Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_017_E16
(739 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9UEW8|STK39_HUMAN STE20/SPS1-related proline-alanine-ri... 57 4e-08
sp|Q863I2|OXSR1_PIG Serine/threonine-protein kinase OSR1 (O... 56 1e-07
sp|Q6P9R2|OXSR1_MOUSE Serine/threonine-protein kinase OSR1 ... 56 1e-07
sp|O95747|OXSR1_HUMAN Serine/threonine-protein kinase OSR1 ... 55 1e-07
sp|Q5R495|OXSR1_PONPY Serine/threonine-protein kinase OSR1 ... 55 1e-07
sp|Q9Z1W9|STK39_MOUSE STE20/SPS1-related proline-alanine-ri... 52 1e-06
sp|O88506|STK39_RAT STE20/SPS1-related proline-alanine-rich... 51 3e-06
sp|P57994|MURC_MYCLE UDP-N-acetylmuramate--L-alanine ligase... 32 1.8
sp|Q44774|FTSA_BORBU Cell division protein ftsA 32 2.3
sp|Q01222|VB18_VACCV Ankyrin repeat protein B18 30 6.7
>sp|Q9UEW8|STK39_HUMAN STE20/SPS1-related proline-alanine-rich protein kinase (Ste-20
related kinase) (Serine/threonine-protein kinase 39)
(DCHT)
Length = 547
Score = 57.4 bits (137), Expect = 4e-08
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Frame = +3
Query: 99 DEKQEKNPKDFSGEWNFDIKGKNXXXXXX----------------EDPPGPKTKTSTAEN 230
DEK E+ FS E + +K +N + PP A +
Sbjct: 392 DEKSEEGKAAFSQEKSRRVKEENPEIAVSASTIPEQIQSLSVHDSQGPPNANEDYREASS 451
Query: 231 VFYRITLRKRNPKQNNELQDISFIYVLGKDSVDVLARELVEADLLDGCDLLLVAHNLSEL 410
+ LR RN ++ EL DI F + G+D+ D +++EL A L+DG D+++VA NL ++
Sbjct: 452 CAVNLVLRLRNSRK--ELNDIRFEFTPGRDTADGVSQELFSAGLVDGHDVVIVAANLQKI 509
Query: 411 VAEP-TMRERVFALNSP-PASGVINEADLNGYAKV 509
V +P ++ F L S S + +E L G+A++
Sbjct: 510 VDDPKALKTLTFKLASGCDGSEIPDEVKLIGFAQL 544
>sp|Q863I2|OXSR1_PIG Serine/threonine-protein kinase OSR1 (Oxidative stress-responsive 1
protein)
Length = 529
Score = 55.8 bits (133), Expect = 1e-07
Identities = 35/91 (38%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Frame = +3
Query: 243 ITLRKRNPKQNNELQDISFIYVLGKDSVDVLARELVEADLLDGCDLLLVAHNLSELVAEP 422
+ LR RN K+ EL DI F + G+D+ + +++EL+ A L+DG DL++VA NL ++V EP
Sbjct: 438 LVLRLRNSKK--ELNDIRFEFTPGRDTAEGVSQELISAGLVDGRDLVIVAANLQKIVEEP 495
Query: 423 -TMRERVFALNS-PPASGVINEADLNGYAKV 509
+ R F L S S + +++ L G+A++
Sbjct: 496 QSNRSVTFKLASGVEGSDIPDDSKLIGFAQL 526
>sp|Q6P9R2|OXSR1_MOUSE Serine/threonine-protein kinase OSR1 (Oxidative stress-responsive 1
protein)
Length = 527
Score = 55.8 bits (133), Expect = 1e-07
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Frame = +3
Query: 192 PPGPKTKTSTAENVFYR---------ITLRKRNPKQNNELQDISFIYVLGKDSVDVLARE 344
PP K + A++ R + LR RN K+ EL DI F + G+D+ + +++E
Sbjct: 410 PPAEPAKPAQAQSSGERSQETKIPISLVLRLRNSKK--ELNDIRFEFTPGRDTAEGVSQE 467
Query: 345 LVEADLLDGCDLLLVAHNLSELVAEP-TMRERVFALNS-PPASGVINEADLNGYAKV 509
L+ A L+DG DL++VA NL ++V EP + R F L S S + ++ L G+A++
Sbjct: 468 LISAGLVDGRDLVIVAANLQKIVEEPQSNRSVTFKLASGVEGSDIPDDGKLIGFAQL 524
>sp|O95747|OXSR1_HUMAN Serine/threonine-protein kinase OSR1 (Oxidative stress-responsive 1
protein)
Length = 527
Score = 55.5 bits (132), Expect = 1e-07
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = +3
Query: 243 ITLRKRNPKQNNELQDISFIYVLGKDSVDVLARELVEADLLDGCDLLLVAHNLSELVAEP 422
+ LR RN K+ EL DI F + G+D+ + +++EL+ A L+DG DL++VA NL ++V EP
Sbjct: 436 LVLRLRNSKK--ELNDIRFEFTPGRDTAEGVSQELISAGLVDGRDLVIVAANLQKIVEEP 493
Query: 423 -TMRERVFALNS-PPASGVINEADLNGYAKV 509
+ R F L S S + ++ L G+A++
Sbjct: 494 QSNRSVTFKLASGVEGSDIPDDGKLIGFAQL 524
>sp|Q5R495|OXSR1_PONPY Serine/threonine-protein kinase OSR1 (Oxidative stress-responsive 1
protein)
Length = 527
Score = 55.5 bits (132), Expect = 1e-07
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = +3
Query: 243 ITLRKRNPKQNNELQDISFIYVLGKDSVDVLARELVEADLLDGCDLLLVAHNLSELVAEP 422
+ LR RN K+ EL DI F + G+D+ + +++EL+ A L+DG DL++VA NL ++V EP
Sbjct: 436 LVLRLRNSKK--ELNDIRFEFTPGRDTAEGVSQELISAGLVDGRDLVIVAANLQKIVEEP 493
Query: 423 -TMRERVFALNS-PPASGVINEADLNGYAKV 509
+ R F L S S + ++ L G+A++
Sbjct: 494 QSNRSVTFKLASGVEGSDIPDDGKLIGFAQL 524
>sp|Q9Z1W9|STK39_MOUSE STE20/SPS1-related proline-alanine-rich protein kinase (Ste-20
related kinase) (Serine/threonine-protein kinase 39)
Length = 556
Score = 52.4 bits (124), Expect = 1e-06
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = +3
Query: 243 ITLRKRNPKQNNELQDISFIYVLGKDSVDVLARELVEADLLDGCDLLLVAHNLSELVAEP 422
+ LR RN ++ EL DI F + G+D+ D +++EL A L+DG D+++VA NL ++V +P
Sbjct: 465 LVLRLRNSRK--ELNDIRFEFTPGRDTADGVSQELFSAGLVDGHDVVIVAANLQKIVDDP 522
Query: 423 -TMRERVFALNSP-PASGVINEADLNGYAKV 509
++ F L S S + +E L G+A++
Sbjct: 523 KALKTLTFKLASGCDGSEIPDEVKLIGFAQL 553
>sp|O88506|STK39_RAT STE20/SPS1-related proline-alanine-rich protein kinase (Ste-20
related kinase) (Serine/threonine-protein kinase 39)
(Pancreatic serine/threonine-protein kinase) (PS/TK)
(PSTK1)
Length = 553
Score = 51.2 bits (121), Expect = 3e-06
Identities = 32/91 (35%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = +3
Query: 243 ITLRKRNPKQNNELQDISFIYVLGKDSVDVLARELVEADLLDGCDLLLVAHNLSELVAEP 422
+ LR RN ++ EL DI F + G+D+ D +++EL A L+DG D+++VA NL ++V +P
Sbjct: 462 LVLRLRNSRK--ELNDIRFEFTPGRDTADGVSQELFSAGLVDGHDVVIVAANLQKIVDDP 519
Query: 423 -TMRERVFALNSP-PASGVINEADLNGYAKV 509
++ F L S + + +E L G+A++
Sbjct: 520 KALKTLTFKLASGCDGAEIPDEVKLIGFAQL 550
>sp|P57994|MURC_MYCLE UDP-N-acetylmuramate--L-alanine ligase
(UDP-N-acetylmuramoyl-L-alanine synthetase)
Length = 495
Score = 32.0 bits (71), Expect = 1.8
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 243 ITLRKRNPKQNNELQDISFIYVLGKDSVDVLARELVEADLLDGCDLLLVA 392
IT+R PK N EL + + + VL R V A L+DGC L+VA
Sbjct: 78 ITIRTAIPKTNPELVEAR------RRGIPVLLRSAVLARLMDGCTTLMVA 121
>sp|Q44774|FTSA_BORBU Cell division protein ftsA
Length = 413
Score = 31.6 bits (70), Expect = 2.3
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +3
Query: 321 SVDVLARELVEADLLDGCDLLLVAHNLSELVAEPTMRERVFALNSPPASGVINEAD---- 488
++D ++ + A+L+ GCD+ ++ ++S E T V A+NS INE D
Sbjct: 53 ALDSISNSIEAAELISGCDITSLSVSMSGSSVEGTNSRGVVAINSKTRE--INEEDVERV 110
Query: 489 LNGYAKVLLRFAHEDLPVLPKT*FTD 566
+ +++ E L V+P+ D
Sbjct: 111 IEAAKAIVIPMDREILHVIPQEFIVD 136
>sp|Q01222|VB18_VACCV Ankyrin repeat protein B18
Length = 574
Score = 30.0 bits (66), Expect = 6.7
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 465 SGVINEADLNGYAKVLLRFAHED--LPVLPKT*FTDKNCLFSCLAFEISYLMKY 620
S ++NE LN Y K + D PV FTDKNCL + L EI Y + Y
Sbjct: 509 SNIMNERYLNVYYKDMYVSKVYDKLFPV-----FTDKNCLLTLLPSEIIYEILY 557
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,669,173
Number of Sequences: 369166
Number of extensions: 1292873
Number of successful extensions: 3299
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3298
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6631293200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)