Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_017_D06
(879 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 301 2e-81
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 298 1e-80
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 295 9e-80
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 294 3e-79
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 293 6e-79
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 284 2e-76
sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precu... 284 2e-76
sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine protei... 283 4e-76
sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted pr... 282 8e-76
sp|P25784|CYSP3_HOMAM Digestive cysteine proteinase 3 precu... 282 8e-76
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 301 bits (771), Expect = 2e-81
Identities = 149/273 (54%), Positives = 182/273 (66%), Gaps = 5/273 (1%)
Frame = +1
Query: 7 GEYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWR 186
GEY GKH +++ +N F DMTNEEF+ + +G + + +G + P + LP SVDWR
Sbjct: 64 GEYSQGKHGFTMAMNAFGDMTNEEFR-QMMGCFRNQKFRKGKVFREPLFLD-LPKSVDWR 121
Query: 187 QKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXX 366
+KGYVTPVKNQ+QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS
Sbjct: 122 KKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGG 181
Query: 367 LMDNAFRYIKDQ-GIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVA 543
M AF+Y+K+ G++SE YPY A D CK P V TGFT + E L AVA
Sbjct: 182 FMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVA 241
Query: 544 TVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYG----TQIGKKYWIVKN 711
TVGP+SVA+DAGH+SFQ YKSGIY E CS+ LDHGVL VGYG KYW+VKN
Sbjct: 242 TVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKN 301
Query: 712 SWDVTWGESGYIKMSKDKKNQCGIATMASYPLV 810
SW WG +GY+K++KDK N CGIAT ASYP V
Sbjct: 302 SWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 298 bits (763), Expect = 1e-80
Identities = 152/272 (55%), Positives = 181/272 (66%), Gaps = 5/272 (1%)
Frame = +1
Query: 10 EYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQ 189
EY GKH++++ +N F DMT+EEF+ G KP +G + P P SVDWR+
Sbjct: 65 EYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR-KGKVFQEPLFYEA-PRSVDWRE 122
Query: 190 KGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXL 369
KGYVTPVKNQ QCGSCW+FSATG+LEGQ FRK RLIS SEQ LVDCS L
Sbjct: 123 KGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGL 182
Query: 370 MDNAFRYIKDQ-GIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVAT 546
MD AF+Y++D G++SE YPY AT+ +CK NP V TGF DI Q E L AVAT
Sbjct: 183 MDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQ-EKALMKAVAT 241
Query: 547 VGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGTQI----GKKYWIVKNS 714
VGP+SVAIDAGH SF YK GIY E CS+ +DHGVL VGYG + KYW+VKNS
Sbjct: 242 VGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNS 301
Query: 715 WDVTWGESGYIKMSKDKKNQCGIATMASYPLV 810
W WG GY+KM+KD++N CGIA+ ASYP V
Sbjct: 302 WGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 295 bits (756), Expect = 9e-80
Identities = 152/272 (55%), Positives = 178/272 (65%), Gaps = 5/272 (1%)
Frame = +1
Query: 10 EYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQ 189
EY GKH +++ +N F DMTNEEF+ G K +G + P +P SVDWR+
Sbjct: 65 EYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHK-KGKMFQEPL-FAEIPKSVDWRE 122
Query: 190 KGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXL 369
KGYVTPVKNQ QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS L
Sbjct: 123 KGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGL 182
Query: 370 MDNAFRYIKDQ-GIESEGDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVA 543
MDNAFRY+KD G++SE YPY D TC P TGF D+ Q E L AVA
Sbjct: 183 MDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDL-PQREKALMKAVA 241
Query: 544 TVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGY---GTQIGKKYWIVKNS 714
T+GP+SVAIDAGH SFQ YKSGIY + CS+ LDHGVL VGY GT K+WIVKNS
Sbjct: 242 TLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNS 301
Query: 715 WDVTWGESGYIKMSKDKKNQCGIATMASYPLV 810
W WG +GY+KM+KD+ N CGIAT ASYP V
Sbjct: 302 WGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 333
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 294 bits (752), Expect = 3e-79
Identities = 154/273 (56%), Positives = 178/273 (65%), Gaps = 6/273 (2%)
Frame = +1
Query: 10 EYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQ 189
EY GKH + + +N F DMTNEEF+ G K +G + P + V P SVDW +
Sbjct: 65 EYSEGKHAFRMAMNAFGDMTNEEFRQVMNGFQNQKHK-KGKLFHEPLLVDV-PKSVDWTK 122
Query: 190 KGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXL 369
KGYVTPVKNQ QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS L
Sbjct: 123 KGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGL 182
Query: 370 MDNAFRYIKDQ-GIESEGDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVA 543
MDNAF+YIKD G++SE YPY ATD +C P TGF DI Q E L AVA
Sbjct: 183 MDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDI-PQREKALMKAVA 241
Query: 544 TVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGTQ----IGKKYWIVKN 711
TVGP+SVAIDAGH SFQ YKSGIY + CS LDHGVL VGYG + K+WIVKN
Sbjct: 242 TVGPISVAIDAGHTSFQFYKSGIYYDPDCSCKDLDHGVLVVGYGFEGTDSNNNKFWIVKN 301
Query: 712 SWDVTWGESGYIKMSKDKKNQCGIATMASYPLV 810
SW WG +GY+KM+KD+ N CGIAT ASYP V
Sbjct: 302 SWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 293 bits (749), Expect = 6e-79
Identities = 149/272 (54%), Positives = 182/272 (66%), Gaps = 9/272 (3%)
Frame = +1
Query: 22 GKHTYSLGLNQFADMTNEEFKAKYLG-------IMKTKPTLEGSTYMAPENIGVLPASVD 180
GK +Y LGLN++ADM + EFK G +M+ + L G+TY+ P ++ V P SVD
Sbjct: 69 GKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTV-PKSVD 127
Query: 181 WRQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXX 360
WR+ G VT VK+Q CGSCW+FS+TG+LEGQ+FRK L+S SEQ LVDCS
Sbjct: 128 WREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCN 187
Query: 361 XXLMDNAFRYIKDQG-IESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANA 537
LMDNAFRYIKD G I++E YPY D +C N + I TGF DI +E + A
Sbjct: 188 GGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKA 247
Query: 538 VATVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGT-QIGKKYWIVKNS 714
VAT+GPVSVAIDA H SFQLY G+YNE C LDHGVL VGYGT + G YW+VKNS
Sbjct: 248 VATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNS 307
Query: 715 WDVTWGESGYIKMSKDKKNQCGIATMASYPLV 810
W TWGE GYIKM++++ NQCGIAT +SYP V
Sbjct: 308 WGTTWGEQGYIKMARNQNNQCGIATASSYPTV 339
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 284 bits (727), Expect = 2e-76
Identities = 148/273 (54%), Positives = 178/273 (65%), Gaps = 6/273 (2%)
Frame = +1
Query: 10 EYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQ 189
EY GKH +S+ +N F DMTNEEF+ G K +G + + V P SVDWR+
Sbjct: 65 EYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHK-KGKVFHESLVLEV-PKSVDWRE 122
Query: 190 KGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXL 369
KGYVT VKNQ QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS L
Sbjct: 123 KGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGL 182
Query: 370 MDNAFRYIKDQ-GIESEGDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVA 543
MDNAF+Y+KD G+++E YPY + +C P TGF DI Q E L AVA
Sbjct: 183 MDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDI-PQREKALMKAVA 241
Query: 544 TVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGTQ----IGKKYWIVKN 711
TVGP+SVAIDAGH+SFQ YKSGIY + CS+ LDHGVL VGYG + K+WIVKN
Sbjct: 242 TVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKN 301
Query: 712 SWDVTWGESGYIKMSKDKKNQCGIATMASYPLV 810
SW WG +GY+KM+KD+ N CGI+T ASYP V
Sbjct: 302 SWGPEWGWNGYVKMAKDQNNHCGISTAASYPTV 334
>sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precursor
Length = 323
Score = 284 bits (727), Expect = 2e-76
Identities = 138/268 (51%), Positives = 184/268 (68%), Gaps = 1/268 (0%)
Frame = +1
Query: 10 EYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQ 189
+Y+ G+ T++L +N+F DMT EEF A G + + + S + + G VDWR
Sbjct: 57 KYENGEVTFNLAMNKFGDMTLEEFNAVMKGNIPRR-SAPVSVFYPKKETGPQATEVDWRT 115
Query: 190 KGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXL 369
KG VTPVK+Q QCGSCW+FS TGSLEGQ+F K LIS +EQQLVDCS
Sbjct: 116 KGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGW 175
Query: 370 MDNAFRYIK-DQGIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVAT 546
M++AF YIK + GI++E YPY A DG+C+ + + + C+G T+I S +ET L AV
Sbjct: 176 MNDAFDYIKANNGIDTEAAYPYEARDGSCRFDSNSVAATCSGHTNIASGSETGLQQAVRD 235
Query: 547 VGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVT 726
+GP+SV IDA H+SFQ Y SG+Y E SCS + LDH VLAVGYG++ G+ +W+VKNSW +
Sbjct: 236 IGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATS 295
Query: 727 WGESGYIKMSKDKKNQCGIATMASYPLV 810
WG++GYIKMS+++ N CGIAT+ASYPLV
Sbjct: 296 WGDAGYIKMSRNRNNNCGIATVASYPLV 323
>sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine proteinase 1) [Contains: Cathepsin
L heavy chain; Cathepsin L light chain]
Length = 341
Score = 283 bits (724), Expect = 4e-76
Identities = 142/273 (52%), Positives = 182/273 (66%), Gaps = 10/273 (3%)
Frame = +1
Query: 22 GKHTYSLGLNQFADMTNEEFKAKYLGIMKT--------KPTLEGSTYMAPENIGVLPASV 177
GK ++ L +N++AD+ + EF+ G T + +G T+++P ++ LP SV
Sbjct: 70 GKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHV-TLPKSV 128
Query: 178 DWRQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXX 357
DWR KG VT VK+Q CGSCW+FS+TG+LEGQ+FRK+ L+S SEQ LVDCS
Sbjct: 129 DWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGC 188
Query: 358 XXXLMDNAFRYIKDQ-GIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLAN 534
LMDNAFRYIKD GI++E YPY A D +C N + GFTDI +E +A
Sbjct: 189 NGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAE 248
Query: 535 AVATVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGT-QIGKKYWIVKN 711
AVATVGPVSVAIDA H SFQ Y G+YNE C LDHGVL VG+GT + G+ YW+VKN
Sbjct: 249 AVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKN 308
Query: 712 SWDVTWGESGYIKMSKDKKNQCGIATMASYPLV 810
SW TWG+ G+IKM ++K+NQCGIA+ +SYPLV
Sbjct: 309 SWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 341
>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 282 bits (722), Expect = 8e-76
Identities = 149/273 (54%), Positives = 178/273 (65%), Gaps = 5/273 (1%)
Frame = +1
Query: 7 GEYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWR 186
GEY GKH +++ +N F DMTNEEF+ G K +G + P + + P +VDWR
Sbjct: 64 GEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHK-KGRLFQEPLMLQI-PKTVDWR 121
Query: 187 QKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXX 366
+KG VTPVKNQ QCGSCW+FSA+G LEGQ F K +LIS SEQ LVDCS
Sbjct: 122 EKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGG 181
Query: 367 LMDNAFRYIKDQ-GIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVA 543
LMD AF+YIK+ G++SE YPY A DG+CK V TGF DI Q E L AVA
Sbjct: 182 LMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDI-PQQEKALMKAVA 240
Query: 544 TVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGY---GTQIGK-KYWIVKN 711
TVGP+SVA+DA H S Q Y SGIY E +CS+ LDHGVL VGY GT K KYW+VKN
Sbjct: 241 TVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKN 300
Query: 712 SWDVTWGESGYIKMSKDKKNQCGIATMASYPLV 810
SW WG GYIK++KD+ N CG+AT ASYP+V
Sbjct: 301 SWGKEWGMDGYIKIAKDRNNHCGLATAASYPIV 333
>sp|P25784|CYSP3_HOMAM Digestive cysteine proteinase 3 precursor
Length = 321
Score = 282 bits (722), Expect = 8e-76
Identities = 141/268 (52%), Positives = 181/268 (67%), Gaps = 1/268 (0%)
Frame = +1
Query: 10 EYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQ 189
+++ G+ T+ + +NQF DMTNEEF A G K + + A G + A VDWR
Sbjct: 57 KFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSRGEPKAVFTA--EAGPMAADVDWRT 114
Query: 190 KGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXL 369
K VTPVK+Q+QCGSCW+FSATG+LEGQ+F KN+ L+S SEQQLVDCS
Sbjct: 115 KALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGW 174
Query: 370 MDNAFRYIKDQG-IESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVAT 546
M +AF YIKD G I++E YPY A D +C+ + + I CTG ++Q E L AV+
Sbjct: 175 MTSAFDYIKDNGGIDTESSYPYEAEDRSCRFDANSIGAICTGSVEVQHTEEA-LQEAVSG 233
Query: 547 VGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVT 726
VGP+SVAIDA H SFQ Y SG+Y E++CS T LDHGVLAVGYGT+ K YW+VKNSW +
Sbjct: 234 VGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSS 293
Query: 727 WGESGYIKMSKDKKNQCGIATMASYPLV 810
WG++GYIKMS+++ N CGIA+ SYP V
Sbjct: 294 WGDAGYIKMSRNRDNNCGIASEPSYPTV 321
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,215,857
Number of Sequences: 369166
Number of extensions: 2019192
Number of successful extensions: 6132
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5545
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8742211660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)