Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_P08
(783 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P13797|PLST_HUMAN T-plastin (Plastin-3) 174 3e-43
sp|Q99K51|PLST_MOUSE T-plastin (Plastin-3) 172 1e-42
sp|O88818|PLST_CRIGR T-plastin (Plastin-3) 171 2e-42
sp|Q63598|PLST_RAT T-plastin (Plastin-3) 170 4e-42
sp|P13796|PLSL_HUMAN L-plastin (Lymphocyte cytosolic protei... 170 4e-42
sp|Q6P698|PLSL_BRARE L-plastin (Lymphocyte cytosolic plasti... 166 7e-41
sp|Q61233|PLSL_MOUSE L-plastin (Lymphocyte cytosolic protei... 165 1e-40
sp|Q14651|PLSI_HUMAN I-plastin (Intestine-specific plastin)... 163 4e-40
sp|Q9FKI0|FIMB2_ARATH Fimbrin-like protein 2 159 8e-39
sp|P54680|FIMB_DICDI Fimbrin 159 1e-38
>sp|P13797|PLST_HUMAN T-plastin (Plastin-3)
Length = 627
Score = 174 bits (440), Expect = 3e-43
Identities = 95/228 (41%), Positives = 144/228 (63%), Gaps = 8/228 (3%)
Frame = +3
Query: 63 YRNWINSQGILTHVNSFYYDTTDGLVFLYIFDKLNPGCVNWSKVVRN-FDSKRRLFQEQG 239
+RNW+NS G+ HVN Y D D LV L +++++ V+WSKV + + ++
Sbjct: 400 FRNWMNSLGVNPHVNHLYADLQDALVILQLYERIKVP-VDWSKVNKPPYPKLGANMKKLE 458
Query: 240 NCNEVIEAGKK-CNLKIQNMSGENIRNRDKVYILGLCFQMMRYNTIKVLEKLCGNGRKIE 416
NCN +E GK + + G+++ + ++ L L +Q+MR T+ VLE L G+G+K
Sbjct: 459 NCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQLMRRYTLNVLEDL-GDGQKAN 517
Query: 417 DKDILYWVNETLGKSGKTTRISSFKERNIATSLPVIDLIDAIKPGSINYNLICG------ 578
D I+ WVN TL ++GK+T I SFK++ I++SL V+DLIDAI+PG INY+L+
Sbjct: 518 DDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTED 577
Query: 579 DRHKDACYAVSMARKIGANAFVLPDHLTSLNQKMIMTLFASLMIVGLE 722
D+H +A YAVSMAR+IGA + LP+ L + KM+MT+FA LM G++
Sbjct: 578 DKHNNAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGRGMK 625
>sp|Q99K51|PLST_MOUSE T-plastin (Plastin-3)
Length = 627
Score = 172 bits (435), Expect = 1e-42
Identities = 94/228 (41%), Positives = 142/228 (62%), Gaps = 8/228 (3%)
Frame = +3
Query: 63 YRNWINSQGILTHVNSFYYDTTDGLVFLYIFDKLNPGCVNWSKVVRN-FDSKRRLFQEQG 239
+RNW+NS G+ HVN Y D D LV L +++++ V+WSKV + + ++
Sbjct: 400 FRNWMNSLGVNPHVNHLYADLQDALVILQLYERIKVP-VDWSKVNKPPYPKLGANMKKLE 458
Query: 240 NCNEVIEAGKK-CNLKIQNMSGENIRNRDKVYILGLCFQMMRYNTIKVLEKLCGNGRKIE 416
NCN +E GK + + G+++ + + L + +Q+MR T+ VLE L G G+K
Sbjct: 459 NCNYAVELGKNPAKFSLVGIGGQDLNDGNPTLTLAVVWQLMRRYTLNVLEDL-GEGQKAN 517
Query: 417 DKDILYWVNETLGKSGKTTRISSFKERNIATSLPVIDLIDAIKPGSINYNLICG------ 578
D I+ WVN TL ++GK+T I SFK++ I++SL V+DLIDAI+PG INY+L+
Sbjct: 518 DDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTED 577
Query: 579 DRHKDACYAVSMARKIGANAFVLPDHLTSLNQKMIMTLFASLMIVGLE 722
D+H +A YAVSMAR+IGA + LP+ L + KM+MT+FA LM G++
Sbjct: 578 DKHNNAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGRGMK 625
>sp|O88818|PLST_CRIGR T-plastin (Plastin-3)
Length = 627
Score = 171 bits (434), Expect = 2e-42
Identities = 94/228 (41%), Positives = 142/228 (62%), Gaps = 8/228 (3%)
Frame = +3
Query: 63 YRNWINSQGILTHVNSFYYDTTDGLVFLYIFDKLNPGCVNWSKVVRN-FDSKRRLFQEQG 239
+RNW+NS G+ HVN Y D D LV L +++++ V+WSKV + + ++
Sbjct: 400 FRNWMNSLGVNPHVNHLYADLQDALVILQLYERIKVP-VDWSKVNKPPYPKLGANMKKLE 458
Query: 240 NCNEVIEAGKK-CNLKIQNMSGENIRNRDKVYILGLCFQMMRYNTIKVLEKLCGNGRKIE 416
NCN +E GK + + G+++ + + L + +Q+MR T+ VLE L G G+K
Sbjct: 459 NCNYAVELGKHPAKFSLVGIGGQDLNDGNPTLTLAVVWQLMRRYTLNVLEDL-GEGQKAN 517
Query: 417 DKDILYWVNETLGKSGKTTRISSFKERNIATSLPVIDLIDAIKPGSINYNLICG------ 578
D I+ WVN TL ++GK+T I SFK++ I++SL V+DLIDAI+PG INY+L+
Sbjct: 518 DDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTED 577
Query: 579 DRHKDACYAVSMARKIGANAFVLPDHLTSLNQKMIMTLFASLMIVGLE 722
D+H +A YAVSMAR+IGA + LP+ L + KM+MT+FA LM G++
Sbjct: 578 DKHNNAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGRGMK 625
>sp|Q63598|PLST_RAT T-plastin (Plastin-3)
Length = 627
Score = 170 bits (431), Expect = 4e-42
Identities = 94/229 (41%), Positives = 143/229 (62%), Gaps = 8/229 (3%)
Frame = +3
Query: 63 YRNWINSQGILTHVNSFYYDTTDGLVFLYIFDKLNPGCVNWSKVVRN-FDSKRRLFQEQG 239
+RNW+NS G+ HVN Y D D LV L +++++ V+WSKV + + ++
Sbjct: 400 FRNWMNSLGVNPHVNHLYVDLQDALVILQLYERIKVP-VDWSKVNKPPYPKLGANMKKLE 458
Query: 240 NCNEVIEAGK-KCNLKIQNMSGENIRNRDKVYILGLCFQMMRYNTIKVLEKLCGNGRKIE 416
NCN +E GK + + + G+++ + + L + +Q+MR T+ V+E L G G+K
Sbjct: 459 NCNYAVELGKNQAKFSLVGIGGQDLNDGNPTLTLAVVWQLMRRYTLNVMEDL-GEGQKAT 517
Query: 417 DKDILYWVNETLGKSGKTTRISSFKERNIATSLPVIDLIDAIKPGSINY------NLICG 578
D I+ WVN TL ++GK+T I SFK++ I++SL V+DLIDAI+PG INY NL
Sbjct: 518 DDIIVNWVNGTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKTGNLTEE 577
Query: 579 DRHKDACYAVSMARKIGANAFVLPDHLTSLNQKMIMTLFASLMIVGLEN 725
D+H +A YAVSMAR+IGA + LP+ L + KM+MT+FA LM G+++
Sbjct: 578 DKHNNAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGRGMKS 626
>sp|P13796|PLSL_HUMAN L-plastin (Lymphocyte cytosolic protein 1) (LCP-1) (LC64P)
Length = 627
Score = 170 bits (431), Expect = 4e-42
Identities = 93/228 (40%), Positives = 145/228 (63%), Gaps = 8/228 (3%)
Frame = +3
Query: 63 YRNWINSQGILTHVNSFYYDTTDGLVFLYIFDKLNPGCVNWSKVVRN-FDSKRRLFQEQG 239
+RNW+NS G+ VN Y D +D LV +++K+ V+W++V + + ++
Sbjct: 400 FRNWMNSLGVNPRVNHLYSDLSDALVIFQLYEKIKVP-VDWNRVNKPPYPKLGGNMKKLE 458
Query: 240 NCNEVIEAGK-KCNLKIQNMSGENIRNRDKVYILGLCFQMMRYNTIKVLEKLCGNGRKIE 416
NCN +E GK + + + G+++ ++ L L +Q+MR T+ +LE++ G G+K+
Sbjct: 459 NCNYAVELGKNQAKFSLVGIGGQDLNEGNRTLTLALIWQLMRRYTLNILEEI-GGGQKVN 517
Query: 417 DKDILYWVNETLGKSGKTTRISSFKERNIATSLPVIDLIDAIKPGSINYNLICGDRHKD- 593
D I+ WVNETL ++ K++ ISSFK+ I+TSLPV+DLIDAI+PGSINY+L+ + D
Sbjct: 518 DDIIVNWVNETLREAEKSSSISSFKDPKISTSLPVLDLIDAIQPGSINYDLLKTENLNDD 577
Query: 594 -----ACYAVSMARKIGANAFVLPDHLTSLNQKMIMTLFASLMIVGLE 722
A YA+SMARKIGA + LP+ L +N KM+MT+FA LM G++
Sbjct: 578 EKLNNAKYAISMARKIGARVYALPEDLVEVNPKMVMTVFACLMGKGMK 625
>sp|Q6P698|PLSL_BRARE L-plastin (Lymphocyte cytosolic plastin 1)
Length = 624
Score = 166 bits (420), Expect = 7e-41
Identities = 94/227 (41%), Positives = 142/227 (62%), Gaps = 8/227 (3%)
Frame = +3
Query: 63 YRNWINSQGILTHVNSFYYDTTDGLVFLYIFDKLNPGCVNWSKVVRN-FDSKRRLFQEQG 239
+RNW+NS G+ VN Y D D LV +++K+ V+W KV + + ++
Sbjct: 398 FRNWMNSLGVNPRVNHLYVDLADALVIFQLYEKIKVP-VDWDKVNKPPYPKLGSNMKKLE 456
Query: 240 NCNEVIEAGKK-CNLKIQNMSGENIRNRDKVYILGLCFQMMRYNTIKVLEKLCGNGRKIE 416
NCN +E GKK + ++G+++ ++ L L +Q+MR T+ +LE L G+G+KI
Sbjct: 457 NCNYAVELGKKEAKFSLVGIAGQDLNEGNRTLTLALLWQLMRRYTLNILEDL-GDGQKII 515
Query: 417 DKDILYWVNETLGKSGKTTRISSFKERNIATSLPVIDLIDAIKPGSINYNLICGDRHKD- 593
D+ I+ WVNETL ++GK T IS FK+ +I++S+PV+DLIDAI+PGSI Y+L+ + D
Sbjct: 516 DETIVQWVNETLTQAGKGT-ISGFKDGSISSSMPVLDLIDAIQPGSIRYDLLKAEDLTDE 574
Query: 594 -----ACYAVSMARKIGANAFVLPDHLTSLNQKMIMTLFASLMIVGL 719
A YA+SMARKIGA + LP+ L + KM+MT+FA LM G+
Sbjct: 575 KKLNNAKYAISMARKIGARVYALPEDLVEVKPKMVMTVFACLMARGM 621
>sp|Q61233|PLSL_MOUSE L-plastin (Lymphocyte cytosolic protein 1) (LCP-1) (65 kDa macrophage
protein) (pp65)
Length = 627
Score = 165 bits (417), Expect = 1e-40
Identities = 91/228 (39%), Positives = 145/228 (63%), Gaps = 8/228 (3%)
Frame = +3
Query: 63 YRNWINSQGILTHVNSFYYDTTDGLVFLYIFDKLNPGCVNWSKVVRN-FDSKRRLFQEQG 239
+RNW+NS G+ VN Y D +D LV +++K+ V+W++V + + ++
Sbjct: 400 FRNWMNSLGVNPRVNHLYSDLSDALVIFQLYEKIKVP-VDWNRVNKPPYPKLGGNMKKLE 458
Query: 240 NCNEVIEAGK-KCNLKIQNMSGENIRNRDKVYILGLCFQMMRYNTIKVLEKLCGNGRKIE 416
NCN ++ GK + + ++G+++ ++ L L +Q+MR T+ +LE + G G+K+
Sbjct: 459 NCNYAVDLGKNQAKFSLVGIAGQDLNEGNRTLTLALVWQLMRRYTLNILEDI-GGGQKVN 517
Query: 417 DKDILYWVNETLGKSGKTTRISSFKERNIATSLPVIDLIDAIKPGSINYNLI----CGDR 584
D I+ WVN TL ++ K++ I+SFK+ I+TSLPV+DLIDAI+PGSINY+L+ D
Sbjct: 518 DDIIVNWVNTTLKEAQKSSSIASFKDPKISTSLPVLDLIDAIQPGSINYDLLKTENLDDE 577
Query: 585 HK--DACYAVSMARKIGANAFVLPDHLTSLNQKMIMTLFASLMIVGLE 722
K +A YA+SMARKIGA + LP+ L +N KM+MT+FA LM G++
Sbjct: 578 EKLNNAKYAISMARKIGARVYALPEDLVEVNPKMVMTVFACLMGKGMK 625
>sp|Q14651|PLSI_HUMAN I-plastin (Intestine-specific plastin) (Plastin-1)
Length = 629
Score = 163 bits (413), Expect = 4e-40
Identities = 92/227 (40%), Positives = 137/227 (60%), Gaps = 8/227 (3%)
Frame = +3
Query: 63 YRNWINSQGILTHVNSFYYDTTDGLVFLYIFDKLNPGCVNWSKVVRN-FDSKRRLFQEQG 239
+RNW+NS G+ ++N Y D D LV +++ + VNWS V + + + ++
Sbjct: 401 FRNWMNSLGVNPYINHLYSDLADALVIFQLYEMIRVP-VNWSHVNKPPYPALGGNMKKIE 459
Query: 240 NCNEVIEAGK-KCNLKIQNMSGENIRNRDKVYILGLCFQMMRYNTIKVLEKLCGNGRKIE 416
NCN +E GK K + ++G+++ R+ L L +Q+MR T+ VL L G G K+
Sbjct: 460 NCNYAVELGKNKAKFSLVGIAGQDLNERNSTLTLALVWQLMRRYTLNVLSDL-GEGEKVN 518
Query: 417 DKDILYWVNETLGKSGKTTRISSFKERNIATSLPVIDLIDAIKPGSINY------NLICG 578
D+ I+ WVN+TL + K T ISSFK+++I+TSLPV+DLIDAI P ++ NL
Sbjct: 519 DEIIIKWVNQTLKSANKKTSISSFKDKSISTSLPVLDLIDAIAPNAVRQEMIRRENLSDE 578
Query: 579 DRHKDACYAVSMARKIGANAFVLPDHLTSLNQKMIMTLFASLMIVGL 719
D+ +A YA+S+ARKIGA + LPD L + KM+MT+FA LM GL
Sbjct: 579 DKLNNAKYAISVARKIGARIYALPDDLVEVKPKMVMTVFACLMGKGL 625
>sp|Q9FKI0|FIMB2_ARATH Fimbrin-like protein 2
Length = 687
Score = 159 bits (402), Expect = 8e-39
Identities = 79/227 (34%), Positives = 141/227 (62%), Gaps = 7/227 (3%)
Frame = +3
Query: 63 YRNWINSQGILTHVNSFYYDTTDGLVFLYIFDKLNPGCVNWSKVVRNFDSKRRLFQEQGN 242
+R WINS G T+VN+ + D +G V L + DK++PG VNW N + F++ N
Sbjct: 398 FRLWINSLGTATYVNNVFEDLRNGWVLLEVLDKVSPGSVNWKHA--NKPPIKMPFKKVEN 455
Query: 243 CNEVIEAGKKCNLKIQNMSGENIRNRDKVYILGLCFQMMRYNTIKVLEKLCGN--GRKIE 416
CNEVI+ GK+ + N++G +I +K +L +Q+MRY +++L L + G++I
Sbjct: 456 CNEVIKIGKELRFSLVNVAGNDIVQGNKKLLLAFLWQLMRYTMLQLLRNLRSHSQGKEIT 515
Query: 417 DKDILYWVNETLGKSGKTTRISSFKERNIATSLPVIDLIDAIKPGSINYNLICG-----D 581
D DIL W N + + G+T++ SF+++N+++ + ++L+ A++P +N++L+ D
Sbjct: 516 DADILNWANRKVKRGGRTSQADSFRDKNLSSGMFFLELLSAVEPRVVNWSLVTNGETEED 575
Query: 582 RHKDACYAVSMARKIGANAFVLPDHLTSLNQKMIMTLFASLMIVGLE 722
+ +A Y +S+ARK+G + F+LP+ + +NQKM++ L AS+M L+
Sbjct: 576 KKLNATYIISVARKLGCSIFLLPEDIIEVNQKMMLILAASIMYWSLQ 622
Score = 30.8 bits (68), Expect = 4.4
Identities = 42/219 (19%), Positives = 91/219 (41%), Gaps = 22/219 (10%)
Frame = +3
Query: 105 NSFYYDTTDGLVFLYIFDKLNPGCVNWSKVVRNFDSKRRL--FQEQGNCNEVIEAGKKCN 278
N+F+ DG++ + + PG ++ R ++K+ L ++ N + + K
Sbjct: 153 NAFFDLVKDGVLLCKLINVAVPGTID----ERAINTKKTLNPWERNENLTLGLNSAKAIG 208
Query: 279 LKIQNMSGENIRNRDKVYILGLCFQMMRYNTIKVLE--------KLCGNGRKIED----- 419
+ N+ ++I +LGL Q+++ + L +L + + E+
Sbjct: 209 CTVVNIGTQDIAEGRPYLVLGLISQIIKIQMLADLNFKKTPSLFQLVDDTQDAEELMGLA 268
Query: 420 --KDILYWVNETLGKSGKTTRISSFKERNIATSLPVIDLIDAIKP-GSINYNLICGDRHK 590
K +L W+N L K+G ++++F ++ L++A+ P S + L D +
Sbjct: 269 PEKVLLKWMNFHLKKAGYEKQVTNFSS-DLKDGEAYAYLLNALAPEHSTHVALETKDPTE 327
Query: 591 DACYAVSMARKIGANAFVLP----DHLTSLNQKMIMTLF 695
A + A K+ ++ P D +LN + +F
Sbjct: 328 RAKKVLEQAEKLDCKRYLSPKDIVDGSANLNLAFVAQIF 366
>sp|P54680|FIMB_DICDI Fimbrin
Length = 610
Score = 159 bits (401), Expect = 1e-38
Identities = 85/222 (38%), Positives = 134/222 (60%), Gaps = 8/222 (3%)
Frame = +3
Query: 63 YRNWINSQGILTHVNSFYYDTTDGLVFLYIFDKLNPGCVNWSKVVRNFDSKRRLFQEQG- 239
+RNW+NS G+ VN+ Y T DGL+ + +FDK+ PG V+ KV N+ + + E
Sbjct: 385 FRNWMNSLGVDPFVNNLYEGTYDGLILIQLFDKIYPGLVDHKKV--NYPPYKAMGAEMKK 442
Query: 240 --NCNEVIEAGKKCNLKIQNMSGENIRNRDKVYILGLCFQMMRYNTIKVLEKLCGNGRKI 413
NCN I+ GK C + + G+N+ +++K L + +Q+MR + I +L L G+G+ I
Sbjct: 443 IENCNYAIQLGKDCKYSLVGIDGKNVYDKNKTLTLSILWQLMRGHVISILTALSGSGKPI 502
Query: 414 EDKDILYWVNETLGKSGKTTRISSFKERNIATSLPVIDLIDAIKPGSINYNLI-----CG 578
D DI+ N L +GK +IS FK+ I+T +P++D+I+A++PGS++ L+
Sbjct: 503 ADADIVNVANSKLSAAGK-KQISGFKDSTISTGIPILDVIEAVRPGSVDPALVATSGSAE 561
Query: 579 DRHKDACYAVSMARKIGANAFVLPDHLTSLNQKMIMTLFASL 704
D +A AVS ARK+GA F LP+ + + KM++TLFASL
Sbjct: 562 DNLLNAKLAVSTARKVGAVVFALPEDIVEVKPKMVLTLFASL 603
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,374,486
Number of Sequences: 369166
Number of extensions: 1735587
Number of successful extensions: 4272
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4225
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7357347200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)