Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_017_D10
(810 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q4R4R7|PRPS2_MACFA Ribose-phosphate pyrophosphokinase II... 277 2e-74
sp|P09330|PRPS2_RAT Ribose-phosphate pyrophosphokinase II (... 277 2e-74
sp|Q9CS42|PRPS2_MOUSE Ribose-phosphate pyrophosphokinase II... 277 3e-74
sp|P60891|PRPS1_HUMAN Ribose-phosphate pyrophosphokinase I ... 276 4e-74
sp|Q9D7G0|PRPS1_MOUSE Ribose-phosphate pyrophosphokinase I ... 276 5e-74
sp|P21108|PRPS3_HUMAN Ribose-phosphate pyrophosphokinase II... 269 6e-72
sp|P38689|KPR3_YEAST Ribose-phosphate pyrophosphokinase 3 (... 229 9e-60
sp|P38620|KPR2_YEAST Ribose-phosphate pyrophosphokinase 2 (... 222 1e-57
sp|P46585|KPR1_CANAL Ribose-phosphate pyrophosphokinase 1 (... 221 1e-57
sp|P38063|KPR4_YEAST Probable ribose-phosphate pyrophosphok... 220 3e-57
>sp|Q4R4R7|PRPS2_MACFA Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II)
sp|P11908|PRPS2_HUMAN Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II) (PPRibP)
Length = 318
Score = 277 bits (709), Expect = 2e-74
Identities = 137/271 (50%), Positives = 198/271 (73%), Gaps = 2/271 (0%)
Frame = +2
Query: 2 ERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYIDVNNRLMELLIMINACKNA 181
+R+G++L + + KFSN ETSV+I ESVRG+DV+I+QSG ++N+ LMELLIMINACK A
Sbjct: 21 DRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIA 80
Query: 182 SSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHIITMDLHASQIQGFFNV 361
SS+R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+HIITMDLHASQIQGFF++
Sbjct: 81 SSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDI 140
Query: 362 PVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTLKVRFGLIYVEKKEAS 541
PVDNL +E + WI++NI++W+ I S + A+RV ++A+ L V F LI+ E+K+A+
Sbjct: 141 PVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKAN 200
Query: 542 E--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVYVIATHGMLSERLMKE 715
E +++LVGDV R+A+++ D+ D C + + +L GA VY I THG+ S +
Sbjct: 201 EVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISR 260
Query: 716 VDDSIITKLVVTNTICQEKYVKQSDKIACLD 808
++++ +VVTNTI QE +K KI +D
Sbjct: 261 INNAAFEAVVVTNTIPQEDKMKHCTKIQVID 291
>sp|P09330|PRPS2_RAT Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II)
Length = 318
Score = 277 bits (709), Expect = 2e-74
Identities = 137/271 (50%), Positives = 197/271 (72%), Gaps = 2/271 (0%)
Frame = +2
Query: 2 ERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYIDVNNRLMELLIMINACKNA 181
+R+G++L + + KFSN ETSV+I ESVRG+DV+I+QSG ++N+ LMELLIMINACK A
Sbjct: 21 DRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIA 80
Query: 182 SSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHIITMDLHASQIQGFFNV 361
SS+R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+HIITMDLHASQIQGFF++
Sbjct: 81 SSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDI 140
Query: 362 PVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTLKVRFGLIYVEKKEAS 541
PVDNL +E + WI++NI++W I S + A+RV ++A+ L V F LI+ E+K+A+
Sbjct: 141 PVDNLYAEPAVLQWIRENITEWRNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKAN 200
Query: 542 E--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVYVIATHGMLSERLMKE 715
E +++LVGDV R+A+++ D+ D C + + +L GA VY I THG+ S +
Sbjct: 201 EVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISR 260
Query: 716 VDDSIITKLVVTNTICQEKYVKQSDKIACLD 808
++++ +VVTNTI QE +K KI +D
Sbjct: 261 INNAAFEAVVVTNTIPQEDKMKHCSKIQVID 291
>sp|Q9CS42|PRPS2_MOUSE Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II)
Length = 318
Score = 277 bits (708), Expect = 3e-74
Identities = 137/271 (50%), Positives = 196/271 (72%), Gaps = 2/271 (0%)
Frame = +2
Query: 2 ERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYIDVNNRLMELLIMINACKNA 181
+R+G++L + + KFSN ETSV+I ESVRG+DV+I+QSG ++N+ LMELLIMINACK A
Sbjct: 21 DRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIA 80
Query: 182 SSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHIITMDLHASQIQGFFNV 361
SS+R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+HIITMDLHASQIQGFF++
Sbjct: 81 SSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDI 140
Query: 362 PVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTLKVRFGLIYVEKKEAS 541
PVDNL +E + WI++NI++W I S + A+RV ++A+ L V F LI+ E+K+A+
Sbjct: 141 PVDNLYAEPAVLQWIRENITEWRNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKAN 200
Query: 542 E--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVYVIATHGMLSERLMKE 715
E +++LVGDV R+A+++ D+ D C + + +L GA VY I THG+ S +
Sbjct: 201 EVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISR 260
Query: 716 VDDSIITKLVVTNTICQEKYVKQSDKIACLD 808
++ + +VVTNTI QE +K KI +D
Sbjct: 261 INSAAFEAVVVTNTIPQEDKMKHCSKIQVID 291
>sp|P60891|PRPS1_HUMAN Ribose-phosphate pyrophosphokinase I (Phosphoribosyl pyrophosphate
synthetase I) (PRS-I) (PPRibP)
sp|P60892|PRPS1_RAT Ribose-phosphate pyrophosphokinase I (Phosphoribosyl pyrophosphate
synthetase I) (PRS-I)
Length = 318
Score = 276 bits (707), Expect = 4e-74
Identities = 137/271 (50%), Positives = 197/271 (72%), Gaps = 2/271 (0%)
Frame = +2
Query: 2 ERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYIDVNNRLMELLIMINACKNA 181
+R+G++L + + KFSN ET V+I ESVRG+DV+I+QSG ++N+ LMELLIMINACK A
Sbjct: 21 DRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIA 80
Query: 182 SSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHIITMDLHASQIQGFFNV 361
S++R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+HIITMDLHASQIQGFF++
Sbjct: 81 SASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDI 140
Query: 362 PVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTLKVRFGLIYVEKKEAS 541
PVDNL +E + WI++NIS+W TI S + A+RV ++A+ L V F LI+ E+K+A+
Sbjct: 141 PVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKAN 200
Query: 542 E--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVYVIATHGMLSERLMKE 715
E +++LVGDV R+A+++ D+ D C + + +L GA VY I THG+ S +
Sbjct: 201 EVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISR 260
Query: 716 VDDSIITKLVVTNTICQEKYVKQSDKIACLD 808
++++ +VVTNTI QE +K KI +D
Sbjct: 261 INNACFEAVVVTNTIPQEDKMKHCSKIQVID 291
>sp|Q9D7G0|PRPS1_MOUSE Ribose-phosphate pyrophosphokinase I (Phosphoribosyl pyrophosphate
synthetase I) (PRS-I)
Length = 318
Score = 276 bits (706), Expect = 5e-74
Identities = 137/271 (50%), Positives = 196/271 (72%), Gaps = 2/271 (0%)
Frame = +2
Query: 2 ERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYIDVNNRLMELLIMINACKNA 181
+R+G++L + + KFSN ET V+I ESVRG+DV+I+QSG ++N+ LMELLIMINACK A
Sbjct: 21 DRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIA 80
Query: 182 SSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHIITMDLHASQIQGFFNV 361
S++R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+HIITMDLHASQIQGFF++
Sbjct: 81 SASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDI 140
Query: 362 PVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTLKVRFGLIYVEKKEAS 541
PVDNL +E + WI++NIS+W TI S + A+RV ++A L V F LI+ E+K+A+
Sbjct: 141 PVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIAERLNVDFALIHKERKKAN 200
Query: 542 E--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVYVIATHGMLSERLMKE 715
E +++LVGDV R+A+++ D+ D C + + +L GA VY I THG+ S +
Sbjct: 201 EVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISR 260
Query: 716 VDDSIITKLVVTNTICQEKYVKQSDKIACLD 808
++++ +VVTNTI QE +K KI +D
Sbjct: 261 INNACFEAVVVTNTIPQEDKMKHCSKIQVID 291
>sp|P21108|PRPS3_HUMAN Ribose-phosphate pyrophosphokinase III (Phosphoribosyl
pyrophosphate synthetase III) (PRS-III) (Phosphoribosyl
pyrophosphate synthetase 1-like 1)
Length = 318
Score = 269 bits (688), Expect = 6e-72
Identities = 136/271 (50%), Positives = 195/271 (71%), Gaps = 2/271 (0%)
Frame = +2
Query: 2 ERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYIDVNNRLMELLIMINACKNA 181
+R+G++L + + KFSN ET V+I ESVRG+DV+I+QSG ++N+ LMELLIMINACK A
Sbjct: 21 DRLGLELGKVVTKKFSNQETCVEIDESVRGEDVYIVQSGCGEINDSLMELLIMINACKIA 80
Query: 182 SSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHIITMDLHASQIQGFFNV 361
S++R+TAV+P PY+RQ KKD +R PI+AKLVA++L IAGA+HIITMDLHASQIQGFF++
Sbjct: 81 SASRVTAVIPCFPYARQDKKDKSRSPISAKLVANMLSIAGADHIITMDLHASQIQGFFDI 140
Query: 362 PVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTLKVRFGLIYVEKKEAS 541
PVDNL +E + WI++NI +W+ I S + A+RV ++A+ L V F LI+ E+K+A+
Sbjct: 141 PVDNLYAEPTVLKWIRENIPEWKNCIIVSPDAGGAKRVTSIADQLNVDFALIHKERKKAN 200
Query: 542 EQ--IILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVYVIATHGMLSERLMKE 715
E I+LVGDV R+A+++ D+ D C + + +L GA VY I THG+ S +
Sbjct: 201 EVDCIVLVGDVNDRVAILVDDMADTCVTICLAADKLLSAGATRVYAILTHGIFSGPAISR 260
Query: 716 VDDSIITKLVVTNTICQEKYVKQSDKIACLD 808
++ + +VVTNTI Q++ +K KI +D
Sbjct: 261 INTACFEAVVVTNTIPQDEKMKHCSKIRVID 291
>sp|P38689|KPR3_YEAST Ribose-phosphate pyrophosphokinase 3 (Phosphoribosyl pyrophosphate
synthetase 3)
Length = 320
Score = 229 bits (583), Expect = 9e-60
Identities = 123/272 (45%), Positives = 187/272 (68%), Gaps = 3/272 (1%)
Frame = +2
Query: 2 ERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFIL-QSGYIDVNNRLMELLIMINACKN 178
+R+G++L+ + L + E S I ESVR +D+FI+ Q G VN+R++ELLIMINA K
Sbjct: 23 KRLGLQLTSSKLKRDPTGEVSFSIGESVRDQDIFIITQIGSGVVNDRVLELLIMINASKT 82
Query: 179 ASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHIITMDLHASQIQGFFN 358
AS+ RITA++P PY+RQ +KD +R PITAKL+AD+L AG +H+ITMDLHASQIQGFF+
Sbjct: 83 ASARRITAIIPNFPYARQDRKDKSRAPITAKLMADMLTTAGCDHVITMDLHASQIQGFFD 142
Query: 359 VPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTLKVRFGLIYVEKKEA 538
VPVDNL +E + +IK+N++ + I I S + A+R A +A+ L + F LI+ E+ A
Sbjct: 143 VPVDNLYAEPSVVRYIKENVNYMDSI-IISPDAGGAKRAATLADRLDLNFALIHKERARA 201
Query: 539 SE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVYVIATHGMLSERLMK 712
+E +++LVGDV +I +I+ D+ D C + + + L E A V I THG+LS R ++
Sbjct: 202 NEVSRMVLVGDVTDKICIIVDDMADTCGTLAKAAEILLENRAKSVIAIVTHGVLSGRAIE 261
Query: 713 EVDDSIITKLVVTNTICQEKYVKQSDKIACLD 808
+++S + ++V TNT+ E+ +K+ K+A +D
Sbjct: 262 NINNSKLDRVVCTNTVPFEEKIKKCPKLAVID 293
>sp|P38620|KPR2_YEAST Ribose-phosphate pyrophosphokinase 2 (Phosphoribosyl pyrophosphate
synthetase 2)
Length = 318
Score = 222 bits (565), Expect = 1e-57
Identities = 115/257 (44%), Positives = 181/257 (70%), Gaps = 4/257 (1%)
Frame = +2
Query: 2 ERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGY--IDVNNRLMELLIMINACK 175
+R+G+ LS+ + ++SN ETSV I ES+R +DV+I+Q+GY ++N+ LMELLI+I+ACK
Sbjct: 23 QRLGVPLSKVGVYQYSNKETSVTIGESIRDEDVYIIQTGYGEHEINDFLMELLILIHACK 82
Query: 176 NASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHIITMDLHASQIQGFF 355
AS RITAV+P PY+RQ KKD +R PITAKL+A+LL AG +H+ITMDLHASQIQGFF
Sbjct: 83 TASVRRITAVIPNFPYARQDKKDKSRAPITAKLIANLLETAGCDHVITMDLHASQIQGFF 142
Query: 356 NVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTLKVRFGLIYVEKKE 535
++PVDNL E +++I+ + + + S + A+RVA++A+ L + F LI+ E+++
Sbjct: 143 HIPVDNLYGEPSVLNYIRTK-TDFNNAILVSPDAGGAKRVASLADKLDMNFALIHKERQK 201
Query: 536 ASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVYVIATHGMLSERLM 709
A+E +++LVGDV + +++ D+ D C ++ + L + GA V I THG+ S
Sbjct: 202 ANEVSRMLLVGDVAGKSCLLIDDMADTCGTLVKACDTLMDHGAKEVIAIVTHGIFSGSAR 261
Query: 710 KEVDDSIITKLVVTNTI 760
+++ +S ++++V TNT+
Sbjct: 262 EKLINSRLSRIVCTNTV 278
>sp|P46585|KPR1_CANAL Ribose-phosphate pyrophosphokinase 1 (Phosphoribosyl pyrophosphate
synthetase 1)
Length = 321
Score = 221 bits (564), Expect = 1e-57
Identities = 122/272 (44%), Positives = 180/272 (66%), Gaps = 3/272 (1%)
Frame = +2
Query: 2 ERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFIL-QSGYIDVNNRLMELLIMINACKN 178
+R+G++L+ + L + S E I ESVR +D+FI+ Q G +VN+R+ EL+IMINACK
Sbjct: 23 KRLGLRLTPSELKRESTGEVQFSIGESVRDEDIFIICQIGSGEVNDRVFELMIMINACKT 82
Query: 179 ASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHIITMDLHASQIQGFFN 358
AS+ RIT +LP PY+RQ +KD +R PITAKL+AD+L AG +H+ITMDLHASQIQGFF+
Sbjct: 83 ASARRITVILPNFPYARQDRKDKSRAPITAKLMADMLTTAGCDHVITMDLHASQIQGFFD 142
Query: 359 VPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTLKVRFGLIYVEKKEA 538
VPVDNL +E + +IK+ I + E I S + A+R A +A+ L + F LI+ E+ A
Sbjct: 143 VPVDNLYAEPSVVRYIKETID-YSEAIIISSDAGGAKRAAGLADRLDLNFELIHKERARA 201
Query: 539 SE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVYVIATHGMLSERLMK 712
+E +++LV DV +I VI+ D+ D C + + + L + A V I THG+LS +K
Sbjct: 202 NEVSRMVLVVDVTDKICVIVDDMADTCGTLAKAAEVLLDNNAKDVIAIVTHGILSGNAIK 261
Query: 713 EVDDSIITKLVVTNTICQEKYVKQSDKIACLD 808
+++S + K+V TNT+ E +K K+ +D
Sbjct: 262 NINNSKLKKVVCTNTVPFEDKLKLCLKLDTID 293
>sp|P38063|KPR4_YEAST Probable ribose-phosphate pyrophosphokinase 4 (Phosphoribosyl
pyrophosphate synthetase 4)
Length = 355
Score = 220 bits (561), Expect = 3e-57
Identities = 116/269 (43%), Positives = 189/269 (70%), Gaps = 4/269 (1%)
Frame = +2
Query: 2 ERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGY--IDVNNRLMELLIMINACK 175
+++GI LS+ + ++SN ETSV I ES+R +DV+I+Q+G ++N+ LMELLI+I+AC+
Sbjct: 59 KKLGIPLSKVGVYQYSNKETSVTIGESLRDEDVYIIQTGIGEQEINDFLMELLILIHACQ 118
Query: 176 NASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHIITMDLHASQIQGFF 355
AS+ +IT V+P PY+RQ KKD +R PITAKLVA+LL AGA+H+ITMDLHASQIQGFF
Sbjct: 119 IASARKITTVIPNFPYARQDKKDKSRAPITAKLVANLLQTAGADHVITMDLHASQIQGFF 178
Query: 356 NVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTLKVRFGLIYVEKKE 535
++PVDNL +E +++I+ + ++ + S + A+RVA +A+ L + F LI+ E+++
Sbjct: 179 HIPVDNLYAEPSVLNYIRARKTDFDNAILVSPDAGGAKRVAALADKLDLNFALIHKERQK 238
Query: 536 ASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVYVIATHGMLSERLM 709
A+E +++LVGDV ++ +++ D+ D C ++ + L E GA V I THG+ S
Sbjct: 239 ANEVSKMVLVGDVTNKSCLLVDDMADTCGTLVKACDTLMEHGAKEVIAIVTHGIFSGSAR 298
Query: 710 KEVDDSIITKLVVTNTICQEKYVKQSDKI 796
+++ +S ++++V TNT+ + + +D+I
Sbjct: 299 EKLRNSRLSRIVCTNTVPVDLDLPIADQI 327
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,985,668
Number of Sequences: 369166
Number of extensions: 1853736
Number of successful extensions: 4972
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4801
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7715018400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)