Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_017_C22
(843 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 479 e-135
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 479 e-135
sp|P53458|ACT5_DIPDE Actin-5 478 e-135
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 478 e-135
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 478 e-135
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 478 e-135
sp|P92176|ACT2_LUMTE Actin-2 478 e-134
sp|P12716|ACTC_PISOC Actin, cytoplasmic 477 e-134
sp|P53470|ACT1_SCHMA Actin-1 477 e-134
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 477 e-134
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 479 bits (1232), Expect = e-135
Identities = 234/250 (93%), Positives = 244/250 (97%)
Frame = +2
Query: 2 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 181
TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDL 186
Query: 182 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDG 361
TDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDG
Sbjct: 187 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDG 246
Query: 362 QVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTM 541
QVITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM
Sbjct: 247 QVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTM 306
Query: 542 YPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 721
+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDES
Sbjct: 307 FPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 366
Query: 722 GPGIVHRKCF 751
GP IVHRKCF
Sbjct: 367 GPSIVHRKCF 376
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 479 bits (1232), Expect = e-135
Identities = 234/250 (93%), Positives = 245/250 (98%)
Frame = +2
Query: 2 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 181
TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDL 186
Query: 182 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDG 361
TDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDG
Sbjct: 187 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDG 246
Query: 362 QVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTM 541
QVITIGNERFRCPEALFQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM
Sbjct: 247 QVITIGNERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTM 306
Query: 542 YPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 721
+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDES
Sbjct: 307 FPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 366
Query: 722 GPGIVHRKCF 751
GP IVHRKCF
Sbjct: 367 GPSIVHRKCF 376
>sp|P53458|ACT5_DIPDE Actin-5
Length = 371
Score = 478 bits (1231), Expect = e-135
Identities = 236/250 (94%), Positives = 244/250 (97%)
Frame = +2
Query: 2 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 181
TFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL
Sbjct: 122 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 181
Query: 182 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDG 361
TDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM A++SS+LEKSYELPDG
Sbjct: 182 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSNAASSSALEKSYELPDG 241
Query: 362 QVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTM 541
QVITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM
Sbjct: 242 QVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTM 301
Query: 542 YPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 721
YPGI+DRMQKEISALAP TMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES
Sbjct: 302 YPGISDRMQKEISALAPSTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 361
Query: 722 GPGIVHRKCF 751
GPGIVHRKCF
Sbjct: 362 GPGIVHRKCF 371
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 478 bits (1230), Expect = e-135
Identities = 233/250 (93%), Positives = 244/250 (97%)
Frame = +2
Query: 2 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 181
TFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDL 186
Query: 182 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDG 361
TDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDG
Sbjct: 187 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDG 246
Query: 362 QVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTM 541
QVITIGNERFRCPEA++QPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM
Sbjct: 247 QVITIGNERFRCPEAMYQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTM 306
Query: 542 YPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 721
+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDES
Sbjct: 307 FPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 366
Query: 722 GPGIVHRKCF 751
GP IVHRKCF
Sbjct: 367 GPSIVHRKCF 376
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 478 bits (1230), Expect = e-135
Identities = 234/250 (93%), Positives = 243/250 (97%)
Frame = +2
Query: 2 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 181
TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDL 186
Query: 182 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDG 361
TDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA+ SSSLEKSYELPDG
Sbjct: 187 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYELPDG 246
Query: 362 QVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTM 541
QVITIGNERFRCPEA+FQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM
Sbjct: 247 QVITIGNERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTM 306
Query: 542 YPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 721
+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDES
Sbjct: 307 FPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 366
Query: 722 GPGIVHRKCF 751
GP IVHRKCF
Sbjct: 367 GPSIVHRKCF 376
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 478 bits (1230), Expect = e-135
Identities = 233/250 (93%), Positives = 244/250 (97%)
Frame = +2
Query: 2 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 181
TFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDL 186
Query: 182 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDG 361
TDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDG
Sbjct: 187 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDG 246
Query: 362 QVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTM 541
QVITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM
Sbjct: 247 QVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTM 306
Query: 542 YPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 721
+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDES
Sbjct: 307 FPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 366
Query: 722 GPGIVHRKCF 751
GP IVHRKCF
Sbjct: 367 GPSIVHRKCF 376
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 478 bits (1229), Expect = e-134
Identities = 235/250 (94%), Positives = 244/250 (97%)
Frame = +2
Query: 2 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 181
TFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL
Sbjct: 127 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 186
Query: 182 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDG 361
TDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TASASSSLEKSYELPDG
Sbjct: 187 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTASASSSLEKSYELPDG 246
Query: 362 QVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTM 541
QVITIGNERFRCPEA+F SFLG+ESVGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TM
Sbjct: 247 QVITIGNERFRCPEAMFHASFLGMESVGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTM 306
Query: 542 YPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 721
+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDES
Sbjct: 307 FPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 366
Query: 722 GPGIVHRKCF 751
GP IVHRKCF
Sbjct: 367 GPSIVHRKCF 376
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 477 bits (1228), Expect = e-134
Identities = 233/250 (93%), Positives = 244/250 (97%)
Frame = +2
Query: 2 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 181
TFN PAMYVAIQAVLSLYASGRTTGIV DSGDGV+HTVPIYEGYALPHAILRLDLAGRDL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 186
Query: 182 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDG 361
TDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDG
Sbjct: 187 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDG 246
Query: 362 QVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTM 541
QVITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM
Sbjct: 247 QVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTM 306
Query: 542 YPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 721
+PGIADRMQKE++ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDES
Sbjct: 307 FPGIADRMQKEVTALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 366
Query: 722 GPGIVHRKCF 751
GP IVHRKCF
Sbjct: 367 GPSIVHRKCF 376
>sp|P53470|ACT1_SCHMA Actin-1
Length = 376
Score = 477 bits (1227), Expect = e-134
Identities = 235/250 (94%), Positives = 244/250 (97%)
Frame = +2
Query: 2 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 181
TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL
Sbjct: 127 TFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 186
Query: 182 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDG 361
TDY+MKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SS+LEKSYELPDG
Sbjct: 187 TDYMMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSALEKSYELPDG 246
Query: 362 QVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTM 541
QVITIGNERFRCPEALFQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLY+N VLSGGSTM
Sbjct: 247 QVITIGNERFRCPEALFQPSFLGMEASGIHETTYNSIMKCDVDIRKDLYSNTVLSGGSTM 306
Query: 542 YPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 721
YPGIADRMQKEISALAP TMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES
Sbjct: 307 YPGIADRMQKEISALAPSTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 366
Query: 722 GPGIVHRKCF 751
GPGIVHRKCF
Sbjct: 367 GPGIVHRKCF 376
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 477 bits (1227), Expect = e-134
Identities = 233/250 (93%), Positives = 243/250 (97%)
Frame = +2
Query: 2 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 181
TFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDL 186
Query: 182 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDG 361
TDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDG
Sbjct: 187 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDG 246
Query: 362 QVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTM 541
QVITIGNERFRCPEA FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM
Sbjct: 247 QVITIGNERFRCPEATFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTM 306
Query: 542 YPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 721
+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDES
Sbjct: 307 FPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 366
Query: 722 GPGIVHRKCF 751
GP IVHRKCF
Sbjct: 367 GPSIVHRKCF 376
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,154,976
Number of Sequences: 369166
Number of extensions: 2041423
Number of successful extensions: 6033
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5869
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8245425915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)