Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_017_L06
(892 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3) 580 e-165
sp|P30163|ACT2_ONCVO Actin-2 580 e-165
sp|P30162|ACT1_ONCVO Actin-1 580 e-165
sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cyt... 580 e-165
sp|P41340|ACT3_LIMPO Actin-3 580 e-165
sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin) >gi|... 579 e-165
sp|P53458|ACT5_DIPDE Actin-5 579 e-165
sp|P79818|ACTB_ORYLA Actin, cytoplasmic 1 (Beta-actin) (OlCA1) 579 e-165
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 579 e-165
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 579 e-165
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
Length = 375
Score = 580 bits (1496), Expect = e-165
Identities = 285/297 (95%), Positives = 292/297 (98%)
Frame = +1
Query: 1 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 180
APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 26 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 85
Query: 181 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS 360
WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 86 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 145
Query: 361 GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 540
GRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE
Sbjct: 146 GRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205
Query: 541 REIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPS 720
REIVRDIKEKLCY+ALDF+ EM TAS+SSSLEKSYELPDGQVITIGNERFRCPEALFQPS
Sbjct: 206 REIVRDIKEKLCYVALDFEQEMATASSSSSLEKSYELPDGQVITIGNERFRCPEALFQPS 265
Query: 721 FLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAP 891
FLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMYPGIADRMQKEI+ALAP
Sbjct: 266 FLGMESSGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 322
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 580 bits (1496), Expect = e-165
Identities = 284/297 (95%), Positives = 292/297 (98%)
Frame = +1
Query: 1 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 180
APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Query: 181 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS 360
WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 87 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 146
Query: 361 GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 540
GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE
Sbjct: 147 GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
Query: 541 REIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPS 720
REIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVIT+GNERFRCPEALFQPS
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPS 266
Query: 721 FLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAP 891
FLG+ES GIHETTYNSIMKCD+DIRKDLYAN VLSGGSTMYPGIADRMQKEI+ALAP
Sbjct: 267 FLGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGSTMYPGIADRMQKEITALAP 323
>sp|P30162|ACT1_ONCVO Actin-1
Length = 376
Score = 580 bits (1495), Expect = e-165
Identities = 282/297 (94%), Positives = 293/297 (98%)
Frame = +1
Query: 1 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 180
APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Query: 181 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS 360
WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 87 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 146
Query: 361 GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 540
GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE
Sbjct: 147 GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
Query: 541 REIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPS 720
REIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVIT+GNERFRCPEALFQPS
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPS 266
Query: 721 FLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAP 891
FLG+ES GIHE+TYNSIMKCD+DIRKDLYANIVLSGG+TMYPGIADRMQKE++ALAP
Sbjct: 267 FLGMESAGIHESTYNSIMKCDIDIRKDLYANIVLSGGTTMYPGIADRMQKEVTALAP 323
>sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cytoplasmic beta actin)
Length = 375
Score = 580 bits (1494), Expect = e-165
Identities = 284/297 (95%), Positives = 292/297 (98%)
Frame = +1
Query: 1 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 180
APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 26 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 85
Query: 181 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS 360
WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 86 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 145
Query: 361 GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 540
GRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE
Sbjct: 146 GRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205
Query: 541 REIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPS 720
REIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPS
Sbjct: 206 REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPS 265
Query: 721 FLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAP 891
FLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMYPGIADRMQKEI+ALAP
Sbjct: 266 FLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 322
>sp|P41340|ACT3_LIMPO Actin-3
Length = 376
Score = 580 bits (1494), Expect = e-165
Identities = 284/297 (95%), Positives = 292/297 (98%)
Frame = +1
Query: 1 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 180
APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Query: 181 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS 360
WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 87 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 146
Query: 361 GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 540
GRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE
Sbjct: 147 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
Query: 541 REIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPS 720
REIVRDIKEKLCY+ALDFD EM TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPS
Sbjct: 207 REIVRDIKEKLCYVALDFDQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPS 266
Query: 721 FLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAP 891
FLG+ES GIHETTYNSIMKCD+DIRKDLYAN VLSGG+TMYPGIADRMQKEI+ALAP
Sbjct: 267 FLGMESSGIHETTYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 323
>sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin)
sp|P68142|ACT1_FUGRU Actin, cytoplasmic 1 (Beta-actin-1)
Length = 375
Score = 579 bits (1493), Expect = e-165
Identities = 284/297 (95%), Positives = 292/297 (98%)
Frame = +1
Query: 1 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 180
APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 26 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 85
Query: 181 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS 360
WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 86 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 145
Query: 361 GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 540
GRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE
Sbjct: 146 GRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205
Query: 541 REIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPS 720
REIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPS
Sbjct: 206 REIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPS 265
Query: 721 FLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAP 891
FLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMYPGIADRMQKEI+ALAP
Sbjct: 266 FLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 322
>sp|P53458|ACT5_DIPDE Actin-5
Length = 371
Score = 579 bits (1493), Expect = e-165
Identities = 284/297 (95%), Positives = 292/297 (98%)
Frame = +1
Query: 1 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 180
APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 22 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 81
Query: 181 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS 360
WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 82 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYAS 141
Query: 361 GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 540
GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE
Sbjct: 142 GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 201
Query: 541 REIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPS 720
REIVRDIKEKLCY+ALDF+ EM A++SS+LEKSYELPDGQVITIGNERFRCPEALFQPS
Sbjct: 202 REIVRDIKEKLCYVALDFEQEMSNAASSSALEKSYELPDGQVITIGNERFRCPEALFQPS 261
Query: 721 FLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAP 891
FLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMYPGI+DRMQKEISALAP
Sbjct: 262 FLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGISDRMQKEISALAP 318
>sp|P79818|ACTB_ORYLA Actin, cytoplasmic 1 (Beta-actin) (OlCA1)
Length = 375
Score = 579 bits (1493), Expect = e-165
Identities = 283/297 (95%), Positives = 293/297 (98%)
Frame = +1
Query: 1 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 180
APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 26 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 85
Query: 181 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS 360
WHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 86 WHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYAS 145
Query: 361 GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 540
GRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE
Sbjct: 146 GRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205
Query: 541 REIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPS 720
REIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPS
Sbjct: 206 REIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPS 265
Query: 721 FLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAP 891
FLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMYPGIADRMQKEI+ALAP
Sbjct: 266 FLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 322
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 579 bits (1493), Expect = e-165
Identities = 283/297 (95%), Positives = 292/297 (98%)
Frame = +1
Query: 1 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 180
APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Query: 181 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS 360
WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 87 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 146
Query: 361 GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 540
GRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAE
Sbjct: 147 GRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
Query: 541 REIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPS 720
REIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+FQPS
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPS 266
Query: 721 FLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAP 891
FLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAP
Sbjct: 267 FLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAP 323
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 579 bits (1493), Expect = e-165
Identities = 283/297 (95%), Positives = 293/297 (98%)
Frame = +1
Query: 1 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 180
APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 27 APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Query: 181 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS 360
WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 87 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 146
Query: 361 GRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 540
GRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAE
Sbjct: 147 GRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
Query: 541 REIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPS 720
REIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPS
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITIGNERFRCPEALFQPS 266
Query: 721 FLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAP 891
FLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAP
Sbjct: 267 FLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAP 323
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,424,526
Number of Sequences: 369166
Number of extensions: 2140772
Number of successful extensions: 6794
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6633
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8934348180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)