Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_P21
(559 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP... 175 6e-44
sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP... 163 2e-40
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 160 2e-39
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 159 6e-39
sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP... 149 3e-36
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 146 3e-35
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 143 3e-34
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 137 2e-32
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 137 2e-32
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 135 9e-32
>sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 619
Score = 175 bits (444), Expect = 6e-44
Identities = 80/136 (58%), Positives = 103/136 (75%), Gaps = 2/136 (1%)
Frame = +2
Query: 2 FMGYNFGKYLQHWLDLEKPGRKMPLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRVN 181
FMGYNFG YLQHW+DL K GRK+P I+HVNWFR + KF+WPG+G+NIRVIDW+ RR++
Sbjct: 481 FMGYNFGHYLQHWIDLNKDGRKVPKIYHVNWFRRDANNKFLWPGYGQNIRVIDWIVRRLD 540
Query: 182 GE-DIAEPSPIGLLPKHGTINVTGL-DAKWDEMFSLPKAYLSEDVQETMKFLREQTGEDL 355
GE DI +PIG++PK G IN +GL D +WDE+ S+PK Y + D +E KFL EQ G DL
Sbjct: 541 GEPDIGVDTPIGIVPKKGAINASGLPDIQWDELMSVPKEYWTNDAKEIRKFLEEQVGPDL 600
Query: 356 PAGIIQELNEQEKRIH 403
P I E++ QE+RI+
Sbjct: 601 PKEIRAEMDAQEERIN 616
>sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 643
Score = 163 bits (413), Expect = 2e-40
Identities = 75/135 (55%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +2
Query: 2 FMGYNFGKYLQHWLDLEKPGRKMPLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRVN 181
FMGYNFG+Y++HW+ L +P K+P IFHVNWFR + KF+WPG+G+NIRVIDW+ RR +
Sbjct: 504 FMGYNFGRYMRHWMKLGQPPHKVPKIFHVNWFRQSADHKFLWPGYGDNIRVIDWILRRCS 563
Query: 182 GE-DIAEPSPIGLLPKHGTINVTGL-DAKWDEMFSLPKAYLSEDVQETMKFLREQTGEDL 355
G+ IAE +PIG +PK GTIN+ GL + WDE+ S+PK+Y ED+ ET F Q G DL
Sbjct: 564 GDATIAEETPIGFIPKKGTINLEGLPNVNWDELMSIPKSYWLEDMVETKTFFENQVGSDL 623
Query: 356 PAGIIQELNEQEKRI 400
P I +EL Q +RI
Sbjct: 624 PPEIAKELEAQTERI 638
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 160 bits (406), Expect = 2e-39
Identities = 70/138 (50%), Positives = 100/138 (72%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 FMGYNFGKYLQHWLDLE-KPGRKMPLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRV 178
F GYNFG YL+HWL +E + G ++P IFHVNWFR ++ G F+WPGFGEN RV+DW+CRR+
Sbjct: 503 FFGYNFGHYLEHWLSMEGRKGAQLPRIFHVNWFRRDEAGHFLWPGFGENARVLDWICRRL 562
Query: 179 NGEDIAEPSPIGLLPKHGTINVTGLDA-KWDEMFSLPKAYLSEDVQETMKFLREQTGEDL 355
GED A +PIGL+PK G ++++GL A ++FSLPK + ++V++ +L EQ +DL
Sbjct: 563 EGEDSARETPIGLVPKEGALDLSGLRAIDTTQLFSLPKDFWEQEVRDIRSYLTEQVNQDL 622
Query: 356 PAGIIQELNEQEKRIHNM 409
P ++ EL E+R+H M
Sbjct: 623 PKEVLAELEALERRVHKM 640
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 159 bits (401), Expect = 6e-39
Identities = 68/138 (49%), Positives = 101/138 (73%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 FMGYNFGKYLQHWLDLE-KPGRKMPLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRV 178
F GYNFG+YL+HWL +E + G ++P IFHVNWFR ++ G+F+WPGFGEN RV+DW+CRR+
Sbjct: 503 FFGYNFGRYLEHWLSMEGQKGARLPRIFHVNWFRRDEAGRFLWPGFGENARVLDWICRRL 562
Query: 179 NGEDIAEPSPIGLLPKHGTINVTGLDA-KWDEMFSLPKAYLSEDVQETMKFLREQTGEDL 355
GED A+ +PIGL+PK G ++++GL A ++FS+PK + ++V++ +L EQ +DL
Sbjct: 563 EGEDSAQETPIGLVPKEGALDLSGLSAVDTSQLFSIPKDFWEQEVRDIRGYLTEQVNQDL 622
Query: 356 PAGIIQELNEQEKRIHNM 409
P ++ EL E R+ M
Sbjct: 623 PKEVLAELEALEGRVQKM 640
>sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 647
Score = 149 bits (377), Expect = 3e-36
Identities = 69/138 (50%), Positives = 95/138 (68%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 FMGYNFGKYLQHWLDLEKPGRKMPLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRVN 181
F GYNFG Y+ HWL +EK G+ +P IFHVNWFR + +GKF+WPG+GEN RV++W+ RRVN
Sbjct: 511 FFGYNFGDYVAHWLSMEKRGQ-VPKIFHVNWFRKSAEGKFMWPGYGENSRVLEWILRRVN 569
Query: 182 GEDIAEPSPIGLLPKHGTINVTGLDAKWD--EMFSLPKAYLSEDVQETMKFLREQTGEDL 355
GE S IG +P G +N+ G+ K D E+FSLPK + S++V++ + Q G DL
Sbjct: 570 GESCYVDSAIGHIPAEGALNLDGMKDKVDVKEIFSLPKEFWSQEVKDIRTYFESQVGADL 629
Query: 356 PAGIIQELNEQEKRIHNM 409
PA I Q+L+E R+ N+
Sbjct: 630 PASIYQQLDELSSRVDNL 647
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 146 bits (369), Expect = 3e-35
Identities = 68/138 (49%), Positives = 93/138 (67%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 FMGYNFGKYLQHWLDL-EKPGRKMPLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRV 178
F GYNFGKYL HWL + +P K+P IFHVNWFR + GKF+WPGFGEN RV++WM R+
Sbjct: 485 FFGYNFGKYLAHWLSMAHRPAAKLPKIFHVNWFRKDKNGKFLWPGFGENSRVLEWMFGRI 544
Query: 179 NGEDIAEPSPIGLLPKHGTINVTGL-DAKWDEMFSLPKAYLSEDVQETMKFLREQTGEDL 355
GED A+ +PIG +PK +N+ GL D +E+F + K + ++V+E K+L +Q DL
Sbjct: 545 EGEDSAKLTPIGYVPKEDALNLKGLGDVNVEELFGISKEFWEKEVEEIDKYLEDQVNADL 604
Query: 356 PAGIIQELNEQEKRIHNM 409
P I +EL ++RI M
Sbjct: 605 PYEIERELRALKQRISQM 622
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 143 bits (360), Expect = 3e-34
Identities = 66/138 (47%), Positives = 92/138 (66%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 FMGYNFGKYLQHWLDL-EKPGRKMPLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRV 178
F GYNFGKYL HWL + +P K+P IFHVNWFR + GKF+WPGFGEN RV++WM R+
Sbjct: 485 FFGYNFGKYLAHWLSMAHRPAAKLPKIFHVNWFRKDKDGKFLWPGFGENSRVLEWMFGRI 544
Query: 179 NGEDIAEPSPIGLLPKHGTINVTGL-DAKWDEMFSLPKAYLSEDVQETMKFLREQTGEDL 355
GED A+ +PIG +PK +N+ GL +E+F + K + ++V+E ++L +Q DL
Sbjct: 545 EGEDSAKLTPIGYIPKENALNLKGLGGVNVEELFGISKEFWEKEVEEIDRYLEDQVNTDL 604
Query: 356 PAGIIQELNEQEKRIHNM 409
P I +EL ++RI M
Sbjct: 605 PYEIERELRALKQRISQM 622
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 137 bits (345), Expect = 2e-32
Identities = 63/138 (45%), Positives = 92/138 (66%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 FMGYNFGKYLQHWLDL-EKPGRKMPLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRV 178
F GYNFGKYL HWL + + P K+P IFHVNWFR + +GKF+WPGFGEN RV++WM R+
Sbjct: 485 FFGYNFGKYLAHWLSMAQHPAAKLPKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRI 544
Query: 179 NGEDIAEPSPIGLLPKHGTINVTGL-DAKWDEMFSLPKAYLSEDVQETMKFLREQTGEDL 355
+G+ + +PIG +PK +N+ GL E+FS+ K + ++V++ K+L +Q DL
Sbjct: 545 DGKASTKLTPIGYIPKEDALNLKGLGHINMMELFSISKEFWEKEVEDIEKYLEDQVNADL 604
Query: 356 PAGIIQELNEQEKRIHNM 409
P I +E+ ++RI M
Sbjct: 605 PCEIEREILALKQRISQM 622
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 137 bits (345), Expect = 2e-32
Identities = 64/138 (46%), Positives = 93/138 (67%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 FMGYNFGKYLQHWLDL-EKPGRKMPLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRV 178
F GYNFGKYL HWL + + P K+P IFHVNWFR + +GKF+WPGFGEN RV++WM R+
Sbjct: 485 FFGYNFGKYLAHWLSMAQHPAAKLPKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRI 544
Query: 179 NGEDIAEPSPIGLLPKHGTINVTGL-DAKWDEMFSLPKAYLSEDVQETMKFLREQTGEDL 355
+G+ A+ +PIG +PK +N+ GL E+FS+ K + ++V++ K+L +Q DL
Sbjct: 545 DGKAGAKLTPIGYIPKEDALNLKGLGHINVMELFSISKEFWEKEVEDIEKYLEDQVNADL 604
Query: 356 PAGIIQELNEQEKRIHNM 409
P I +E+ ++RI M
Sbjct: 605 PCEIEREILALKQRISQM 622
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 135 bits (339), Expect = 9e-32
Identities = 64/138 (46%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 FMGYNFGKYLQHWLDL-EKPGRKMPLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRV 178
F GYNFG+YL HWL + ++P K+P IFHVNWFR + G+F+WPGFGEN RV++WM RV
Sbjct: 485 FFGYNFGQYLAHWLSMAQRPAAKLPKIFHVNWFRKDKAGRFLWPGFGENSRVLEWMFNRV 544
Query: 179 NGEDIAEPSPIGLLPKHGTINVTGL-DAKWDEMFSLPKAYLSEDVQETMKFLREQTGEDL 355
GE A +PIG +P +++ GL D E+F + K + E+V+E K+L EQ DL
Sbjct: 545 VGEGGASVTPIGYIPDEDALDLRGLGDVDVKELFHISKEFWEEEVEEIQKYLEEQVNVDL 604
Query: 356 PAGIIQELNEQEKRIHNM 409
P I ++ ++RI M
Sbjct: 605 PPEIKNQVLALKQRISQM 622
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,578,145
Number of Sequences: 369166
Number of extensions: 1479522
Number of successful extensions: 3690
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3625
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3980545740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)