Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_017_G03
(839 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 456 e-128
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 456 e-128
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 456 e-128
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 456 e-128
sp|P02552|TBA1_CHICK Tubulin alpha-1 chain 456 e-128
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 454 e-127
sp|P68368|TBA4_MOUSE Tubulin alpha-4 chain (Alpha-tubulin 4... 453 e-127
sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1... 453 e-127
sp|P52273|TBA_BOMMO Tubulin alpha chain 453 e-127
sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain 453 e-127
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 456 bits (1172), Expect = e-128
Identities = 216/249 (86%), Positives = 231/249 (92%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGAL 182
LTTHTTLEHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLIGQIVSSITASLRFDGAL
Sbjct: 189 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 248
Query: 183 NVDLNEFQTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPR 362
NVDL EFQTNLVPYPRIHFPLATYAP+I A++A+HEQLSVAEITN+CFE NQMVKCDPR
Sbjct: 249 NVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR 308
Query: 363 NGKYMSCCLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDM 542
+GKYM+CC+LYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+
Sbjct: 309 HGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 368
Query: 543 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAAL 722
AKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAAL
Sbjct: 369 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 428
Query: 723 EKDYEEVGM 749
EKDYEEVG+
Sbjct: 429 EKDYEEVGV 437
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 456 bits (1172), Expect = e-128
Identities = 216/249 (86%), Positives = 231/249 (92%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGAL 182
LTTHTTLEHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLIGQIVSSITASLRFDGAL
Sbjct: 189 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 248
Query: 183 NVDLNEFQTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPR 362
NVDL EFQTNLVPYPRIHFPLATYAP+I A++A+HEQLSVAEITN+CFE NQMVKCDPR
Sbjct: 249 NVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR 308
Query: 363 NGKYMSCCLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDM 542
+GKYM+CCLLYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+
Sbjct: 309 HGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 368
Query: 543 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAAL 722
AKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARED+AAL
Sbjct: 369 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAAL 428
Query: 723 EKDYEEVGM 749
EKDYEEVG+
Sbjct: 429 EKDYEEVGV 437
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 456 bits (1172), Expect = e-128
Identities = 216/249 (86%), Positives = 230/249 (92%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGAL 182
LTTHTTLEHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLIGQIVSSITASLRFDGAL
Sbjct: 189 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 248
Query: 183 NVDLNEFQTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPR 362
NVDL EFQTNLVPYPRIHFPL TYAP+I A++A+HEQLSVAEITN+CFE NQMVKCDPR
Sbjct: 249 NVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR 308
Query: 363 NGKYMSCCLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDM 542
+GKYM+CC+LYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+
Sbjct: 309 HGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 368
Query: 543 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAAL 722
AKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAAL
Sbjct: 369 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 428
Query: 723 EKDYEEVGM 749
EKDYEEVGM
Sbjct: 429 EKDYEEVGM 437
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 456 bits (1172), Expect = e-128
Identities = 216/249 (86%), Positives = 231/249 (92%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGAL 182
LTTHTTLEHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLIGQIVSSITASLRFDGAL
Sbjct: 189 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 248
Query: 183 NVDLNEFQTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPR 362
NVDL EFQTNLVPYPRIHFPLATYAP+I A++A+HEQL+VAEITN+CFE NQMVKCDPR
Sbjct: 249 NVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPR 308
Query: 363 NGKYMSCCLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDM 542
+GKYMSCC+LYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+
Sbjct: 309 HGKYMSCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 368
Query: 543 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAAL 722
AKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAAL
Sbjct: 369 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 428
Query: 723 EKDYEEVGM 749
EKDYEEVG+
Sbjct: 429 EKDYEEVGV 437
>sp|P02552|TBA1_CHICK Tubulin alpha-1 chain
Length = 412
Score = 456 bits (1172), Expect = e-128
Identities = 216/249 (86%), Positives = 231/249 (92%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGAL 182
LTTHTTLEHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLIGQIVSSITASLRFDGAL
Sbjct: 150 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 209
Query: 183 NVDLNEFQTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPR 362
NVDL EFQTNLVPYPRIHFPLATYAP+I A++A+HEQLSVAEITN+CFE NQMVKCDPR
Sbjct: 210 NVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR 269
Query: 363 NGKYMSCCLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDM 542
+GKYM+CCLLYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+
Sbjct: 270 HGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 329
Query: 543 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAAL 722
AKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARED+AAL
Sbjct: 330 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAAL 389
Query: 723 EKDYEEVGM 749
EKDYEEVG+
Sbjct: 390 EKDYEEVGV 398
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 454 bits (1168), Expect = e-127
Identities = 215/249 (86%), Positives = 231/249 (92%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGAL 182
LTTHTTLEHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLIGQIVSSITASLRFDGAL
Sbjct: 189 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 248
Query: 183 NVDLNEFQTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPR 362
NVDL EFQTNLVPYPRIHFPLATYAP+I A++A+HEQL+V+EITN+CFE NQMVKCDPR
Sbjct: 249 NVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPANQMVKCDPR 308
Query: 363 NGKYMSCCLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDM 542
+GKYM+CCLLYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+
Sbjct: 309 HGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 368
Query: 543 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAAL 722
AKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAAL
Sbjct: 369 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 428
Query: 723 EKDYEEVGM 749
EKDYEEVG+
Sbjct: 429 EKDYEEVGV 437
>sp|P68368|TBA4_MOUSE Tubulin alpha-4 chain (Alpha-tubulin 4) (Alpha-tubulin isotype
M-alpha-4)
sp|P68367|TBA1_MACFA Tubulin alpha-1 chain (Alpha-tubulin 1) (Testis-specific
alpha-tubulin)
sp|P68366|TBA1_HUMAN Tubulin alpha-1 chain (Alpha-tubulin 1) (Testis-specific
alpha-tubulin) (Tubulin H2-alpha)
Length = 448
Score = 453 bits (1166), Expect = e-127
Identities = 215/249 (86%), Positives = 230/249 (92%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGAL 182
LTTHTTLEHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLI QIVSSITASLRFDGAL
Sbjct: 189 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGAL 248
Query: 183 NVDLNEFQTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPR 362
NVDL EFQTNLVPYPRIHFPLATYAP+I A++A+HEQLSVAEITN+CFE NQMVKCDPR
Sbjct: 249 NVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR 308
Query: 363 NGKYMSCCLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDM 542
+GKYM+CCLLYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+
Sbjct: 309 HGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDL 368
Query: 543 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAAL 722
AKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARED+AAL
Sbjct: 369 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAAL 428
Query: 723 EKDYEEVGM 749
EKDYEEVG+
Sbjct: 429 EKDYEEVGI 437
>sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin I)
sp|P68363|TBAK_HUMAN Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
K-alpha-1)
sp|P05213|TBA2_MOUSE Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin isotype
M-alpha-2)
sp|P68360|TBA1_MERUN Tubulin alpha-1 chain (Alpha-tubulin 1)
sp|Q6P9V9|TBA2_RAT Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 451
Score = 453 bits (1166), Expect = e-127
Identities = 215/249 (86%), Positives = 230/249 (92%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGAL 182
LTTHTTLEHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLI QIVSSITASLRFDGAL
Sbjct: 189 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGAL 248
Query: 183 NVDLNEFQTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPR 362
NVDL EFQTNLVPYPRIHFPLATYAP+I A++A+HEQLSVAEITN+CFE NQMVKCDPR
Sbjct: 249 NVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR 308
Query: 363 NGKYMSCCLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDM 542
+GKYM+CCLLYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+
Sbjct: 309 HGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDL 368
Query: 543 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAAL 722
AKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARED+AAL
Sbjct: 369 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAAL 428
Query: 723 EKDYEEVGM 749
EKDYEEVG+
Sbjct: 429 EKDYEEVGV 437
>sp|P52273|TBA_BOMMO Tubulin alpha chain
Length = 450
Score = 453 bits (1165), Expect = e-127
Identities = 215/249 (86%), Positives = 229/249 (91%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGAL 182
LTTHTTLEHSDCAFMVDNEAIYDIC++NL IE PTYT+LNRLIGQIVSSITASLRFDGAL
Sbjct: 189 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEPPTYTNLNRLIGQIVSSITASLRFDGAL 248
Query: 183 NVDLNEFQTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPR 362
NVDL EFQTNLVPYPRIHFPL TYAP+I A++A+HEQLSVAEITN+CFE NQMVKCDPR
Sbjct: 249 NVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR 308
Query: 363 NGKYMSCCLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDM 542
+GKYM+CC+LYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+
Sbjct: 309 HGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 368
Query: 543 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAAL 722
AKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAAL
Sbjct: 369 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 428
Query: 723 EKDYEEVGM 749
EKDYEEVGM
Sbjct: 429 EKDYEEVGM 437
>sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain
Length = 451
Score = 453 bits (1165), Expect = e-127
Identities = 214/249 (85%), Positives = 231/249 (92%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGAL 182
LTTHTTLEHSDCAFMVDNEAIYDIC++NL IERP+YT+LNRLIGQIVSSITASLRFDGAL
Sbjct: 189 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGAL 248
Query: 183 NVDLNEFQTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPR 362
NVDL EFQTNLVPYPRIHFPLATYAP+I A++A+HEQLSVAEITN+CFE NQ+VKCDPR
Sbjct: 249 NVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQLVKCDPR 308
Query: 363 NGKYMSCCLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDM 542
+GKYM+CC+LYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+
Sbjct: 309 HGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 368
Query: 543 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAAL 722
AKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAAL
Sbjct: 369 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 428
Query: 723 EKDYEEVGM 749
EKDYEEVG+
Sbjct: 429 EKDYEEVGV 437
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,073,525
Number of Sequences: 369166
Number of extensions: 1692677
Number of successful extensions: 4621
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4371
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8197207050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)