Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_017_D13
(585 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P80895|PIMT_PIG Protein-L-isoaspartate(D-aspartate) O-me... 131 1e-30
sp|Q92047|PIMT_BRARE Protein-L-isoaspartate(D-aspartate) O-... 130 2e-30
sp|P15246|PIMT_BOVIN Protein-L-isoaspartate(D-aspartate) O-... 129 5e-30
sp|P22061|PIMT_HUMAN Protein-L-isoaspartate(D-aspartate) O-... 128 9e-30
sp|P22062|PIMT_RAT Protein-L-isoaspartate(D-aspartate) O-me... 128 1e-29
sp|P23506|PIMT_MOUSE Protein-L-isoaspartate(D-aspartate) O-... 127 3e-29
sp|Q43209|PIMT_WHEAT Protein-L-isoaspartate O-methyltransfe... 123 4e-28
sp|Q42539|PIMT_ARATH Protein-L-isoaspartate O-methyltransfe... 117 2e-26
sp|Q27869|PIMT_DROME Protein-L-isoaspartate(D-aspartate) O-... 108 1e-23
sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransfe... 86 9e-17
>sp|P80895|PIMT_PIG Protein-L-isoaspartate(D-aspartate) O-methyltransferase
(Protein-beta-aspartate methyltransferase) (PIMT)
(Protein L-isoaspartyl/D-aspartyl methyltransferase)
(L-isoaspartyl protein carboxyl methyltransferase)
Length = 227
Score = 131 bits (330), Expect = 1e-30
Identities = 70/125 (56%), Positives = 83/125 (66%)
Frame = +1
Query: 130 VHPDGKAIGVDHVNDLVKTSIDNCKKSPEISSLLESKALQFHATDGRNGFPEHAPYDAIH 309
V P GK IG+DH+ +LV SI+N +K + LL S +Q DGR G+ E APYDAIH
Sbjct: 100 VGPSGKVIGIDHIKELVDDSINNVRKDDPM--LLSSGRVQLVVGDGRMGYAEEAPYDAIH 157
Query: 310 VGAAADKIPDKLIEQLKVGGRFICPVGADGYNQSLVQIDKKSDGSFERKEMMGVRYVPLT 489
VGAAA +P LI+QLK GGR I PVG G NQ L Q DK DGS + K +MGV YVPLT
Sbjct: 158 VGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLT 217
Query: 490 DLKKQ 504
D +KQ
Sbjct: 218 DKEKQ 222
>sp|Q92047|PIMT_BRARE Protein-L-isoaspartate(D-aspartate) O-methyltransferase
(Protein-beta-aspartate methyltransferase) (PIMT)
(Protein L-isoaspartyl/D-aspartyl methyltransferase)
(L-isoaspartyl protein carboxyl methyltransferase)
Length = 228
Score = 130 bits (327), Expect = 2e-30
Identities = 70/125 (56%), Positives = 82/125 (65%)
Frame = +1
Query: 130 VHPDGKAIGVDHVNDLVKTSIDNCKKSPEISSLLESKALQFHATDGRNGFPEHAPYDAIH 309
V P GK IG+DH+ +LV+ SI N KK SL+ S ++ DGR GF E APYDAIH
Sbjct: 100 VGPTGKVIGIDHIKELVEDSIANVKKDDP--SLITSGRIKLIVGDGRMGFTEEAPYDAIH 157
Query: 310 VGAAADKIPDKLIEQLKVGGRFICPVGADGYNQSLVQIDKKSDGSFERKEMMGVRYVPLT 489
VGAAA +P L++QLK GGR I PVG G NQ L Q DK DGS + K +MGV YVPLT
Sbjct: 158 VGAAAPTVPQALLDQLKPGGRLILPVGPAGGNQMLEQYDKLEDGSTKMKPLMGVIYVPLT 217
Query: 490 DLKKQ 504
D KQ
Sbjct: 218 DKDKQ 222
>sp|P15246|PIMT_BOVIN Protein-L-isoaspartate(D-aspartate) O-methyltransferase
(Protein-beta-aspartate methyltransferase) (PIMT)
(Protein L-isoaspartyl/D-aspartyl methyltransferase)
(L-isoaspartyl protein carboxyl methyltransferase)
Length = 226
Score = 129 bits (324), Expect = 5e-30
Identities = 69/125 (55%), Positives = 82/125 (65%)
Frame = +1
Query: 130 VHPDGKAIGVDHVNDLVKTSIDNCKKSPEISSLLESKALQFHATDGRNGFPEHAPYDAIH 309
V P GK IG+DH+ +LV SI+N +K + LL S +Q DGR G+ APYDAIH
Sbjct: 99 VGPSGKVIGIDHIKELVDDSINNVRKDDPM--LLSSGRVQLVVGDGRMGYAAEAPYDAIH 156
Query: 310 VGAAADKIPDKLIEQLKVGGRFICPVGADGYNQSLVQIDKKSDGSFERKEMMGVRYVPLT 489
VGAAA +P LI+QLK GGR I PVG G NQ L Q DK DGS + K +MGV YVPLT
Sbjct: 157 VGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLT 216
Query: 490 DLKKQ 504
D +KQ
Sbjct: 217 DKEKQ 221
>sp|P22061|PIMT_HUMAN Protein-L-isoaspartate(D-aspartate) O-methyltransferase
(Protein-beta-aspartate methyltransferase) (PIMT)
(Protein L-isoaspartyl/D-aspartyl methyltransferase)
(L-isoaspartyl protein carboxyl methyltransferase)
Length = 227
Score = 128 bits (322), Expect = 9e-30
Identities = 68/121 (56%), Positives = 81/121 (66%)
Frame = +1
Query: 142 GKAIGVDHVNDLVKTSIDNCKKSPEISSLLESKALQFHATDGRNGFPEHAPYDAIHVGAA 321
GK IG+DH+ +LV SI+N +K +LL S +Q DGR G+ E APYDAIHVGAA
Sbjct: 104 GKVIGIDHIKELVDDSINNVRKDDP--TLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAA 161
Query: 322 ADKIPDKLIEQLKVGGRFICPVGADGYNQSLVQIDKKSDGSFERKEMMGVRYVPLTDLKK 501
A +P LI+QLK GGR I PVG G NQ L Q DK DGS + K +MGV YVPLTD +K
Sbjct: 162 APVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVIYVPLTDKEK 221
Query: 502 Q 504
Q
Sbjct: 222 Q 222
>sp|P22062|PIMT_RAT Protein-L-isoaspartate(D-aspartate) O-methyltransferase
(Protein-beta-aspartate methyltransferase) (PIMT)
(Protein L-isoaspartyl/D-aspartyl methyltransferase)
(L-isoaspartyl protein carboxyl methyltransferase)
Length = 227
Score = 128 bits (321), Expect = 1e-29
Identities = 69/121 (57%), Positives = 80/121 (66%)
Frame = +1
Query: 142 GKAIGVDHVNDLVKTSIDNCKKSPEISSLLESKALQFHATDGRNGFPEHAPYDAIHVGAA 321
GK IG+DH+ +LV SI N KK + LL S ++ DGR GF E APYDAIHVGAA
Sbjct: 104 GKVIGIDHIKELVDDSITNVKKDDPM--LLSSGRVRLVVGDGRMGFAEEAPYDAIHVGAA 161
Query: 322 ADKIPDKLIEQLKVGGRFICPVGADGYNQSLVQIDKKSDGSFERKEMMGVRYVPLTDLKK 501
A +P LI+QLK GGR I PVG G NQ L Q DK DGS + K +MGV YVPLTD +K
Sbjct: 162 APVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEK 221
Query: 502 Q 504
Q
Sbjct: 222 Q 222
>sp|P23506|PIMT_MOUSE Protein-L-isoaspartate(D-aspartate) O-methyltransferase
(Protein-beta-aspartate methyltransferase) (PIMT)
(Protein L-isoaspartyl/D-aspartyl methyltransferase)
(L-isoaspartyl protein carboxyl methyltransferase)
Length = 227
Score = 127 bits (318), Expect = 3e-29
Identities = 68/121 (56%), Positives = 80/121 (66%)
Frame = +1
Query: 142 GKAIGVDHVNDLVKTSIDNCKKSPEISSLLESKALQFHATDGRNGFPEHAPYDAIHVGAA 321
GK IG+DH+ +LV SI N KK + LL S ++ DGR G+ E APYDAIHVGAA
Sbjct: 104 GKVIGIDHIKELVDDSITNVKKDDPM--LLSSGRVRLVVGDGRMGYAEEAPYDAIHVGAA 161
Query: 322 ADKIPDKLIEQLKVGGRFICPVGADGYNQSLVQIDKKSDGSFERKEMMGVRYVPLTDLKK 501
A +P LI+QLK GGR I PVG G NQ L Q DK DGS + K +MGV YVPLTD +K
Sbjct: 162 APVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEK 221
Query: 502 Q 504
Q
Sbjct: 222 Q 222
>sp|Q43209|PIMT_WHEAT Protein-L-isoaspartate O-methyltransferase (Protein-beta-aspartate
methyltransferase) (PIMT) (Protein L-isoaspartyl
methyltransferase) (L-isoaspartyl protein carboxyl
methyltransferase)
Length = 230
Score = 123 bits (308), Expect = 4e-28
Identities = 63/126 (50%), Positives = 87/126 (69%)
Frame = +1
Query: 130 VHPDGKAIGVDHVNDLVKTSIDNCKKSPEISSLLESKALQFHATDGRNGFPEHAPYDAIH 309
V P+G+A+G++H+ +LV S +N ++S ++L++ +L FH +DGR G+P+ APYDAIH
Sbjct: 105 VGPEGRAVGIEHIPELVVASTENVERSAA-AALMKDGSLSFHVSDGRLGWPDAAPYDAIH 163
Query: 310 VGAAADKIPDKLIEQLKVGGRFICPVGADGYNQSLVQIDKKSDGSFERKEMMGVRYVPLT 489
VGAAA +IP L+EQLK GGR + PVG Y+Q L IDK +DGS + VRYVPLT
Sbjct: 164 VGAAAPEIPRPLLEQLKPGGRMVIPVGT--YSQDLQVIDKSADGSTSVRNDASVRYVPLT 221
Query: 490 DLKKQL 507
QL
Sbjct: 222 SRSAQL 227
>sp|Q42539|PIMT_ARATH Protein-L-isoaspartate O-methyltransferase (Protein-beta-aspartate
methyltransferase) (PIMT) (Protein L-isoaspartyl
methyltransferase) (L-isoaspartyl protein carboxyl
methyltransferase)
Length = 230
Score = 117 bits (294), Expect = 2e-26
Identities = 64/126 (50%), Positives = 83/126 (65%)
Frame = +1
Query: 130 VHPDGKAIGVDHVNDLVKTSIDNCKKSPEISSLLESKALQFHATDGRNGFPEHAPYDAIH 309
V +G+AIGV+H+ +LV +S+ N + S S L+ ++L H DGR G+ E APYDAIH
Sbjct: 105 VGTEGRAIGVEHIPELVASSVKNIEASAA-SPFLKERSLAVHVGDGRQGWAEFAPYDAIH 163
Query: 310 VGAAADKIPDKLIEQLKVGGRFICPVGADGYNQSLVQIDKKSDGSFERKEMMGVRYVPLT 489
VGAAA +IP+ LI+QLK GGR + PVG Q L +DK SDGS K+ VRYVPLT
Sbjct: 164 VGAAAPEIPEALIDQLKPGGRLVIPVG--NIFQDLQVVDKNSDGSVSIKDETSVRYVPLT 221
Query: 490 DLKKQL 507
+ QL
Sbjct: 222 SREAQL 227
>sp|Q27869|PIMT_DROME Protein-L-isoaspartate(D-aspartate) O-methyltransferase
(Protein-beta-aspartate methyltransferase) (PIMT)
(dPIMT) (Protein L-isoaspartyl/D-aspartyl
methyltransferase) (L-isoaspartyl protein carboxyl
methyltransferase)
Length = 226
Score = 108 bits (270), Expect = 1e-23
Identities = 58/123 (47%), Positives = 76/123 (61%)
Frame = +1
Query: 130 VHPDGKAIGVDHVNDLVKTSIDNCKKSPEISSLLESKALQFHATDGRNGFPEHAPYDAIH 309
V D + +G++H +LV+ S N S+L+S L DGR G+P +APY+AIH
Sbjct: 105 VDADTRIVGIEHQAELVRRSKANLNTDDR--SMLDSGQLLIVEGDGRKGYPPNAPYNAIH 162
Query: 310 VGAAADKIPDKLIEQLKVGGRFICPVGADGYNQSLVQIDKKSDGSFERKEMMGVRYVPLT 489
VGAAA P +LI QL GGR I PVG DG +Q + Q DK ++G E +MGV YVPLT
Sbjct: 163 VGAAAPDTPTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLT 222
Query: 490 DLK 498
DL+
Sbjct: 223 DLR 225
>sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransferase (Protein-beta-aspartate
methyltransferase) (PIMT) (Protein L-isoaspartyl
methyltransferase) (L-isoaspartyl protein carboxyl
methyltransferase)
Length = 225
Score = 85.5 bits (210), Expect = 9e-17
Identities = 52/122 (42%), Positives = 71/122 (58%)
Frame = +1
Query: 139 DGKAIGVDHVNDLVKTSIDNCKKSPEISSLLESKALQFHATDGRNGFPEHAPYDAIHVGA 318
+G +G++H+ LV+ S N +K S LE + DGR GF E APY+AIHVGA
Sbjct: 103 NGTVVGIEHMPQLVELSEKNIRKHH--SEQLERGNVIIIEGDGRQGFAEKAPYNAIHVGA 160
Query: 319 AADKIPDKLIEQLKVGGRFICPVGADGYNQSLVQIDKKSDGSFERKEMMGVRYVPLTDLK 498
A+ +P L +QL GGR + PV NQ +QID K +G E+K + V YVPLT +
Sbjct: 161 ASKGVPKALTDQLAEGGRMMIPVEQVDGNQVFMQID-KINGKIEQKIVEHVIYVPLTSRE 219
Query: 499 KQ 504
+Q
Sbjct: 220 EQ 221
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,098,484
Number of Sequences: 369166
Number of extensions: 1311491
Number of successful extensions: 3504
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3476
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4357244645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)