKGFFNGKEPNKGINPDEXXXX 543
ST+ PV+KVL+D LKK+DI EIVLVGGSTRIPK+Q+LVK FFNGKEP++GINPDE
Sbjct: 337 STMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAY 396
Query: 544 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGMELEGGVMAKLINRNTPIPTIKKXXXXXXXX 723
G+E GGVM KLI RNT +PT K
Sbjct: 397 GAAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASD 456
Query: 724 XXXXXXXXXYEGERQLVKDNHFLGQFDLTGIPPAPRGVPQIEVTFEIDANGILKVSA 894
YEGER L KDNH LG FDLTGIPPAPRGVPQIEVTFEID NGIL+V+A
Sbjct: 457 NQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTA 513
>sp|Q90593|GRP78_CHICK 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 652
Score = 345 bits (886), Expect = 8e-95
Identities = 186/297 (62%), Positives = 204/297 (68%)
Frame = +1
Query: 4 EHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGEDFDQRVIDYFSXXXXXXXXX 183
E ILVFDLGGGTFDVSLL ID GVFEVVATNGDTHLGGEDFDQRV+++F
Sbjct: 215 EKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGK 274
Query: 184 XXXXXXRAIQKLRREVEKAKRALSSVLTTRIEIESLIDGEDFSETLTRAKFEELNADLFK 363
RA+QKLRREVEKAKRALSS RIEIES +GEDFSETLTRAKFEELN DLF+
Sbjct: 275 DVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFR 334
Query: 364 STLIPVEKVLQDGGLKKTDIAEIVLVGGSTRIPKVQELVKGFFNGKEPNKGINPDEXXXX 543
ST+ PV+KVL+D LKK+DI EIVLVGGSTRIPK+Q+LVK FFNGKEP++GINPDE
Sbjct: 335 STMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAY 394
Query: 544 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGMELEGGVMAKLINRNTPIPTIKKXXXXXXXX 723
G+E GGVM KLI RNT +PT K
Sbjct: 395 GAAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASD 454
Query: 724 XXXXXXXXXYEGERQLVKDNHFLGQFDLTGIPPAPRGVPQIEVTFEIDANGILKVSA 894
YEGER L KDNH LG FDLTGIPPAPRGVPQIEVTFEID NGIL+V+A
Sbjct: 455 NQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTA 511
>sp|P06761|GRP78_RAT 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
(Steroidogenesis-activator polypeptide)
Length = 654
Score = 345 bits (886), Expect = 8e-95
Identities = 186/297 (62%), Positives = 204/297 (68%)
Frame = +1
Query: 4 EHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGEDFDQRVIDYFSXXXXXXXXX 183
E ILVFDLGGGTFDVSLL ID GVFEVVATNGDTHLGGEDFDQRV+++F
Sbjct: 217 EKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGK 276
Query: 184 XXXXXXRAIQKLRREVEKAKRALSSVLTTRIEIESLIDGEDFSETLTRAKFEELNADLFK 363
RA+QKLRREVEKAKRALSS RIEIES +GEDFSETLTRAKFEELN DLF+
Sbjct: 277 DVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFR 336
Query: 364 STLIPVEKVLQDGGLKKTDIAEIVLVGGSTRIPKVQELVKGFFNGKEPNKGINPDEXXXX 543
ST+ PV+KVL+D LKK+DI EIVLVGGSTRIPK+Q+LVK FFNGKEP++GINPDE
Sbjct: 337 STMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAY 396
Query: 544 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGMELEGGVMAKLINRNTPIPTIKKXXXXXXXX 723
G+E GGVM KLI RNT +PT K
Sbjct: 397 GAAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASD 456
Query: 724 XXXXXXXXXYEGERQLVKDNHFLGQFDLTGIPPAPRGVPQIEVTFEIDANGILKVSA 894
YEGER L KDNH LG FDLTGIPPAPRGVPQIEVTFEID NGIL+V+A
Sbjct: 457 NQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTA 513
>sp|P11021|GRP78_HUMAN 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP) (Endoplasmic reticulum
lumenal Ca(2+) binding protein grp78)
Length = 654
Score = 345 bits (885), Expect = 1e-94
Identities = 186/297 (62%), Positives = 204/297 (68%)
Frame = +1
Query: 4 EHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGEDFDQRVIDYFSXXXXXXXXX 183
E ILVFDLGGGTFDVSLL ID GVFEVVATNGDTHLGGEDFDQRV+++F
Sbjct: 217 EKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGK 276
Query: 184 XXXXXXRAIQKLRREVEKAKRALSSVLTTRIEIESLIDGEDFSETLTRAKFEELNADLFK 363
RA+QKLRREVEKAKRALSS RIEIES +GEDFSETLTRAKFEELN DLF+
Sbjct: 277 DVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFR 336
Query: 364 STLIPVEKVLQDGGLKKTDIAEIVLVGGSTRIPKVQELVKGFFNGKEPNKGINPDEXXXX 543
ST+ PV+KVL+D LKK+DI EIVLVGGSTRIPK+Q+LVK FFNGKEP++GINPDE
Sbjct: 337 STMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAY 396
Query: 544 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGMELEGGVMAKLINRNTPIPTIKKXXXXXXXX 723
G+E GGVM KLI RNT +PT K
Sbjct: 397 GAAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASD 456
Query: 724 XXXXXXXXXYEGERQLVKDNHFLGQFDLTGIPPAPRGVPQIEVTFEIDANGILKVSA 894
YEGER L KDNH LG FDLTGIPPAPRGVPQIEVTFEID NGIL+V+A
Sbjct: 457 NQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTA 513
>sp|P19208|HSP7C_CAEBR Heat shock 70 kDa protein C precursor
Length = 661
Score = 344 bits (883), Expect = 2e-94
Identities = 183/297 (61%), Positives = 206/297 (69%)
Frame = +1
Query: 4 EHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGEDFDQRVIDYFSXXXXXXXXX 183
E ILVFDLGGGTFDVS+L ID GVFEV+ATNGDTHLGGEDFDQRV++YF
Sbjct: 222 ERNILVFDLGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSGK 281
Query: 184 XXXXXXRAIQKLRREVEKAKRALSSVLTTRIEIESLIDGEDFSETLTRAKFEELNADLFK 363
RA+QKLRREVEKAKRALS+ T++EIESL DGEDFSETLTRAKFEELN DLF+
Sbjct: 282 DLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFR 341
Query: 364 STLIPVEKVLQDGGLKKTDIAEIVLVGGSTRIPKVQELVKGFFNGKEPNKGINPDEXXXX 543
+TL PV+KVL+D LKK D+ EIVLVGGSTRIPKVQ+L+K FFNGKEP++GINPDE
Sbjct: 342 ATLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAY 401
Query: 544 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGMELEGGVMAKLINRNTPIPTIKKXXXXXXXX 723
G+E GGVM KLI+RNT IPT K
Sbjct: 402 GAAVQGGVISGEEDTGEIVLLDVNPLTMGIETVGGVMTKLISRNTVIPTKKSQVFSTAAD 461
Query: 724 XXXXXXXXXYEGERQLVKDNHFLGQFDLTGIPPAPRGVPQIEVTFEIDANGILKVSA 894
+EGER + KDNH LG+FDLTGIPPAPRGVPQIEVTFEID NGIL V+A
Sbjct: 462 NQPTVTIQVFEGERPMTKDNHQLGKFDLTGIPPAPRGVPQIEVTFEIDVNGILHVTA 518
>sp|P27420|HSP7C_CAEEL Heat shock 70 kDa protein C precursor
Length = 661
Score = 343 bits (880), Expect = 4e-94
Identities = 182/297 (61%), Positives = 205/297 (69%)
Frame = +1
Query: 4 EHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGEDFDQRVIDYFSXXXXXXXXX 183
E ILVFDLGGGTFDVS+L ID GVFEV+ATNGDTHLGGEDFDQRV++YF
Sbjct: 222 ERNILVFDLGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSGK 281
Query: 184 XXXXXXRAIQKLRREVEKAKRALSSVLTTRIEIESLIDGEDFSETLTRAKFEELNADLFK 363
RA+QKLRREVEKAKRALS+ T++EIESL DGEDFSETLTRAKFEELN DLF+
Sbjct: 282 DLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFR 341
Query: 364 STLIPVEKVLQDGGLKKTDIAEIVLVGGSTRIPKVQELVKGFFNGKEPNKGINPDEXXXX 543
+TL PV+KVL+D LKK D+ EIVLVGGSTRIPKVQ+L+K FFNGKEP++GINPDE
Sbjct: 342 ATLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAY 401
Query: 544 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGMELEGGVMAKLINRNTPIPTIKKXXXXXXXX 723
G+E GGVM KLI RNT IPT K
Sbjct: 402 GAAVQGGVISGEEDTGEIVLLDVNPLTMGIETVGGVMTKLIGRNTVIPTKKSQVFSTAAD 461
Query: 724 XXXXXXXXXYEGERQLVKDNHFLGQFDLTGIPPAPRGVPQIEVTFEIDANGILKVSA 894
+EGER + KDNH LG+FDLTG+PPAPRGVPQIEVTFEID NGIL V+A
Sbjct: 462 NQPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTA 518
>sp|Q91883|GRP78_XENLA 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 658
Score = 342 bits (876), Expect = 1e-93
Identities = 184/297 (61%), Positives = 203/297 (68%)
Frame = +1
Query: 4 EHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGEDFDQRVIDYFSXXXXXXXXX 183
E ILVFDLGGGTFDVSLL ID GVFEVVATNGDTHLGGEDFDQRV+++F
Sbjct: 218 EKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGK 277
Query: 184 XXXXXXRAIQKLRREVEKAKRALSSVLTTRIEIESLIDGEDFSETLTRAKFEELNADLFK 363
RA+QKLRREVEKAKRALS+ +RIEIES +GEDFSETLTRAKFEELN DLF+
Sbjct: 278 DVRADKRAVQKLRREVEKAKRALSAQHQSRIEIESFFEGEDFSETLTRAKFEELNMDLFR 337
Query: 364 STLIPVEKVLQDGGLKKTDIAEIVLVGGSTRIPKVQELVKGFFNGKEPNKGINPDEXXXX 543
ST+ PV+KVL D LKK+DI EIVLVGGSTRIPK+Q+LVK FNGKEP++GINPDE
Sbjct: 338 STMKPVQKVLDDSDLKKSDIDEIVLVGGSTRIPKIQQLVKELFNGKEPSRGINPDEAVAY 397
Query: 544 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGMELEGGVMAKLINRNTPIPTIKKXXXXXXXX 723
G+E GGVM KLI RNT +PT K
Sbjct: 398 GAAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASD 457
Query: 724 XXXXXXXXXYEGERQLVKDNHFLGQFDLTGIPPAPRGVPQIEVTFEIDANGILKVSA 894
YEGER L KDNH LG FDLTGIPPAPRGVPQIEVTFEID NGIL+V+A
Sbjct: 458 NQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTA 514
>sp|Q16956|GRP78_APLCA 78 kDa glucose-regulated protein precursor (GRP 78) (BiP) (Protein
1603)
Length = 667
Score = 340 bits (873), Expect = 2e-93
Identities = 183/297 (61%), Positives = 203/297 (68%)
Frame = +1
Query: 4 EHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGEDFDQRVIDYFSXXXXXXXXX 183
E ILVFDLGGGTFDVSLL ID GVFEVV+TNGDTHLGGEDFDQRV+++F
Sbjct: 226 EKNILVFDLGGGTFDVSLLTIDNGVFEVVSTNGDTHLGGEDFDQRVMEHFIKLYKKKKGK 285
Query: 184 XXXXXXRAIQKLRREVEKAKRALSSVLTTRIEIESLIDGEDFSETLTRAKFEELNADLFK 363
RA+QKLRREVEKAKRALSS R+EIES DGEDFSE+LTRAKFEELN DLF+
Sbjct: 286 DIRKDNRAVQKLRREVEKAKRALSSAHQVRLEIESFFDGEDFSESLTRAKFEELNMDLFR 345
Query: 364 STLIPVEKVLQDGGLKKTDIAEIVLVGGSTRIPKVQELVKGFFNGKEPNKGINPDEXXXX 543
ST+ PV++VL+D LK DI EIVLVGGSTRIPKVQ+LVK +FNGKEP++GINPDE
Sbjct: 346 STMKPVKQVLEDADLKTDDIDEIVLVGGSTRIPKVQQLVKEYFNGKEPSRGINPDEAVAY 405
Query: 544 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGMELEGGVMAKLINRNTPIPTIKKXXXXXXXX 723
G+E GGVM KLI RNT IPT K
Sbjct: 406 GAAVQAGVLSGEEDTGDLVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAAD 465
Query: 724 XXXXXXXXXYEGERQLVKDNHFLGQFDLTGIPPAPRGVPQIEVTFEIDANGILKVSA 894
YEGER + KDNH LG+FDLTGIPPAPRGVPQIEVTFEID NGILKV+A
Sbjct: 466 NQPTVTIQVYEGERSMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEIDVNGILKVTA 522
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.317 0.139 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,920,937
Number of Sequences: 369166
Number of extensions: 1503441
Number of successful extensions: 6180
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4873
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9030416440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)