Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_017_A04
(182 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q29485|PLMN_ERIEU Plasminogen precursor [Contains: Plasm... 48 8e-06
sp|P06868|PLMN_BOVIN Plasminogen precursor [Contains: Plasm... 47 1e-05
sp|P81286|PLMN_SHEEP Plasminogen 44 9e-05
sp|Q61754|KLK24_MOUSE Glandular kallikrein K24 precursor (T... 44 1e-04
sp|Q9JM71|KLK27_MOUSE Glandular kallikrein K27 precursor (T... 43 2e-04
sp|Q9QUL7|TRYG1_MOUSE Tryptase gamma precursor (Transmembra... 42 3e-04
sp|Q61759|KLK21_MOUSE Glandular kallikrein K21 precursor (T... 42 3e-04
sp|Q9I8X1|VSP2_AGKAC Venom serine proteinase Dav-PA precursor 42 3e-04
sp|P00747|PLMN_HUMAN Plasminogen precursor [Contains: Plasm... 42 4e-04
sp|P08519|APOA_HUMAN Apolipoprotein(a) precursor (Apo(a)) (... 42 4e-04
>sp|Q29485|PLMN_ERIEU Plasminogen precursor [Contains: Plasmin heavy chain A; Activation
peptide; Plasmin heavy chain A, short form; Plasmin
light chain B]
Length = 810
Score = 47.8 bits (112), Expect = 8e-06
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Frame = +3
Query: 3 VNVRKRSIYICGGTLINPGWVVTAAHCLKTIE--AVNSVPLGEMIDTR 140
V++R+ + CGGTLI+P WVVTAAHCL+ A+ V LG +TR
Sbjct: 597 VSLRRFGQHFCGGTLISPEWVVTAAHCLEKFSNPAIYKVVLGAHQETR 644
>sp|P06868|PLMN_BOVIN Plasminogen precursor [Contains: Plasmin heavy chain A; Activation
peptide; Plasmin heavy chain A, short form; Plasmin
light chain B]
Length = 812
Score = 47.4 bits (111), Expect = 1e-05
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = +3
Query: 3 VNVRKRSIYICGGTLINPGWVVTAAHCLKTIEAVN 107
V++R+ S + CGGTLI+P WV+TAAHCL I A++
Sbjct: 599 VSLRRSSRHFCGGTLISPKWVLTAAHCLDNILALS 633
>sp|P81286|PLMN_SHEEP Plasminogen
Length = 343
Score = 44.3 bits (103), Expect = 9e-05
Identities = 20/32 (62%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
Frame = +3
Query: 3 VNVRKRSI-YICGGTLINPGWVVTAAHCLKTI 95
V++R+RS + CGGTLI+P WV+TAAHCL +I
Sbjct: 129 VSLRRRSREHFCGGTLISPEWVLTAAHCLDSI 160
>sp|Q61754|KLK24_MOUSE Glandular kallikrein K24 precursor (Tissue kallikrein 24) (mGK-24)
Length = 263
Score = 43.9 bits (102), Expect = 1e-04
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3
Query: 3 VNVRKRSIYICGGTLINPGWVVTAAHCLKTIEAVNSVPLGE 125
V V + + YICGG L+NP WV+TAAHC + +V LG+
Sbjct: 40 VAVFRYNKYICGGVLLNPNWVLTAAHCYGNATSQYNVWLGK 80
>sp|Q9JM71|KLK27_MOUSE Glandular kallikrein K27 precursor (Tissue kallikrein 27) (mGK-27)
(mKlk27)
Length = 263
Score = 43.1 bits (100), Expect = 2e-04
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +3
Query: 3 VNVRKRSIYICGGTLINPGWVVTAAHCLKTIEAVNSVPLGE 125
V V + + YICGG L++P WV+TAAHC + ++V LG+
Sbjct: 40 VAVLRSNKYICGGVLLDPNWVLTAAHCYGNDTSQHNVWLGK 80
>sp|Q9QUL7|TRYG1_MOUSE Tryptase gamma precursor (Transmembrane tryptase) [Contains:
Tryptase gamma light chain; Tryptase gamma heavy chain]
Length = 311
Score = 42.4 bits (98), Expect = 3e-04
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
Frame = +3
Query: 6 NVRKRSIYICGGTLINPGWVVTAAHCLKTIEAVNS----VPLGEMIDT 137
++R +++CGG+L++P WV+TAAHC +VNS V LGE+ T
Sbjct: 46 SLRLHKVHVCGGSLLSPEWVLTAAHCFS--GSVNSSDYQVHLGELTVT 91
>sp|Q61759|KLK21_MOUSE Glandular kallikrein K21 precursor (Tissue kallikrein 21) (mGK-21)
Length = 261
Score = 42.4 bits (98), Expect = 3e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 3 VNVRKRSIYICGGTLINPGWVVTAAHC 83
V V + + YICGG L+NP WV+TAAHC
Sbjct: 40 VAVFRYNKYICGGVLLNPNWVLTAAHC 66
>sp|Q9I8X1|VSP2_AGKAC Venom serine proteinase Dav-PA precursor
Length = 258
Score = 42.4 bits (98), Expect = 3e-04
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3
Query: 27 YICGGTLINPGWVVTAAHCLKT 92
+ CGGTLINP WVVTAAHC T
Sbjct: 48 FFCGGTLINPEWVVTAAHCDST 69
>sp|P00747|PLMN_HUMAN Plasminogen precursor [Contains: Plasmin heavy chain A; Activation
peptide; Angiostatin; Plasmin heavy chain A, short form;
Plasmin light chain B]
Length = 810
Score = 42.0 bits (97), Expect = 4e-04
Identities = 18/30 (60%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = +3
Query: 3 VNVRKR-SIYICGGTLINPGWVVTAAHCLK 89
V++R R ++ CGGTLI+P WV+TAAHCL+
Sbjct: 596 VSLRTRFGMHFCGGTLISPEWVLTAAHCLE 625
>sp|P08519|APOA_HUMAN Apolipoprotein(a) precursor (Apo(a)) (Lp(a))
Length = 4548
Score = 42.0 bits (97), Expect = 4e-04
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +3
Query: 27 YICGGTLINPGWVVTAAHCLK 89
+ CGGTLI+P WV+TAAHCLK
Sbjct: 4352 HFCGGTLISPEWVLTAAHCLK 4372
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,693,368
Number of Sequences: 369166
Number of extensions: 261377
Number of successful extensions: 1169
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 68,354,980
effective HSP length: 33
effective length of database: 62,258,725
effective search space used: 1680985575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)