Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_017_L13
(442 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 232 3e-61
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 229 2e-60
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 229 2e-60
sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cy... 229 3e-60
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 228 4e-60
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 221 4e-58
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 219 3e-57
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 219 3e-57
sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP... 215 4e-56
sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP... 201 4e-52
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 232 bits (591), Expect = 3e-61
Identities = 107/145 (73%), Positives = 119/145 (82%)
Frame = +3
Query: 3 SRFCCPASQCPIIDKNWESPDGVPISAVIFGGRRPERVPLVYETLNWQHGVFTGACVRSE 182
SRFC PASQCPIID WESP+GVPI +IFGGRRPE VPLVYE L+WQHGVF GA +RSE
Sbjct: 404 SRFCTPASQCPIIDPAWESPEGVPIEGIIFGGRRPEGVPLVYEALSWQHGVFVGAAMRSE 463
Query: 183 ATAAAEHKGKVIMNDPFAMRPFFGYNFGDYLKHWLSFAHESHYKLPRIYHVYWFRISKED 362
ATAAAEHKGK+IM+DPFAMRPFFGYNFG YL HWLS AH KLP+I+HV WFR K D
Sbjct: 464 ATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLSMAHRPAAKLPKIFHVNWFRKDK-D 522
Query: 363 GSFLWPGFRENSRVLDCIAKRVAGK 437
G FLWPGF ENSRVL+ + R+ G+
Sbjct: 523 GKFLWPGFGENSRVLEWMFGRIEGE 547
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 229 bits (585), Expect = 2e-60
Identities = 107/146 (73%), Positives = 118/146 (80%)
Frame = +3
Query: 3 SRFCCPASQCPIIDKNWESPDGVPISAVIFGGRRPERVPLVYETLNWQHGVFTGACVRSE 182
SRFC PASQCPIID WESP+GVPI +IFGGRRP VPLVYE L+WQHGVF GA +RSE
Sbjct: 404 SRFCTPASQCPIIDAAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSE 463
Query: 183 ATAAAEHKGKVIMNDPFAMRPFFGYNFGDYLKHWLSFAHESHYKLPRIYHVYWFRISKED 362
ATAAAEHKGK+IM+DPFAMRPFFGYNFG YL HWLS A KLP+I+HV WFR KE
Sbjct: 464 ATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLSMAQHPAAKLPKIFHVNWFRKDKE- 522
Query: 363 GSFLWPGFRENSRVLDCIAKRVAGKA 440
G FLWPGF ENSRVL+ + R+ GKA
Sbjct: 523 GKFLWPGFGENSRVLEWMFNRIDGKA 548
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 229 bits (585), Expect = 2e-60
Identities = 107/146 (73%), Positives = 118/146 (80%)
Frame = +3
Query: 3 SRFCCPASQCPIIDKNWESPDGVPISAVIFGGRRPERVPLVYETLNWQHGVFTGACVRSE 182
SRFC PASQCPIID WESP+GVPI +IFGGRRP VPLVYE L+WQHGVF GA +RSE
Sbjct: 404 SRFCTPASQCPIIDAAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSE 463
Query: 183 ATAAAEHKGKVIMNDPFAMRPFFGYNFGDYLKHWLSFAHESHYKLPRIYHVYWFRISKED 362
ATAAAEHKGK+IM+DPFAMRPFFGYNFG YL HWLS A KLP+I+HV WFR KE
Sbjct: 464 ATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLSMAQHPAAKLPKIFHVNWFRKDKE- 522
Query: 363 GSFLWPGFRENSRVLDCIAKRVAGKA 440
G FLWPGF ENSRVL+ + R+ GKA
Sbjct: 523 GKFLWPGFGENSRVLEWMFNRIDGKA 548
>sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 229 bits (583), Expect = 3e-60
Identities = 105/146 (71%), Positives = 116/146 (79%)
Frame = +3
Query: 3 SRFCCPASQCPIIDKNWESPDGVPISAVIFGGRRPERVPLVYETLNWQHGVFTGACVRSE 182
SRFC PASQCPI+D WESP+GVPI +IFGGRRP VPLVYE NWQHGVF GA +RSE
Sbjct: 404 SRFCTPASQCPIMDPAWESPEGVPIEGIIFGGRRPAGVPLVYEAFNWQHGVFIGAAMRSE 463
Query: 183 ATAAAEHKGKVIMNDPFAMRPFFGYNFGDYLKHWLSFAHESHYKLPRIYHVYWFRISKED 362
ATAAAEHKGK+IM+DPFAMRPFFGYNFG YL HWLS AH KLPRI+HV WFR
Sbjct: 464 ATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLSMAHRPAAKLPRIFHVNWFR-KDSQ 522
Query: 363 GSFLWPGFRENSRVLDCIAKRVAGKA 440
G FLWPG+ ENSRVL+ + R+ GKA
Sbjct: 523 GKFLWPGYGENSRVLEWMFNRIQGKA 548
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 228 bits (581), Expect = 4e-60
Identities = 106/145 (73%), Positives = 118/145 (81%)
Frame = +3
Query: 3 SRFCCPASQCPIIDKNWESPDGVPISAVIFGGRRPERVPLVYETLNWQHGVFTGACVRSE 182
SRFC PASQCPIID WESP+GVPI +IFGGRRP VPLVYE L+WQHGVF GA +RSE
Sbjct: 404 SRFCTPASQCPIIDPAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSE 463
Query: 183 ATAAAEHKGKVIMNDPFAMRPFFGYNFGDYLKHWLSFAHESHYKLPRIYHVYWFRISKED 362
ATAAAEHKGKVIM+DPFAMRPFFGYNFG YL HWLS AH KLP+I+HV WFR K +
Sbjct: 464 ATAAAEHKGKVIMHDPFAMRPFFGYNFGKYLAHWLSMAHRPAAKLPKIFHVNWFRKDK-N 522
Query: 363 GSFLWPGFRENSRVLDCIAKRVAGK 437
G FLWPGF ENSRVL+ + R+ G+
Sbjct: 523 GKFLWPGFGENSRVLEWMFGRIEGE 547
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 221 bits (564), Expect = 4e-58
Identities = 104/145 (71%), Positives = 116/145 (80%)
Frame = +3
Query: 3 SRFCCPASQCPIIDKNWESPDGVPISAVIFGGRRPERVPLVYETLNWQHGVFTGACVRSE 182
SRFC PASQCPIID +WESP+GVPI +IFGGRRP VPLVYE L+WQHGVF GA +RSE
Sbjct: 404 SRFCTPASQCPIIDPDWESPEGVPIEGIIFGGRRPVGVPLVYEALSWQHGVFVGAAMRSE 463
Query: 183 ATAAAEHKGKVIMNDPFAMRPFFGYNFGDYLKHWLSFAHESHYKLPRIYHVYWFRISKED 362
ATAAAE+KGKVIM+DPFAM PFFGYNFG YL HWLS A KLP+I+HV WFR K
Sbjct: 464 ATAAAEYKGKVIMHDPFAMGPFFGYNFGQYLAHWLSMAQRPAAKLPKIFHVNWFRKDKA- 522
Query: 363 GSFLWPGFRENSRVLDCIAKRVAGK 437
G FLWPGF ENSRVL+ + RV G+
Sbjct: 523 GRFLWPGFGENSRVLEWMFNRVVGE 547
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 219 bits (557), Expect = 3e-57
Identities = 99/145 (68%), Positives = 117/145 (80%)
Frame = +3
Query: 3 SRFCCPASQCPIIDKNWESPDGVPISAVIFGGRRPERVPLVYETLNWQHGVFTGACVRSE 182
SRFC PA QCPI+D WE+P+GVPI A+IFGGRRP+ VPLVYE NW+HGVF G+ +RSE
Sbjct: 422 SRFCVPARQCPIMDPAWEAPEGVPIDAIIFGGRRPKGVPLVYEAFNWRHGVFVGSAMRSE 481
Query: 183 ATAAAEHKGKVIMNDPFAMRPFFGYNFGDYLKHWLSFAHESHYKLPRIYHVYWFRISKED 362
+TAAAEHKGK IM+DPFAMRPFFGYNFG YL+HWLS + +LPRI+HV WFR E
Sbjct: 482 STAAAEHKGKTIMHDPFAMRPFFGYNFGRYLEHWLSMEGQKGARLPRIFHVNWFR-RDEA 540
Query: 363 GSFLWPGFRENSRVLDCIAKRVAGK 437
G FLWPGF EN+RVLD I +R+ G+
Sbjct: 541 GRFLWPGFGENARVLDWICRRLEGE 565
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 219 bits (557), Expect = 3e-57
Identities = 99/145 (68%), Positives = 116/145 (80%)
Frame = +3
Query: 3 SRFCCPASQCPIIDKNWESPDGVPISAVIFGGRRPERVPLVYETLNWQHGVFTGACVRSE 182
SRFC PA QCPI+D WE+P+GVPI A+IFGGRRP+ VPLVYE NW+HGVF G +RSE
Sbjct: 422 SRFCAPARQCPIMDPAWEAPEGVPIDAIIFGGRRPKGVPLVYEAFNWRHGVFVGRAMRSE 481
Query: 183 ATAAAEHKGKVIMNDPFAMRPFFGYNFGDYLKHWLSFAHESHYKLPRIYHVYWFRISKED 362
+TAAAEHKGK+IM+DPFAMRPFFGYNFG YL+HWLS +LPRI+HV WFR E
Sbjct: 482 STAAAEHKGKIIMHDPFAMRPFFGYNFGHYLEHWLSMEGRKGAQLPRIFHVNWFR-RDEA 540
Query: 363 GSFLWPGFRENSRVLDCIAKRVAGK 437
G FLWPGF EN+RVLD I +R+ G+
Sbjct: 541 GHFLWPGFGENARVLDWICRRLEGE 565
>sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 647
Score = 215 bits (547), Expect = 4e-56
Identities = 100/146 (68%), Positives = 119/146 (81%)
Frame = +3
Query: 3 SRFCCPASQCPIIDKNWESPDGVPISAVIFGGRRPERVPLVYETLNWQHGVFTGACVRSE 182
SRFC PA+QCPIID+ WE P GVPISA++FGGRRP VPL+YE +W HGVF GA +RSE
Sbjct: 430 SRFCTPAAQCPIIDEAWEDPAGVPISAMLFGGRRPAGVPLIYEARDWTHGVFIGAAMRSE 489
Query: 183 ATAAAEHKGKVIMNDPFAMRPFFGYNFGDYLKHWLSFAHESHYKLPRIYHVYWFRISKED 362
ATAAAEHKGKVIM+DPFAMRPFFGYNFGDY+ HWLS E ++P+I+HV WFR S E
Sbjct: 490 ATAAAEHKGKVIMHDPFAMRPFFGYNFGDYVAHWLSM--EKRGQVPKIFHVNWFRKSAE- 546
Query: 363 GSFLWPGFRENSRVLDCIAKRVAGKA 440
G F+WPG+ ENSRVL+ I +RV G++
Sbjct: 547 GKFMWPGYGENSRVLEWILRRVNGES 572
>sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 619
Score = 201 bits (512), Expect = 4e-52
Identities = 91/145 (62%), Positives = 111/145 (76%)
Frame = +3
Query: 3 SRFCCPASQCPIIDKNWESPDGVPISAVIFGGRRPERVPLVYETLNWQHGVFTGACVRSE 182
SRF PASQCPII WESP GVPI A+IFGGRRP VPLV+ET +W HG+FTGAC++SE
Sbjct: 400 SRFAAPASQCPIIHPEWESPKGVPIDAIIFGGRRPAGVPLVFETRSWLHGIFTGACLKSE 459
Query: 183 ATAAAEHKGKVIMNDPFAMRPFFGYNFGDYLKHWLSFAHESHYKLPRIYHVYWFRISKED 362
ATAAAEHKGK +M+DP AMRPF GYNFG YL+HW+ + K+P+IYHV WFR +
Sbjct: 460 ATAAAEHKGKTVMHDPMAMRPFMGYNFGHYLQHWIDLNKDGR-KVPKIYHVNWFR-RDAN 517
Query: 363 GSFLWPGFRENSRVLDCIAKRVAGK 437
FLWPG+ +N RV+D I +R+ G+
Sbjct: 518 NKFLWPGYGQNIRVIDWIVRRLDGE 542
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,255,250
Number of Sequences: 369166
Number of extensions: 975830
Number of successful extensions: 2669
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2594
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2294548080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)