Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dr_sW_016_P19 (888 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P51660|DHB4_MOUSE Peroxisomal multifunctional enzyme typ... 256 8e-68 sp|P97852|DHB4_RAT Peroxisomal multifunctional enzyme type ... 248 1e-65 sp|P51659|DHB4_HUMAN Peroxisomal multifunctional enzyme typ... 246 8e-65 sp|Q01373|FOX2_NEUCR Peroxisomal hydratase-dehydrogenase-ep... 181 3e-45 sp|Q02207|FOX2_YEAST Peroxisomal hydratase-dehydrogenase-ep... 169 7e-42 sp|P22414|FOX2_CANTR Peroxisomal hydratase-dehydrogenase-ep... 160 6e-39 sp|P50203|PHAB_ACISR Acetoacetyl-CoA reductase 65 2e-10 sp|Q93X68|FABG5_BRANA 3-oxoacyl-[acyl-carrier-protein] redu... 64 6e-10 sp|P45375|PHBB_CHRVI Acetoacetyl-CoA reductase 61 5e-09 sp|P73826|FABG2_SYNY3 3-oxoacyl-[acyl-carrier-protein] redu... 61 5e-09
>sp|P51660|DHB4_MOUSE Peroxisomal multifunctional enzyme type 2 (MFE-2) (D-bifunctional protein) (DBP) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) [Includes: D-3-hydroxyacyl-CoA dehydratase ; 3-hydroxyacyl-CoA dehydrogenase ] Length = 735 Score = 256 bits (653), Expect = 8e-68 Identities = 139/287 (48%), Positives = 186/287 (64%), Gaps = 3/287 (1%) Frame = +3 Query: 3 AWNYMRNQKFGRIIFTSSSSGIYGNFGQANYSAAKLGLVGLCNTLAIEGAKYNIKCNTIA 182 AW++M+ Q +GRI+ TSS+SGIYGNFGQANYSAAKLG++GLCNTLAIEG K NI CNTIA Sbjct: 134 AWDHMKKQNYGRILMTSSASGIYGNFGQANYSAAKLGILGLCNTLAIEGRKNNIHCNTIA 193 Query: 183 PVAGSRLTEDVFPPELYNAFKPEYVSPLVLYLCHPSNINSGNLFEVGAGWIGKVRWEVSR 362 P AGSR+TE V P +L A KPEYV+PLVL+LCH S +G LFEVGAGWIGK+RWE + Sbjct: 194 PNAGSRMTETVLPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTL 253 Query: 363 GVVLKKKENKFFTVEDVRDQWDEINDFTESRHPTSNKDSIQNFLEVXXXXXXXXXXXXXX 542 G +++K+ N+ T E VRD W++I DF+ + P + ++S +EV Sbjct: 254 GAIVRKR-NQPMTPEAVRDNWEKICDFSNASKPQTIQESTGGIVEVLHKVDSEGISPNRT 312 Query: 543 XXXXXXXXXXXF--IGKSKTSTYESISFQKAILYAISVGINNSKIENLKFLYENHSNFSV 716 +G S S + ++I+YA+ VG + ++LKF+YE ++FS Sbjct: 313 SHAAPAATSGFVGAVGHKLPSFSSSYTELQSIMYALGVGASVKNPKDLKFVYEGSADFSC 372 Query: 717 LPTFAVIASFDNVFN-MLNEVMSASDNAFDLSQVLHGEQYLEVYKSL 854 LPTF VI + ++ N L EV S F+ ++ LHGEQYLE+YK L Sbjct: 373 LPTFGVIVAQKSMMNGGLAEVPGLS---FNFAKALHGEQYLELYKPL 416
>sp|P97852|DHB4_RAT Peroxisomal multifunctional enzyme type 2 (MFE-2) (D-bifunctional protein) (DBP) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) [Includes: D-3-hydroxyacyl-CoA dehydratase ; 3-hydroxyacyl-CoA dehydrogenase ] Length = 735 Score = 248 bits (634), Expect = 1e-65 Identities = 139/287 (48%), Positives = 182/287 (63%), Gaps = 3/287 (1%) Frame = +3 Query: 3 AWNYMRNQKFGRIIFTSSSSGIYGNFGQANYSAAKLGLVGLCNTLAIEGAKYNIKCNTIA 182 AW++M+ Q +GRII T+S+SGIYGNFGQANYSAAKLGL+GL NTL IEG K NI CNTIA Sbjct: 134 AWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIA 193 Query: 183 PVAGSRLTEDVFPPELYNAFKPEYVSPLVLYLCHPSNINSGNLFEVGAGWIGKVRWEVSR 362 P AGSR+TE V P +L A KPEYV+PLVL+LCH S +G LFEVGAGWIGK+RWE + Sbjct: 194 PNAGSRMTETVMPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTL 253 Query: 363 GVVLKKKENKFFTVEDVRDQWDEINDFTESRHPTSNKDSIQNFLEV--XXXXXXXXXXXX 536 G +++K+ N+ T E VRD W +I DF+ + P S ++S +EV Sbjct: 254 GAIVRKR-NQPMTPEAVRDNWVKICDFSNASKPKSIQESTGGIIEVLHKIDSEGISQNHT 312 Query: 537 XXXXXXXXXXXXXFIGKSKTSTYESISFQKAILYAISVGINNSKIENLKFLYENHSNFSV 716 +G S S + + I+YA+ VG + ++LKF+YE ++FS Sbjct: 313 GQVASADASGFAGVVGHKLPSFSSSYTELQCIMYALGVGASVKNPKDLKFVYEGSADFSC 372 Query: 717 LPTFAVIASFDNVFN-MLNEVMSASDNAFDLSQVLHGEQYLEVYKSL 854 LPTF VI + ++ + L EV S N ++VLHGEQYLE+YK L Sbjct: 373 LPTFGVIVAQKSLMSGGLAEVPGLSIN---FAKVLHGEQYLELYKPL 416
>sp|P51659|DHB4_HUMAN Peroxisomal multifunctional enzyme type 2 (MFE-2) (D-bifunctional protein) (DBP) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) [Includes: D-3-hydroxyacyl-CoA dehydratase ; 3-hydroxyacyl-CoA dehydrogenase ] Length = 736 Score = 246 bits (627), Expect = 8e-65 Identities = 139/288 (48%), Positives = 181/288 (62%), Gaps = 4/288 (1%) Frame = +3 Query: 3 AWNYMRNQKFGRIIFTSSSSGIYGNFGQANYSAAKLGLVGLCNTLAIEGAKYNIKCNTIA 182 AW +M+ QK+GRII TSS+SGIYGNFGQANYSAAKLGL+GL N+LAIEG K NI CNTIA Sbjct: 134 AWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIA 193 Query: 183 PVAGSRLTEDVFPPELYNAFKPEYVSPLVLYLCHPSNINSGNLFEVGAGWIGKVRWEVSR 362 P AGSR+T+ V P +L A KPEYV+PLVL+LCH S +G LFEVGAGWIGK+RWE + Sbjct: 194 PNAGSRMTQTVMPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTL 253 Query: 363 GVVLKKKENKFFTVEDVRDQWDEINDFTESRHPTSNKDSIQNFLEVXXXXXXXXXXXXXX 542 G ++++K N T E V+ W +I DF + P S ++S + +EV Sbjct: 254 GAIVRQK-NHPMTPEAVKANWKKICDFENASKPQSIQESTGSIIEVLSKIDSEGGVSANH 312 Query: 543 XXXXXXXXXXXF---IGKSKTSTYESISFQKAILYAISVGINNSKIENLKFLYENHSNFS 713 F IG+ + + +AI+YA+ VG + ++LKF+YE S+FS Sbjct: 313 TSRATSTATSGFAGAIGQKLPPFSYAYTELEAIMYALGVGASIKDPKDLKFIYEGSSDFS 372 Query: 714 VLPTFAVIASFDNVF-NMLNEVMSASDNAFDLSQVLHGEQYLEVYKSL 854 LPTF VI ++ L E+ S N ++VLHGEQYLE+YK L Sbjct: 373 CLPTFGVIIGQKSMMGGGLAEIPGLSIN---FAKVLHGEQYLELYKPL 417
>sp|Q01373|FOX2_NEUCR Peroxisomal hydratase-dehydrogenase-epimerase (HDE) (Multifunctional beta-oxidation protein) (MFP) [Includes: 2-enoyl-CoA hydratase ; D-3-hydroxyacyl CoA dehydrogenase ] Length = 894 Score = 181 bits (458), Expect = 3e-45 Identities = 110/288 (38%), Positives = 157/288 (54%), Gaps = 6/288 (2%) Frame = +3 Query: 3 AWNYMRNQKFGRIIFTSSSSGIYGNFGQANYSAAKLGLVGLCNTLAIEGAKYNIKCNTIA 182 AW Y QK+GR++ T+S+SGIYGNFGQANYSAAK ++G +A+EGAKYNI NTIA Sbjct: 428 AWPYFLKQKYGRVLNTTSTSGIYGNFGQANYSAAKCAILGFSRAIALEGAKYNIYVNTIA 487 Query: 183 PVAGSRLTEDVFPPELYNAFKPEYVSPLVLYLCHPS--NINSGNLFEVGAGWIGKVRWEV 356 P AG+ +T+ + P EL AFKP+YV+PLVL LC +G L+EVG+GW G+ RW+ Sbjct: 488 PNAGTAMTKTILPEELVQAFKPDYVAPLVLALCSDKVPKKPTGGLYEVGSGWCGQTRWQR 547 Query: 357 SRGVVLKKKENKFFTVEDVRDQWDEINDF-TESRHPTSNKDSIQNFLEVXXXXXXXXXXX 533 S G + T E+V W++I F + + HP DSI+ + Sbjct: 548 SGGHGF--PVDVPLTPEEVVKHWNDIVTFDSRADHPEKASDSIEKIM--ANMENRVGEGK 603 Query: 534 XXXXXXXXXXXXXXFIGKSKTSTYESISFQKAILYAISVGINNSKIENLKFLYENHSNFS 713 F G T + + + LY + +G +K ++K+++E + +F Sbjct: 604 SGAAENEHLAAIKKFTGVEGKGTEYTFTERDVCLYNLGIG---AKRTDIKYIFEGNEDFE 660 Query: 714 VLPTFAVIASFDNVFNMLNEVMSASDNA---FDLSQVLHGEQYLEVYK 848 V+PTF VI F+ E+ + D+ F +LHGEQYLEV K Sbjct: 661 VVPTFGVIPPFN------TEMPFSFDDIVPNFSPMMLLHGEQYLEVRK 702
Score = 172 bits (436), Expect = 1e-42 Identities = 84/159 (52%), Positives = 113/159 (71%), Gaps = 1/159 (0%) Frame = +3 Query: 3 AWNYMRNQKFGRIIFTSSSSGIYGNFGQANYSAAKLGLVGLCNTLAIEGAKYNIKCNTIA 182 AW Y R QKFGR+I T+S++G++GNFGQANYSAAKLG+VG TLA EG KYNI N IA Sbjct: 134 AWPYFRKQKFGRVINTASAAGLFGNFGQANYSAAKLGMVGFTETLAKEGLKYNIISNVIA 193 Query: 183 PVAGSRLTEDVFPPELYNAFKPEYVSPLVLYLCHPSNIN-SGNLFEVGAGWIGKVRWEVS 359 P+A SR+TE V PP+L KPE+V PLV L H +N + +G++FEVG G + K+RWE S Sbjct: 194 PIAASRMTETVMPPDLLALMKPEWVVPLVAVLVHKNNTSETGSIFEVGGGHVAKLRWERS 253 Query: 360 RGVVLKKKENKFFTVEDVRDQWDEINDFTESRHPTSNKD 476 G++LK E+ +T + +WD++ DF+ ++PT D Sbjct: 254 SGLLLKADES--YTPGAIIKKWDQVTDFSNPQYPTGPND 290
>sp|Q02207|FOX2_YEAST Peroxisomal hydratase-dehydrogenase-epimerase (HDE) (Multifunctional beta-oxidation protein) (MFP) [Includes: 2-enoyl-CoA hydratase ; D-3-hydroxyacyl CoA dehydrogenase ] Length = 900 Score = 169 bits (429), Expect = 7e-42 Identities = 86/163 (52%), Positives = 113/163 (69%), Gaps = 5/163 (3%) Frame = +3 Query: 3 AWNYMRNQKFGRIIFTSSSSGIYGNFGQANYSAAKLGLVGLCNTLAIEGAKYNIKCNTIA 182 AW YMR+QKFGRII T+S +G++GNFGQANYSAAK+GLVGL TLA EGAKYNI N+IA Sbjct: 135 AWPYMRSQKFGRIINTASPAGLFGNFGQANYSAAKMGLVGLAETLAKEGAKYNINVNSIA 194 Query: 183 PVAGSRLTEDVFPPELYNAFKPEYVSPLVLYLCHPSNINSGNLFEVGAGWIGKVRWEVSR 362 P+A SR+TE+V PP + PE + PLVLYL H S S ++FE+ AG+ G++RWE S Sbjct: 195 PLARSRMTENVLPPHILKQLGPEKIVPLVLYLTHESTKVSNSIFELAAGFFGQLRWERSS 254 Query: 363 GVVLKKKENKFFTVEDVRDQWDEIND-----FTESRHPTSNKD 476 G + + K +T E + ++W EI D F +++HP D Sbjct: 255 GQIF-NPDPKTYTPEAILNKWKEITDYRDKPFNKTQHPYQLSD 296
Score = 146 bits (368), Expect = 9e-35 Identities = 100/287 (34%), Positives = 144/287 (50%), Gaps = 8/287 (2%) Frame = +3 Query: 6 WNYMRNQKFGRIIFTSSSSGIYGNFGQANYSAAKLGLVGLCNTLAIEGAKYNIKCNTIAP 185 W QK G II T+S+SGIYGNFGQANY+AAK ++G T+A+EGAK I N IAP Sbjct: 440 WPIFTKQKSGFIINTTSTSGIYGNFGQANYAAAKAAILGFSKTIALEGAKRGIIVNVIAP 499 Query: 186 VAGSRLTEDVF-PPELYNAFKPEYVSPLVLYLC------HPSNINSGNLFEVGAGWIGKV 344 A + +T+ +F EL N F VSPLV+ L + G LFEVG GW G+ Sbjct: 500 HAETAMTKTIFSEKELSNHFDASQVSPLVVLLASEELQKYSGRRVIGQLFEVGGGWCGQT 559 Query: 345 RWEVSRGVVLKKKENKFFTVEDVRDQWDEINDFTESR-HPTSNKDSIQNFLEVXXXXXXX 521 RW+ S G V K+ E++++ W+ I DF+ + +P+S ++S L+ Sbjct: 560 RWQRSSGYVSIKET---IEPEEIKENWNHITDFSRNTINPSSTEESSMATLQAVQKAHS- 615 Query: 522 XXXXXXXXXXXXXXXXXXFIGKSKTSTYESISFQKAILYAISVGINNSKIENLKFLYENH 701 K + + ILY + +G + + LK+ YEN Sbjct: 616 --------------------SKELDDGLFKYTTKDCILYNLGLGCTS---KELKYTYEND 652 Query: 702 SNFSVLPTFAVIASFDNVFNMLNEVMSASDNAFDLSQVLHGEQYLEV 842 +F VLPTFAVI + + + DN F+ + +LHGEQY ++ Sbjct: 653 PDFQVLPTFAVIPFMQATATLAMD--NLVDN-FNYAMLLHGEQYFKL 696
>sp|P22414|FOX2_CANTR Peroxisomal hydratase-dehydrogenase-epimerase (HDE) (Multifunctional beta-oxidation protein) (MFP) [Includes: 2-enoyl-CoA hydratase ; D-3-hydroxyacyl CoA dehydrogenase ] Length = 906 Score = 160 bits (404), Expect = 6e-39 Identities = 80/153 (52%), Positives = 104/153 (67%) Frame = +3 Query: 3 AWNYMRNQKFGRIIFTSSSSGIYGNFGQANYSAAKLGLVGLCNTLAIEGAKYNIKCNTIA 182 AW Y + QK+GRI+ TSS +G+YGNFGQANY++AK L+G TLA EGAKYNIK N IA Sbjct: 133 AWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIA 192 Query: 183 PVAGSRLTEDVFPPELYNAFKPEYVSPLVLYLCHPSNINSGNLFEVGAGWIGKVRWEVSR 362 P+A SR+TE + PP + PE V+PLVLYL N +G FEV AG+ ++RWE S Sbjct: 193 PLARSRMTESILPPPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSG 252 Query: 363 GVVLKKKENKFFTVEDVRDQWDEINDFTESRHP 461 GV+ K ++ FT E V ++ EI D+ +SR P Sbjct: 253 GVLFKPDQS--FTAEVVAKRFSEILDYDDSRKP 283
Score = 160 bits (404), Expect = 6e-39 Identities = 100/282 (35%), Positives = 151/282 (53%), Gaps = 1/282 (0%) Frame = +3 Query: 3 AWNYMRNQKFGRIIFTSSSSGIYGNFGQANYSAAKLGLVGLCNTLAIEGAKYNIKCNTIA 182 AW Y ++FGRII +S+SGIYGNFGQANYS++K G++GL T+AIEGAK NIK N +A Sbjct: 437 AWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVA 496 Query: 183 PVAGSRLTEDVFPPELYNAFKPEYVSPLVLYLCHPSNINSGNLFEVGAGWIGKVRWEVSR 362 P A + +T +F + N + + V+PL++YL +G FE+G GWIG RW+ ++ Sbjct: 497 PHAETAMTLTIFREQDKNLYHADQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTRWQRAK 556 Query: 363 GVVLKKKENKFFTVEDVRDQWDEINDF-TESRHPTSNKDSIQNFLEVXXXXXXXXXXXXX 539 G V ++ TVE +++ +EI DF T++ +P S +S L Sbjct: 557 GAV---SHDEHTTVEFIKEHLNEITDFTTDTENPKSTTESSMAILSAVGGDDDDDDEDEE 613 Query: 540 XXXXXXXXXXXXFIGKSKTSTYESISFQKAILYAISVGINNSKIENLKFLYENHSNFSVL 719 + + + ILY I++G + + LK++YEN S+F V+ Sbjct: 614 EDEGDEEEDEE---DEEEDDPVWRFDDRDVILYNIALG---ATTKQLKYVYENDSDFQVI 667 Query: 720 PTFAVIASFDNVFNMLNEVMSASDNAFDLSQVLHGEQYLEVY 845 PTF + +F N N N F+ +LHGE YL+V+ Sbjct: 668 PTFGHLITF-NSGKSQNSFAKLLRN-FNPMLLLHGEHYLKVH 707
>sp|P50203|PHAB_ACISR Acetoacetyl-CoA reductase Length = 248 Score = 65.5 bits (158), Expect = 2e-10 Identities = 32/60 (53%), Positives = 41/60 (68%) Frame = +3 Query: 6 WNYMRNQKFGRIIFTSSSSGIYGNFGQANYSAAKLGLVGLCNTLAIEGAKYNIKCNTIAP 185 +N M QK GRI+ SS +G+ G FGQANYSA+K G++G LA EGA+ NI N +AP Sbjct: 126 FNKMLEQKSGRIVNISSVNGLKGQFGQANYSASKAGIIGFTKALAQEGARSNICVNVVAP 185
>sp|Q93X68|FABG5_BRANA 3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplast precursor (3-ketoacyl-acyl carrier protein reductase 5) Length = 317 Score = 63.9 bits (154), Expect = 6e-10 Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 14/124 (11%) Frame = +3 Query: 3 AWNYMRNQKFGRIIFTSSSSGIYGNFGQANYSAAKLGLVGLCNTLAIEGAKYNIKCNTIA 182 A M ++ GRII +S G+ GN GQANY+AAK G++G T A EGA NI N + Sbjct: 194 ATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVC 253 Query: 183 P--VAG---SRLTEDV-------FPPELYNAFKPEYVSPLV--LYLCHPSNINSGNLFEV 320 P +A ++L ED+ P Y +PEYV+ LV L L S+ +G+ F + Sbjct: 254 PGFIASDMTAKLGEDMEKKILGTIPLGRYG--QPEYVAGLVEFLALSPASSYITGHTFSI 311 Query: 321 GAGW 332 G+ Sbjct: 312 HGGF 315
>sp|P45375|PHBB_CHRVI Acetoacetyl-CoA reductase Length = 246 Score = 60.8 bits (146), Expect = 5e-09 Identities = 32/60 (53%), Positives = 38/60 (63%) Frame = +3 Query: 6 WNYMRNQKFGRIIFTSSSSGIYGNFGQANYSAAKLGLVGLCNTLAIEGAKYNIKCNTIAP 185 W+ M + FGRII SS +G G FGQANYSAAK G+ G LA EGA + NTI+P Sbjct: 124 WDGMLERGFGRIINISSVNGQRGQFGQANYSAAKAGMHGFTMALAQEGASKGVTVNTISP 183
>sp|P73826|FABG2_SYNY3 3-oxoacyl-[acyl-carrier-protein] reductase 2 (3-ketoacyl-acyl carrier protein reductase 2) Length = 240 Score = 60.8 bits (146), Expect = 5e-09 Identities = 28/57 (49%), Positives = 38/57 (66%) Frame = +3 Query: 15 MRNQKFGRIIFTSSSSGIYGNFGQANYSAAKLGLVGLCNTLAIEGAKYNIKCNTIAP 185 M +K G I+ SS SG GN GQ NYSA K G++G+ +LA EGA+Y ++ N +AP Sbjct: 121 MYERKAGSIVAISSISGERGNVGQTNYSATKAGVIGMMKSLAREGARYGVRANAVAP 177
Database: Non-redundant SwissProt sequences Posted date: Dec 6, 2005 7:40 AM Number of letters in database: 68,354,980 Number of sequences in database: 184,735 Database: swissprot.01 Posted date: Dec 6, 2005 8:18 AM Number of letters in database: 66,202,850 Number of sequences in database: 184,431 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,698,313 Number of Sequences: 369166 Number of extensions: 1775689 Number of successful extensions: 4725 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4564 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4706 length of database: 68,354,980 effective HSP length: 110 effective length of database: 48,034,130 effective search space used: 8886314050 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)