Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_P05
(844 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P15305|DYHC_ONCMY Dynein heavy chain (DYHC) 60 1e-08
sp|P34849|NU2M_APILI NADH-ubiquinone oxidoreductase chain 2... 58 4e-08
sp|P15605|YM04_PARTE Hypothetical 18.8 kDa protein (ORF4) 48 4e-05
sp|P39854|CAPE_STAAU Protein capE 47 7e-05
sp|O74486|WTF19_SCHPO Hypothetical protein wtf19 46 1e-04
sp|Q03376|BAR3_CHITE Balbiani ring protein 3 precursor 45 2e-04
sp|P04540|NU5M_TRYBB NADH-ubiquinone oxidoreductase chain 5... 45 2e-04
sp|O74420|WTF13_SCHPO Hypothetical protein wtf13 44 7e-04
sp|P47179|DAN4_YEAST Cell wall protein DAN4 precursor 43 0.001
sp|P24499|ATP6_TRYBB ATP synthase a chain (ATPase protein 6) 43 0.001
>sp|P15305|DYHC_ONCMY Dynein heavy chain (DYHC)
Length = 515
Score = 59.7 bits (143), Expect = 1e-08
Identities = 49/273 (17%), Positives = 132/273 (48%), Gaps = 19/273 (6%)
Frame = +1
Query: 25 VKISSLFLSQITVHI---SLFLSQITVHISLFLSQITVNISSLFLSQITVHI---SLFLS 186
++ S L + Q ++H+ S+ + Q ++H+ + + S L + Q ++H+ S+ +
Sbjct: 244 IQYSILHVIQYSIHVIQYSIHVIQYSIHVIQYSILHVIQYSILHVIQYSIHVIQYSIHVI 303
Query: 187 QITVHISLFLSQITVKISSLFLSQITVHI---SLLLSQITVNISSLFLSQITVNISSLFL 357
Q ++H+ ++ S L + Q ++H+ S+ + Q ++++ + I +I +
Sbjct: 304 QYSIHV--------IQYSILHVIQYSIHVIQYSIHVIQYSIHVIQYSIHVIQYSIHVIQY 355
Query: 358 SQITVNISSLFLSQITVNIS--SLFLSQITVHISLFLSQITVKISSLFLSQITVHISLFL 531
S + V S+ + Q ++++ S+ + Q ++H+ + ++ S L + Q ++H+ +
Sbjct: 356 SILHVIQYSIHVIQYSIHVIQYSIHVIQYSIHVIQYSILHVIQYSILHVIQYSIHVIQYS 415
Query: 532 SQITVHISLFLSQITVHI----SLFLSQITVHISLFLSQITVHISLFLSQITVHISLLLS 699
+ S+ + Q ++H+ L + Q ++H+ + + S+ + Q ++H+
Sbjct: 416 ILHVIQYSIHVIQYSIHVIQYSILHVIQYSIHVIQYSILHVIQYSIHVIQYSIHV----- 470
Query: 700 QITVNISSLFLSQITVHI----SLFLSQITVHI 786
+ S L + Q ++H+ L + Q ++H+
Sbjct: 471 ---IQYSILHVIQYSIHVIQYSILHVIQYSIHV 500
Score = 52.8 bits (125), Expect = 1e-06
Identities = 53/274 (19%), Positives = 136/274 (49%), Gaps = 20/274 (7%)
Frame = +1
Query: 25 VKISSLFLSQI-TVHISLFLSQITVHISLFLSQITVNISSLFLSQI-TVHIS----LFLS 186
++ S+L + Q T+H+ + T+H+ + + + S+L + Q T+H+ L +
Sbjct: 43 IQYSTLHVIQYSTLHV---IQYSTLHVIQYSTLNVIQYSTLHVIQYSTLHVIQYSILHVI 99
Query: 187 QITVHISLFLSQITVKISSLFLSQITVHI---SLLLSQITVNISSLFLSQITVNISSLFL 357
Q ++H+ + +T + S L + Q ++H+ S+ + Q + ++ + I +I +
Sbjct: 100 QYSIHVIQYSIHVT-QYSILHVIQYSIHVIQYSIHVIQYSTHVIQYSIHVIQYSIHVIQY 158
Query: 358 SQITVNISSLFLSQITVNIS--SLFLSQITVHISLFLSQITVKISSLFLSQITVHISLFL 531
S + V S+ + Q ++++ S + Q ++H+ + ++ S L + Q ++ L +
Sbjct: 159 SILHVIQYSIHVIQYSIHVIQYSTHVIQYSIHVIQYSILHVIQYSILHVIQYSI---LHV 215
Query: 532 SQITVHI---SLFLSQITVHISLFLSQITVHISLFLSQITVHI---SLFLSQITVHISLL 693
Q ++H+ S+ + Q ++H+ + + + L + Q ++H+ S+ + Q ++H+
Sbjct: 216 IQYSIHVIQYSIHVIQYSIHVIQYSIHVIQYSILHVIQYSIHVIQYSIHVIQYSIHVIQY 275
Query: 694 LSQITVNISSLFLSQITVHI---SLFLSQITVHI 786
+ S L + Q ++H+ S+ + Q ++H+
Sbjct: 276 SILHVIQYSILHVIQYSIHVIQYSIHVIQYSIHV 309
Score = 45.8 bits (107), Expect = 1e-04
Identities = 44/271 (16%), Positives = 125/271 (46%), Gaps = 6/271 (2%)
Frame = +1
Query: 25 VKISSLFLSQITVHISLFLSQITVHISLFLSQITVNISSLFLSQITVHISLFLSQITVHI 204
++ S L + Q ++ L + Q ++H+ + S+ + Q ++H+ + + +
Sbjct: 200 IQYSILHVIQYSI---LHVIQYSIHVIQY---------SIHVIQYSIHVIQYSIHVIQYS 247
Query: 205 SLFLSQITVKI--SSLFLSQITVHISLLLSQITVNISSLFLSQITVNISSLFLSQITVNI 378
L + Q ++ + S+ + Q ++H+ + S L + Q ++++ + I +I
Sbjct: 248 ILHVIQYSIHVIQYSIHVIQYSIHVIQYSILHVIQYSILHVIQYSIHVIQYSIHVIQYSI 307
Query: 379 SSLFLSQITVNISSLFLSQITVHISLFLSQITVKISSLFLSQITVHISLFLSQITVHISL 558
+ S + V S+ + Q ++H+ + I V S+ + Q ++H+ + + S+
Sbjct: 308 HVIQYSILHVIQYSIHVIQYSIHVIQY--SIHVIQYSIHVIQYSIHVIQYSILHVIQYSI 365
Query: 559 FLSQITVHI---SLFLSQITVHISLF-LSQITVHISLFLSQITVHISLLLSQITVNISSL 726
+ Q ++H+ S+ + Q ++H+ + + + + L + Q ++H+ + S L
Sbjct: 366 HVIQYSIHVIQYSIHVIQYSIHVIQYSILHVIQYSILHVIQYSIHV--------IQYSIL 417
Query: 727 FLSQITVHISLFLSQITVHISLFLSQITVNI 819
+ Q ++H+ + + + L + Q ++++
Sbjct: 418 HVIQYSIHVIQYSIHVIQYSILHVIQYSIHV 448
Score = 40.8 bits (94), Expect = 0.005
Identities = 48/250 (19%), Positives = 112/250 (44%), Gaps = 7/250 (2%)
Frame = +1
Query: 58 TVHISLFLSQITVHISLFLSQITVNISSLFLSQITVHISLFLSQITVHISLFLSQITVKI 237
TV +LF + + S S + +SS+ Q ++H+ + T+H+ + + ++
Sbjct: 7 TVPSTLFSTVPSTLFSTVPSTLFSTVSSVI--QYSIHV---IQYSTLHVIQYSTLHVIQY 61
Query: 238 SSLFLSQI-TVHISLLLSQITVNISSLFLSQITVNISSLFLSQITVNISSLFLSQITVNI 414
S+L + Q T+++ + + S+L + Q ++ L I +I + S
Sbjct: 62 STLHVIQYSTLNVIQYSTLHVIQYSTLHVIQYSI------LHVIQYSIHVIQYSIHVTQY 115
Query: 415 SSLFLSQITVHISLFLSQITVKISSLFLSQITVHISLFLSQITVHISLFLSQITVHISLF 594
S L + Q ++H+ I I + S + S+ + Q ++H+ + + S+
Sbjct: 116 SILHVIQYSIHV------IQYSIHVIQYSTHVIQYSIHVIQYSIHVIQYSILHVIQYSIH 169
Query: 595 LSQITVHI---SLFLSQITVHISLFLSQITVHISLLLSQITVNISSLFLSQITVHI---S 756
+ Q ++H+ S + Q ++H+ + + S+L + S L + Q ++H+ S
Sbjct: 170 VIQYSIHVIQYSTHVIQYSIHVIQYSILHVIQYSIL---HVIQYSILHVIQYSIHVIQYS 226
Query: 757 LFLSQITVHI 786
+ + Q ++H+
Sbjct: 227 IHVIQYSIHV 236
Score = 40.8 bits (94), Expect = 0.005
Identities = 42/210 (20%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Frame = +1
Query: 238 SSLFLSQITVHISLLLSQITVNISSLFLSQI-TVNISSLFLSQIT----VNISSLFLSQI 402
S+LF + + S + S + +SS+ I + S+L + Q + + S+L + Q
Sbjct: 10 STLFSTVPSTLFSTVPSTLFSTVSSVIQYSIHVIQYSTLHVIQYSTLHVIQYSTLHVIQY 69
Query: 403 -TVNISSLFLSQITVHISLFLSQITVKISSLFLSQITVHISLFLSQITVHISLFLSQITV 579
T+N+ + T+H+ + + ++ S L + Q ++H+ + +T + L + Q ++
Sbjct: 70 STLNV----IQYSTLHVIQYSTLHVIQYSILHVIQYSIHVIQYSIHVTQYSILHVIQYSI 125
Query: 580 HISLFLSQITVHISLFLSQITVHISLFLSQITVHISLLLSQITVNISSLFLSQITVHI-- 753
H+ Q ++H+ + + + + S+ + Q ++H+ + S + V S+ + Q ++H+
Sbjct: 126 HV----IQYSIHVIQYSTHV-IQYSIHVIQYSIHV-IQYSILHVIQYSIHVIQYSIHVIQ 179
Query: 754 -SLFLSQITVHISLFLSQITVNISSLFLSQ 840
S + Q ++H+ + + S L + Q
Sbjct: 180 YSTHVIQYSIHVIQYSILHVIQYSILHVIQ 209
>sp|P34849|NU2M_APILI NADH-ubiquinone oxidoreductase chain 2 (NADH dehydrogenase subunit
2)
Length = 333
Score = 57.8 bits (138), Expect = 4e-08
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 23/199 (11%)
Frame = +3
Query: 99 YFFILVTNYGKYFFFILVTN------YGTYFFILV------TNYGTYFFILVTNYGKNFF 242
Y + +T + + L+TN Y F+ L T + +++FI + KN F
Sbjct: 135 YMMVSMTKINSWTLYFLITNSLYISFYANKFYTLKKLLACSTIFNSFYFIFILELNKNMF 194
Query: 243 FILVTNYGTYFFIIVTNYGKY----FFFILVTNYGKYFFFILVTNYGKY-FFFILVTNYG 407
++ Y +F++++ K+ F F+ Y Y F L+ NY Y F V +
Sbjct: 195 IAMIILYSFNYFLLISFLNKFNIQNFNFMFYNKYQMYTFLTLMFNYSMYPIFLSFVIKWN 254
Query: 408 KYFFFILVTNYGTYFFILVTNYGKNFFFILVTNYGTYF---FILVTNYGTYFFILVTN-- 572
F + V Y F+L+ + +++ NY F+ + Y F N
Sbjct: 255 LIFMMVSVKAYNWILFLLMIS-----SMLMIWNYIIILKRVFLKMNFYKNNFIDDKDNKY 309
Query: 573 -YGTYFFILVTNYGTYFFI 626
Y +YF + + ++ FFI
Sbjct: 310 MYHSYFALTLLSFNISFFI 328
Score = 49.3 bits (116), Expect = 1e-05
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 17/191 (8%)
Frame = +3
Query: 39 FILVTN------YGTYFFILV------TNYGTYFFILVTNYGKYFFFILVTNYGTYFFIL 182
+ L+TN Y F+ L T + +++FI + K F ++ Y +F+L
Sbjct: 149 YFLITNSLYISFYANKFYTLKKLLACSTIFNSFYFIFILELNKNMFIAMIILYSFNYFLL 208
Query: 183 VTNYGTYFFILVTNYGKNFFFILVTNYGTYFFI-IVTNYGKY-FFFILVTNYGKYFFFIL 356
++ + +NF F+ Y Y F+ ++ NY Y F V + F +
Sbjct: 209 ISFLNKFNI-------QNFNFMFYNKYQMYTFLTLMFNYSMYPIFLSFVIKWNLIFMMVS 261
Query: 357 VTNYGKYFFFILVTNYGKYFFFILVTNYGTYFFILVTNYGKNFFFILVTN---YGTYFFI 527
V Y F +++++ + +I++ L N+ KN F N Y +YF +
Sbjct: 262 VKAYNWILFLLMISSMLMIWNYIIILKR----VFLKMNFYKNNFIDDKDNKYMYHSYFAL 317
Query: 528 LVTNYGTYFFI 560
+ ++ FFI
Sbjct: 318 TLLSFNISFFI 328
Score = 48.1 bits (113), Expect = 3e-05
Identities = 52/258 (20%), Positives = 102/258 (39%), Gaps = 24/258 (9%)
Frame = +3
Query: 141 FILVTNYGTYFFILVTNYGTYFFILVTNYGKNFFFILVTNYGTYFFIIVTNYGKYFFFIL 320
F + Y + + L+T F+L+ N F ++ +GT I + N I
Sbjct: 2 FFMNFKYHWFIYFLIT-----IFVLMMNSNNIFIQWMLMEFGTIISISLIN-------IK 49
Query: 321 VTNYGKYFFFILVTNYGKYFFFILVTNYGKYFFFILVTNYGTYFFILVTNYGKNFFFILV 500
TN + V+ F F ++ Y F T T+ F++ + FF+ +
Sbjct: 50 STNKTPSLIYYSVSVISSIFLFFMIIVYLSSISF---TKTDTFNFMV-----QMMFFLKI 101
Query: 501 TNYGTYFFILVT----NYGTYFFI--LVTNYGTYFFILVTNYGTY-FFILVTN------Y 641
+ +F+++ + N+ F + L+ Y + +T ++ + L+TN Y
Sbjct: 102 GTFPFHFWMIYSYEMMNWKQIFLMSTLIKFIPIYMMVSMTKINSWTLYFLITNSLYISFY 161
Query: 642 GTYFFILV------TNYGTYFFIIVTNYGKYFFFILVTNYGTYFFILVT-----NYGTYF 788
F+ L T + +++FI + K F ++ Y +F+L++ N +
Sbjct: 162 ANKFYTLKKLLACSTIFNSFYFIFILELNKNMFIAMIILYSFNYFLLISFLNKFNIQNFN 221
Query: 789 FILVTNYGKYFFFILVTN 842
F+ Y Y F L+ N
Sbjct: 222 FMFYNKYQMYTFLTLMFN 239
Score = 39.3 bits (90), Expect = 0.014
Identities = 37/173 (21%), Positives = 65/173 (37%), Gaps = 8/173 (4%)
Frame = +3
Query: 3 FILVTNYGKNFFFILVTNYGTYFFILVT-----NYGTYFFILVTNYGKYFFFILVTNYGT 167
FI + KN F ++ Y +F+L++ N + F+ Y Y F L+ NY
Sbjct: 183 FIFILELNKNMFIAMIILYSFNYFLLISFLNKFNIQNFNFMFYNKYQMYTFLTLMFNYSM 242
Query: 168 YFFILVTNYGTYFFILVTNYGKNFFFILVTNYGTYFFIIVTNYGKYFFFILVTNYGKYFF 347
Y F V + F + V Y F+++ + +++ NY
Sbjct: 243 Y---------PIFLSFVIKWNLIFMMVSVKAYNWILFLLMIS-----SMLMIWNY----I 284
Query: 348 FILVTNYGKYFFF---ILVTNYGKYFFFILVTNYGTYFFILVTNYGKNFFFIL 497
IL + K F+ + KY Y +YF + + ++ +FF L
Sbjct: 285 IILKRVFLKMNFYKNNFIDDKDNKYM-------YHSYFALTLLSFNISFFITL 330
>sp|P15605|YM04_PARTE Hypothetical 18.8 kDa protein (ORF4)
Length = 156
Score = 47.8 bits (112), Expect = 4e-05
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Frame = +3
Query: 72 FILVTNYGTYFFILVTNYGKYFFFILVTNYGTYFFILVTNYGTYFFILVTNYGK----NF 239
F+L + TYF T++ F + V Y + + + T+F + K F
Sbjct: 2 FLLYSIMNTYFLFGTTDWATLNFLVSVCLDNDYLYNKNSLFFTFFIFFLAAVFKLGLPPF 61
Query: 240 FFILVTNYGTYFFIIVTNYGKYFFFILVTNYGKYFFFILVTNYGKYFFFILVTNYGKYFF 419
FF + Y + Y +FFF ++ + + FF+ T++ YF ++L FF
Sbjct: 62 FFFKIEVYKGLPLFVTFFYSVFFFFNYLSGFF-FLFFVFFTSFFVYFSYLL-------FF 113
Query: 420 FILVTNYGTYFFILVTNYGK-NFFFILVTNYGTYFFI 527
F+ V + +FF +T Y N FF + + + F +
Sbjct: 114 FVPV--FVLFFFFYLTTYDNLNCFFSISSVINSTFLV 148
Score = 43.1 bits (100), Expect = 0.001
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Frame = +3
Query: 489 FILVTNYGTYFFILVTNYGTYFFIL--------VTNYGTYFFILVTNYGTYFFILVTNYG 644
F+L + TYF T++ T F++ + N + FF + +F V G
Sbjct: 2 FLLYSIMNTYFLFGTTDWATLNFLVSVCLDNDYLYNKNSLFF----TFFIFFLAAVFKLG 57
Query: 645 T--YFFILVTNYGTYFFIIVTNYGKYFFFILVTNYGTYFFILVTNYGTYF----FILVTN 806
+FF + Y + Y +FFF ++ + FF+ T++ YF F V
Sbjct: 58 LPPFFFFKIEVYKGLPLFVTFFYSVFFFFNYLSGFFFLFFVFFTSFFVYFSYLLFFFVPV 117
Query: 807 YGKYFFFILVT 839
+ +FFF L T
Sbjct: 118 FVLFFFFYLTT 128
Score = 42.7 bits (99), Expect = 0.001
Identities = 46/192 (23%), Positives = 73/192 (38%), Gaps = 2/192 (1%)
Frame = +3
Query: 174 FILVTNYGTYFFILVTNYGKNFFFILVTNYGTYFFIIVTNYGKYFFFILVTNYGKYFFFI 353
F+L + TYF T++ F + V Y + N FF + FF
Sbjct: 2 FLLYSIMNTYFLFGTTDWATLNFLVSVCLDNDYLY----NKNSLFFTFFI------FFLA 51
Query: 354 LVTNYG--KYFFFILVTNYGKYFFFILVTNYGTYFFILVTNYGKNFFFILVTNYGTYFFI 527
V G +FFF + G F Y +FF NY FFF+ FF+
Sbjct: 52 AVFKLGLPPFFFFKIEVYKGLPLFVTFF--YSVFFFF---NYLSGFFFL--------FFV 98
Query: 528 LVTNYGTYFFILVTNYGTYFFILVTNYGTYFFILVTNYGTYFFILVTNYGTYFFIIVTNY 707
T++ YF +Y +FF+ V + +FF +T Y N +F I
Sbjct: 99 FFTSFFVYF-----SYLLFFFVPV--FVLFFFFYLTTY--------DNLNCFFSISSVIN 143
Query: 708 GKYFFFILVTNY 743
+ ++L +++
Sbjct: 144 STFLVYLLASSF 155
Score = 42.4 bits (98), Expect = 0.002
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 2/184 (1%)
Frame = +3
Query: 243 FILVTNYGTYFFIIVTNYGKYFFFILVTNYGKYFFFILVTNYGKYFFFILVTNYGKYFFF 422
F+L + TYF T++ F + V Y + N FF + FF
Sbjct: 2 FLLYSIMNTYFLFGTTDWATLNFLVSVCLDNDYLY-----NKNSLFFTFFI------FFL 50
Query: 423 ILVTNYGT--YFFILVTNYGKNFFFILVTNYGTYFFILVTNYGTYFFILVTNYGTYFFIL 596
V G +FF + Y K + Y +FF NY + FF L FF+
Sbjct: 51 AAVFKLGLPPFFFFKIEVY-KGLPLFVTFFYSVFFFF---NYLSGFFFL-------FFVF 99
Query: 597 VTNYGTYFFILVTNYGTYFFILVTNYGTYFFIIVTNYGKYFFFILVTNYGTYFFILVTNY 776
T++ YF +Y +FF+ V + +FF +T Y F +++ F++
Sbjct: 100 FTSFFVYF-----SYLLFFFVPV--FVLFFFFYLTTYDNLNCFFSISSVINSTFLVYLLA 152
Query: 777 GTYF 788
++F
Sbjct: 153 SSFF 156
Score = 38.5 bits (88), Expect = 0.023
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Frame = +3
Query: 33 FFFILVTNYGT--YFFILVTNYGTYFFILVTNYGKYFFFILVTNYGTYFFILVTNYGTYF 206
FF V G +FF + Y + Y +FFF ++ + FF+ T++ YF
Sbjct: 48 FFLAAVFKLGLPPFFFFKIEVYKGLPLFVTFFYSVFFFFNYLSGFFFLFFVFFTSFFVYF 107
Query: 207 FILVTNYGKNFFFILVTNYGTYFFIIVTNYGKY--FFFILVTNYGKYFFFILVTNY 368
L+ FFF+ V + +FF +T Y FF I + ++L +++
Sbjct: 108 SYLL------FFFVPV--FVLFFFFYLTTYDNLNCFFSISSVINSTFLVYLLASSF 155
Score = 32.0 bits (71), Expect = 2.2
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +3
Query: 21 YGKNFFFILVTNYGTYFFILVTNYGTYF----FILVTNYGKYFFFILVT--NYGTYFFIL 182
Y FFF ++ + FF+ T++ YF F V + +FFF L T N +F I
Sbjct: 80 YSVFFFFNYLSGFFFLFFVFFTSFFVYFSYLLFFFVPVFVLFFFFYLTTYDNLNCFFSIS 139
Query: 183 VTNYGTYFFILVTN 224
T+ L+ +
Sbjct: 140 SVINSTFLVYLLAS 153
>sp|P39854|CAPE_STAAU Protein capE
Length = 440
Score = 47.0 bits (110), Expect = 7e-05
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 10/235 (4%)
Frame = +3
Query: 21 YGKNFFFILVTNYGTYFFILVTNYGTYFFILVTNYGKYFFFILVTNYG--TYFFILVTNY 194
Y K F+LV Y Y F+ TN+G + VTN + LV +G ++++I +N
Sbjct: 52 YKKRKGFLLV--YLIYLFL--TNFGVF----VTNI--FLANPLVEYHGDLSWYYINTSNL 101
Query: 195 GTY--FFILVTNYGKNFFFILVTNYGTYFFIIVTNYGKYFFF---ILVTNYGKYFFFILV 359
+ F IL NF + + F I + F++ + + + F F ++
Sbjct: 102 FSIATFAILTFTILSNFISVFSKINPSRKFDIKSKGNNLFYYTGILFIIGFTIQFLFYII 161
Query: 360 TNYGKYFFFILVTNYGKYFFFIL---VTNYGTYFFILVTNYGKNFFFILVTNYGTYFFIL 530
T + + YG Y I + YG +FF + G F F V + ++
Sbjct: 162 TGR------LAINTYGDYVSSIQELPMYTYGIFFFSI----GIAFAFSNVKKTHIKYLVI 211
Query: 531 VTNYGTYFFILVTNYGTYFFILVTNYGTYFFILVTNYGTYFFILVTNYGTYFFII 695
+ FF++ N G F+ +++ G ++V NY +++++T T FF+I
Sbjct: 212 ILTPQVLFFLITGNRGEVFYPILSALGV---LIVRNYKIKWWMIITIVFTLFFVI 263
Score = 44.3 bits (103), Expect = 4e-04
Identities = 62/281 (22%), Positives = 114/281 (40%), Gaps = 37/281 (13%)
Frame = +3
Query: 66 YFFILVTNYGTYFFILVTNYGKYFFFILVTNYGTYFFILVTNYGTYFFILVTNYGKNFFF 245
Y IL+ N+ T F + T G + N + + ++ T + Y K F
Sbjct: 5 YKVILIINFVTVLFSIFTFIG------YLNNLIGFRVVTISLCITIAMTVYLLYKKRKGF 58
Query: 246 ILVTNYGTYFFIIVTNYGKYFFFILVTN-----YGKY-FFFILVTNYGKYFFFILVTNYG 407
+LV Y Y F+ TN+G + I + N +G +++I +N F ++T
Sbjct: 59 LLV--YLIYLFL--TNFGVFVTNIFLANPLVEYHGDLSWYYINTSNLFSIATFAILT--- 111
Query: 408 KYFFFILVTNYGTYFFIL-------VTNYGKNFFFILVTNYGTYFFILVTNYGTYFFIL- 563
F +++N+ + F + + + G N F+ Y FI+ F+I+
Sbjct: 112 ----FTILSNFISVFSKINPSRKFDIKSKGNNLFY-----YTGILFIIGFTIQFLFYIIT 162
Query: 564 ----VTNYGTYFFIL----VTNYGTYFFIL--------VTNYGTYFFILVTNYGTYFFII 695
+ YG Y + + YG +FF + V + +++ FF+I
Sbjct: 163 GRLAINTYGDYVSSIQELPMYTYGIFFFSIGIAFAFSNVKKTHIKYLVIILTPQVLFFLI 222
Query: 696 VTNYGKYFFFIL-------VTNYGTYFFILVTNYGTYFFIL 797
N G+ F+ IL V NY +++++T T FF++
Sbjct: 223 TGNRGEVFYPILSALGVLIVRNYKIKWWMIITIVFTLFFVI 263
>sp|O74486|WTF19_SCHPO Hypothetical protein wtf19
Length = 393
Score = 46.2 bits (108), Expect = 1e-04
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 503 KLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYI 682
K+ IFL C K+ +FL C K+ I L C KL +FL C K+ +FL C K+ I
Sbjct: 166 KVTVIFLAQCIKVTVVFLAQCVKVTSISLAKCVKLTAVFLAQCVKVTAVFLAQCVKVISI 225
Query: 683 FLY 691
L+
Sbjct: 226 GLF 228
Score = 45.1 bits (105), Expect = 3e-04
Identities = 29/90 (32%), Positives = 44/90 (48%)
Frame = +2
Query: 536 KLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYYCHKLR*I 715
K+ IFL C K+ +FL C K+ I L C KL +FL C K+ +FL C K+ I
Sbjct: 166 KVTVIFLAQCIKVTVVFLAQCVKVTSISLAKCVKLTAVFLAQCVKVTAVFLAQCVKVISI 225
Query: 716 FLLYSCHKLRYIFLYSCHKLRYIFLYSCHK 805
L++ + I ++ + L+ C K
Sbjct: 226 G-LFNIRREMMIIIWLLWLIICCILFGCVK 254
Score = 42.7 bits (99), Expect = 0.001
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +2
Query: 488 LYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCH 667
L C K+ +FL C K+ I L C KL +FL C K+ +FL C K+ I L++
Sbjct: 172 LAQCIKVTVVFLAQCVKVTSISLAKCVKLTAVFLAQCVKVTAVFLAQCVKVISIGLFNIR 231
Query: 668 KLRYIFLY 691
+ I ++
Sbjct: 232 REMMIIIW 239
Score = 42.4 bits (98), Expect = 0.002
Identities = 29/90 (32%), Positives = 43/90 (47%)
Frame = +2
Query: 434 KLRYIFLYSCHKLR*KFLLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRY 613
K+ IFL C K+ FL C K+ I L C KL +FL C K+ +FL C K+
Sbjct: 166 KVTVIFLAQCIKVTVVFLA-QCVKVTSISLAKCVKLTAVFLAQCVKVTAVFLAQCVKVIS 224
Query: 614 IFLYSCHKLRYIFLYSCHKLRYIFLYYCHK 703
I L++ + I ++ + L+ C K
Sbjct: 225 IGLFNIRREMMIIIWLLWLIICCILFGCVK 254
Score = 40.0 bits (92), Expect = 0.008
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +2
Query: 53 KLRYIFLYSCHKLRYIFLYSCHKLR*IFLLYSCHKLRYIFLYSCHKLRYIFLYSCHKL 226
K+ IFL C K+ +FL C K+ I L C KL +FL C K+ +FL C K+
Sbjct: 166 KVTVIFLAQCIKVTVVFLAQCVKVTSISLA-KCVKLTAVFLAQCVKVTAVFLAQCVKV 222
Score = 39.7 bits (91), Expect = 0.011
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +2
Query: 635 KLRYIFLYSCHKLRYIFLYYCHKLR*IFLLYSCHKLRYIFLYSCHKLRYIFLYSCHKL 808
K+ IFL C K+ +FL C K+ I L C KL +FL C K+ +FL C K+
Sbjct: 166 KVTVIFLAQCIKVTVVFLAQCVKVTSISLA-KCVKLTAVFLAQCVKVTAVFLAQCVKV 222
Score = 36.6 bits (83), Expect = 0.089
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +2
Query: 38 LYSCHKLRYIFLYSCHKLRYIFLYSCHKLR*IFLLYSCHKLRYIFLYSCHKLRYIFLYSC 217
L C K+ +FL C K+ I L C KL +FL C K+ +FL C K+ I L++
Sbjct: 172 LAQCIKVTVVFLAQCVKVTSISLAKCVKLTAVFLA-QCVKVTAVFLAQCVKVISIGLFNI 230
Query: 218 HK 223
+
Sbjct: 231 RR 232
Score = 34.7 bits (78), Expect = 0.34
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 155 KLRYIFLYSCHKLRYIFLYSCHKLR*KFLLYSCHKLRYIFLYYCHKLR*IFL 310
K+ IFL C K+ +FL C K+ L C KL +FL C K+ +FL
Sbjct: 166 KVTVIFLAQCIKVTVVFLAQCVKVT-SISLAKCVKLTAVFLAQCVKVTAVFL 216
Score = 34.7 bits (78), Expect = 0.34
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +2
Query: 668 KLRYIFLYYCHKLR*IFLLYSCHKLRYIFLYSCHKLRYIFLYSCHKLR*IFL 823
K+ IFL C K+ +FL C K+ I L C KL +FL C K+ +FL
Sbjct: 166 KVTVIFLAQCIKVTVVFLA-QCVKVTSISLAKCVKLTAVFLAQCVKVTAVFL 216
Score = 31.6 bits (70), Expect = 2.9
Identities = 20/74 (27%), Positives = 40/74 (54%)
Frame = +1
Query: 475 VKISSLFLSQITVHISLFLSQITVHISLFLSQITVHISLFLSQITVHISLFLSQITVHIS 654
VK++ +FL+Q +FL+Q S+ L++ ++FL+Q ++FL+Q IS
Sbjct: 165 VKVTVIFLAQCIKVTVVFLAQCVKVTSISLAKCVKLTAVFLAQCVKVTAVFLAQCVKVIS 224
Query: 655 LFLSQITVHISLLL 696
+ L I + +++
Sbjct: 225 IGLFNIRREMMIII 238
>sp|Q03376|BAR3_CHITE Balbiani ring protein 3 precursor
Length = 1700
Score = 45.4 bits (106), Expect = 2e-04
Identities = 67/269 (24%), Positives = 96/269 (35%), Gaps = 17/269 (6%)
Frame = -3
Query: 839 CDKNKEEIFTVICDKNKEICTVICDKNKEICTVICDKNKEEIFTVICDN--NKEICTVIC 666
CDK T C KE+ T C+ NK+ C CD + T I + + C+ IC
Sbjct: 725 CDK------TCKCKCEKEMPTGGCENNKKWCDETCDCVCPQKNTCIAPKVWDAKTCSCIC 778
Query: 665 ---------DKNKEICTVICDKNKEICTVICDKNKEICTVICDKNKEICTVICDKNKEIC 513
K+ C C +N + C + IC C NK+ C + E C
Sbjct: 779 VNPPKCNSPQVLKDTCCCGC-QNVKSCKAPQKFIENICDCAC-PNKKQCKAPLVWSDEFC 836
Query: 512 TVICDKNKEEIFTVICDK--NKEICTVICDKNKEEIFTVICDKNKEEIFTVICDKNKEEI 339
+C N + T + K NK CT C+ K + C ++ C
Sbjct: 837 DCVC-PNSASMKTCLSPKEWNKVTCTCDCNPPKPD-----CCPGTQKWMDDKCKCGCPNA 890
Query: 338 FTVICDKNKEEIFTVI--CDNNKEICTVICDKNKEEIFTVICDKNKEICTVICDKNKEIC 165
T K FT C + K CT K E T C C + + N +C
Sbjct: 891 QTDCAGGKKFNDFTCSCGCPSGKLDCTG-NTKWSAETCTCGCGDVNRNCGNLKNFNDNLC 949
Query: 164 TVICDKNKEEIFTVICDK--NKEICTVIC 84
C KNK+E+ + N + C +C
Sbjct: 950 QCEC-KNKQEMANCKSPRTWNYDTCKCVC 977
Score = 40.8 bits (94), Expect = 0.005
Identities = 34/129 (26%), Positives = 50/129 (38%), Gaps = 2/129 (1%)
Frame = -3
Query: 794 NKEICTVICDKNKEICTVICDKNKEEIFTVICDNNKEICTVICDKNKEICTVICDKNKEI 615
NK CT C+ K C K ++ C N + C N C+ C K
Sbjct: 856 NKVTCTCDCNPPKPDCCPGTQKWMDDKCKCGCPNAQTDCAGGKKFNDFTCSCGCPSGKLD 915
Query: 614 CTVICDKNKEICTVICDKNKEICTVICDKNKEICTVICDKNKEEIFTVICDK--NKEICT 441
CT + E CT C C + + N +C C KNK+E+ + N + C
Sbjct: 916 CTGNTKWSAETCTCGCGDVNRNCGNLKNFNDNLCQCEC-KNKQEMANCKSPRTWNYDTCK 974
Query: 440 VICDKNKEE 414
+C KN ++
Sbjct: 975 CVC-KNADD 982
Score = 38.9 bits (89), Expect = 0.018
Identities = 53/217 (24%), Positives = 81/217 (37%), Gaps = 14/217 (6%)
Frame = -3
Query: 647 CTVICDKNKEICTVI---CDKNKEICTVICDKNKEICTVICDKNKEICTVICDKNKEEIF 477
C + K K CT CDK T C KE+ T C+ NK+ C CD +
Sbjct: 707 CDCVPGKPKGGCTGAQKWCDK-----TCKCKCEKEMPTGGCENNKKWCDETCDCVCPQKN 761
Query: 476 TVICDK--NKEICTVICDK----NKEEIFTVICDKNKEEIFTVICDKNKEEIFTVICD-- 321
T I K + + C+ IC N ++ C + + + K ++ ICD
Sbjct: 762 TCIAPKVWDAKTCSCICVNPPKCNSPQVLKDTCCCGCQNVKSC---KAPQKFIENICDCA 818
Query: 320 -KNKEEIFTVICDNNKEICTVICDKNKEEIFTVICDK--NKEICTVICDKNKEICTVICD 150
NK++ + ++ E C +C N + T + K NK CT C+ K C
Sbjct: 819 CPNKKQCKAPLVWSD-EFCDCVC-PNSASMKTCLSPKEWNKVTCTCDCNPPKPDCCPGTQ 876
Query: 149 KNKEEIFTVICDKNKEICTVICDKNKEICTVICDKNK 39
K ++ C + C N C+ C K
Sbjct: 877 KWMDDKCKCGCPNAQTDCAGGKKFNDFTCSCGCPSGK 913
Score = 36.6 bits (83), Expect = 0.089
Identities = 30/119 (25%), Positives = 45/119 (37%), Gaps = 6/119 (5%)
Frame = -3
Query: 761 NKEICTVICDKNKEEIFTVICDNNK----EICTVICDKNKEICTVICDKNKEICTVIC-- 600
+KE C C + C N K IC IC ++ +CT ++ E C C
Sbjct: 357 DKEECRCECPVKHD------CKNGKVWDETICQCICPRDAPVCTAGKERCGESCECKCIN 410
Query: 599 DKNKEICTVICDKNKEICTVICDKNKEICTVICDKNKEEIFTVICDKNKEICTVICDKN 423
+ KE C N+ C +C +K++ C K NK C CD++
Sbjct: 411 REPKEGCAKPLVWNENTCKCVCPADKQMSPGGCGSGK--------SFNKLTCQCECDQS 461
Score = 34.3 bits (77), Expect = 0.44
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Frame = -3
Query: 794 NKEICTVICDKNKEICTVICDKNKEEIFTVICDNNKEICTVICDKNKEICTVICDKNKEI 615
++ IC IC ++ +CT KE C + E C I + KE C N+
Sbjct: 378 DETICQCICPRDAPVCTA----GKER-----CGESCE-CKCINREPKEGCAKPLVWNENT 427
Query: 614 CTVICDKNKEICTVICDK----NKEICTVICDKNKEIC 513
C +C +K++ C NK C CD++ C
Sbjct: 428 CKCVCPADKQMSPGGCGSGKSFNKLTCQCECDQSASKC 465
Score = 31.6 bits (70), Expect = 2.9
Identities = 32/124 (25%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Frame = -3
Query: 782 CTVICDKNKEICTVICDKNKEEIFTVICDNNKEICTVICDKNKEICTVICDKNKEICTVI 603
CT + + N+E C C K+K K+ C D N C C C+
Sbjct: 1164 CTGVQEWNEEKCQCECPKDKP----------KKQCPGGQDWNNHQCQCGCPTPAPTCSNN 1213
Query: 602 CDKNKEICTVICD--KNKEIC---TVICDKNKEICTVICDKNKEEIFTVICDK--NKEIC 444
+ C+ C+ K K C + CD C +C KN E+ K N E+C
Sbjct: 1214 QKYSNVSCSCGCNPGKPKNGCPGNQIWCDNT---CRCVCPKNMEKPADNCKTKWWNDEMC 1270
Query: 443 TVIC 432
+C
Sbjct: 1271 QCVC 1274
>sp|P04540|NU5M_TRYBB NADH-ubiquinone oxidoreductase chain 5 (NADH dehydrogenase subunit
5)
Length = 590
Score = 45.4 bits (106), Expect = 2e-04
Identities = 47/219 (21%), Positives = 93/219 (42%), Gaps = 18/219 (8%)
Frame = +3
Query: 132 YFFFILVTNYGTYFFILVTNYGTYFFILVTNYGKNFFFILVTNYGTYFFIIVTNYGKYFF 311
+F F ++ + + F+ N+ +++ LV FI++ ++ + V YG Y++
Sbjct: 5 FFLFFIMFGFISGSFMFGRNFLSFWLSLVM-----IIFIVLCMIFSFLMVSVCLYGYYYY 59
Query: 312 -FILVTNYGKYFFFILVTNYGKYFFFILVTNYGKYFFFILVTNYGTYFFILVTNYGKNFF 488
F L+ F ++ G Y F +L+ N + F + Y YF +L+ + F+
Sbjct: 60 DFCLILMLDFCFIWLTYVCSGFYMFIMLLINM-VFCFIVFYAFYYMYFDMLLGRFLIIFW 118
Query: 489 -FILVTNYGTYFFILVTNY------GTYFFILVTNYGTYFFILVTNYGTYFF------IL 629
F++ N + +T Y G + F L++ + FF L + +F +L
Sbjct: 119 IFVVCMNLFILSYDFLTAYCGWELLGLFSFFLISYFWYRFFALKFGFKAFFIGKIGDVLL 178
Query: 630 VTNYGTYF----FILVTNYGTYFFIIVTNYGKYFFFILV 734
+ + F F + T Y FF + Y ++ +LV
Sbjct: 179 IFAFSIIFLSNGFCMTTFYFLNFFCMDYYYIEFSICLLV 217
Score = 34.7 bits (78), Expect = 0.34
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 24/177 (13%)
Frame = +3
Query: 30 NFFFILVTNYGTYFF----ILVTNY----------GTYFFILVTNYGKYFFFILVTNYGT 167
+F + V YG Y++ IL+ ++ G Y FI++ + F + Y
Sbjct: 45 SFLMVSVCLYGYYYYDFCLILMLDFCFIWLTYVCSGFYMFIMLLINMVFCFIVFYAFYYM 104
Query: 168 YFFILVTNYGTYFFILVTNYGKNFFFILVTNYGTYFFIIVTNY------GKYFFFILVTN 329
YF +L+ + F+I F++ N + +T Y G + FF++ +
Sbjct: 105 YFDMLLGRFLIIFWI----------FVVCMNLFILSYDFLTAYCGWELLGLFSFFLI--S 152
Query: 330 YGKYFFFILVTNYGKYFFFILVTNYGKYFFFILVTNYGTYF----FILVTNYGKNFF 488
Y Y FF L +G FFI GK +L+ + F F + T Y NFF
Sbjct: 153 YFWYRFFAL--KFGFKAFFI-----GKIGDVLLIFAFSIIFLSNGFCMTTFYFLNFF 202
Score = 33.5 bits (75), Expect = 0.76
Identities = 26/122 (21%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
Frame = +3
Query: 483 FFFILVTNYGTYFFILVTNYGTYFFILVTNYGTYFFILVTNYGTYFFILVTNYGTYFF-- 656
F F ++ + + F+ N+ +++ LV FI++ ++ + V YG Y++
Sbjct: 6 FLFFIMFGFISGSFMFGRNFLSFWLSLVM----IIFIVLCMIFSFLMVSVCLYGYYYYDF 61
Query: 657 --ILVTNYGTYFFIIVTNYGKYFFFILVTNYGTYFFILVTNYGTYFFILVTNYGKYFFFI 830
IL+ ++ + ++ G Y F +L+ N F + Y YF +L+ + F+
Sbjct: 62 CLILMLDF-CFIWLTYVCSGFYMFIMLLINMVFCFIVFYAFYYMYFDMLLGRFLIIFWIF 120
Query: 831 LV 836
+V
Sbjct: 121 VV 122
>sp|O74420|WTF13_SCHPO Hypothetical protein wtf13
Length = 418
Score = 43.5 bits (101), Expect = 7e-04
Identities = 26/81 (32%), Positives = 41/81 (50%)
Frame = +2
Query: 497 CHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLR 676
C K+ IFL C K+ I L C K+ +FL C K+ +FL C K+ + LY+ K
Sbjct: 149 CIKVTVIFLAQCVKVTAISLAQCVKVTAVFLAKCVKVTAVFLAKCVKVIAVGLYNSKKDL 208
Query: 677 YIFLYYCHKLR*IFLLYSCHK 739
+ ++ + F+L+ C K
Sbjct: 209 VVTIWLAWVVI-CFILFGCVK 228
Score = 37.0 bits (84), Expect = 0.068
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +2
Query: 47 CHKLRYIFLYSCHKLRYIFLYSCHKLR*IFLLYSCHKLRYIFLYSCHKLRYIFLYSCHK 223
C K+ IFL C K+ I L C K+ +FL C K+ +FL C K+ + LY+ K
Sbjct: 149 CIKVTVIFLAQCVKVTAISLAQCVKVTAVFLA-KCVKVTAVFLAKCVKVIAVGLYNSKK 206
Score = 36.6 bits (83), Expect = 0.089
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +2
Query: 629 CHKLRYIFLYSCHKLRYIFLYYCHKLR*IFLLYSCHKLRYIFLYSCHKLRYIFLYSCHK 805
C K+ IFL C K+ I L C K+ +FL C K+ +FL C K+ + LY+ K
Sbjct: 149 CIKVTVIFLAQCVKVTAISLAQCVKVTAVFLA-KCVKVTAVFLAKCVKVIAVGLYNSKK 206
Score = 35.4 bits (80), Expect = 0.20
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 488 LYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCH 667
L C K+ I L C K+ +FL C K+ +FL C K+ + LY+ K + ++
Sbjct: 157 LAQCVKVTAISLAQCVKVTAVFLAKCVKVTAVFLAKCVKVIAVGLYNSKKDLVVTIWLAW 216
Query: 668 KLRYIFLYYCHK 703
+ L+ C K
Sbjct: 217 VVICFILFGCVK 228
Score = 32.7 bits (73), Expect = 1.3
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 662 CHKLRYIFLYYCHKLR*IFLLYSCHKLRYIFLYSCHKLRYIFLYSCHKL 808
C K+ IFL C K+ I L C K+ +FL C K+ +FL C K+
Sbjct: 149 CIKVTVIFLAQCVKVTAISLA-QCVKVTAVFLAKCVKVTAVFLAKCVKV 196
>sp|P47179|DAN4_YEAST Cell wall protein DAN4 precursor
Length = 1161
Score = 42.7 bits (99), Expect = 0.001
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 14/229 (6%)
Frame = +1
Query: 13 SQITVKISSLFLSQITVHIS-LFLSQITVHIS-LFLSQITVNISSLFLSQIT-----VHI 171
SQ+T +S+ T + SQ+T +S+ T ++ SQ+T +
Sbjct: 391 SQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTV 450
Query: 172 SLFLSQITVHISLFLSQITVKISSLFLSQITVHIS-LLLSQITVNISSLFLSQITVNISS 348
S F S + S SQ+T +S+ T + SQ+T + +S+ T ++
Sbjct: 451 SEFTSSVEPTRS---SQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTVSEFTSSVEP 507
Query: 349 LFLSQITVNISSLFLSQITVNISSLFLSQITV--HISLF---LSQITVKISSLFLSQITV 513
+ SQ+T + +S++T ++ + SQ+T +S F S+IT L S+ T
Sbjct: 508 IRSSQVTSSAEPTTVSEVTSSVEPIRSSQVTTTEPVSSFGSTFSEITSSAEPLSFSKATT 567
Query: 514 HI-SLFLSQITVHISLFLSQITVHISLFLSQITVHISLFLSQITVHISL 657
S+ +QIT+ L +S + S S I V S +S SL
Sbjct: 568 SAESISSNQITISSELIVSSVITSSSEIPSSIEVLTSSGISSSVEPTSL 616
Score = 30.4 bits (67), Expect = 6.4
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 20/223 (8%)
Frame = +1
Query: 235 ISSLFLSQITVHIS-LLLSQITVNISSLFLSQITVNISSLFLSQITVNISSLFLSQITVN 411
ISS SQ+T +S++T ++ SQ+T + +S+ T ++ SQ+T +
Sbjct: 361 ISSSSPSQVTSSAEPTTVSEVTSSVEPTRSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSS 420
Query: 412 ISSLFLSQITVHIS-LFLSQITVKISSLFLSQITVHIS-LFLSQIT-----VHISLFLSQ 570
+S+ T + SQ+T +S+ T + SQ+T +S F S
Sbjct: 421 AEPTTVSEFTSSVEPTRSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTVSEFTSS 480
Query: 571 ITVHISLFLSQIT-----VHISLFLSQITVHISLFLSQITVHIS-LLLSQITVNISSLFL 732
+ S SQ+T +S F S + + SQ+T +S++T ++ +
Sbjct: 481 VEPTRS---SQVTSSAEPTTVSEFTSSVE---PIRSSQVTSSAEPTTVSEVTSSVEPIRS 534
Query: 733 SQITV--HISLF---LSQITVHIS-LFLSQITVNISSLFLSQI 843
SQ+T +S F S+IT L S+ T + S+ +QI
Sbjct: 535 SQVTTTEPVSSFGSTFSEITSSAEPLSFSKATTSAESISSNQI 577
>sp|P24499|ATP6_TRYBB ATP synthase a chain (ATPase protein 6)
Length = 229
Score = 42.7 bits (99), Expect = 0.001
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 6/227 (2%)
Frame = +2
Query: 131 IFLLYSCH----KLRYIFLYSCHKLRYIFLYSCHKLR*KFLLYSCHKLRYIFLYYCHKLR 298
+FL + C +L Y +L +I ++C L FLL+ L Y+F+ C L
Sbjct: 1 MFLFFFCDLFWLRLLLCMYYCVSRLCFIVYFNCLMLIFDFLLFCLFDL-YLFVGLCLFLL 59
Query: 299 *IFLLYSCHKLR*IFLLYSCHKLR*IFLLYSCHKLR*IFLLYSCHKLRYIFLYSCHKLR* 478
F+L++ + L +LY C ++LL+ +FLLY ++F + C
Sbjct: 60 LWFMLFNLYSL----ILYYCITYLNLYLLFCI-----VFLLYIA--FLFLFCFLCDFFLF 108
Query: 479 KFLLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLY 658
LL + F+ F C L C+ L S H L +F
Sbjct: 109 NNLLVGDSFMDVFFIRFLLCFLECFSLLCRCLSTFLRLFCN------LLSSHFLLLMF-- 160
Query: 659 SCHKLRYIFLYYCHKLR*IFLLYS--CHKLRYIFLYSCHKLRYIFLY 793
+ F Y+ +F Y C+ + +IF++ L Y+FLY
Sbjct: 161 ------FDFFYFIF----VFFFYGVFCYFILFIFVFCFCLLFYVFLY 197
Score = 39.3 bits (90), Expect = 0.014
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 5/214 (2%)
Frame = +2
Query: 32 FLLYSCHKLRYIFLYSCHKLRYIFLYSCHKLR*IFLLYSCHKLRYIFLYSCHKLRYIFLY 211
FL + C L ++ L C +Y C + ++C L + FL C Y+F+
Sbjct: 2 FLFFFCD-LFWLRLLLC-------MYYCVSRLCFIVYFNCLMLIFDFLLFCLFDLYLFVG 53
Query: 212 SCHKLR*KFLLYSCHKLRYIFLYYCHKLR*IFLLYSCHKLR*IFLLYSCHKLR*IFL--L 385
C L F+L++ + L LYYC ++LL+ +FLLY FL
Sbjct: 54 LCLFLLLWFMLFNLYSL---ILYYCITYLNLYLLFCI-----VFLLYIAFLFLFCFLCDF 105
Query: 386 YSCHKLR*IFLLYSCHKLRYIFLY-SCHKLR*KFLLYSCHKLRYIFLYSCHKLRYIFLYS 562
+ + L +R++ + C L + L S + L S H L +F
Sbjct: 106 FLFNNLLVGDSFMDVFFIRFLLCFLECFSLLCRCL--STFLRLFCNLLSSHFLLLMFFDF 163
Query: 563 CHKLRYIFLYS--CHKLRYIFLYSCHKLRYIFLY 658
+ + F Y C+ + +IF++ L Y+FLY
Sbjct: 164 FYFIFVFFFYGVFCYFILFIFVFCFCLLFYVFLY 197
Score = 34.7 bits (78), Expect = 0.34
Identities = 49/190 (25%), Positives = 76/190 (40%), Gaps = 4/190 (2%)
Frame = +2
Query: 2 LYSCHKLR*KFLLYSCHKLRYIFLYSCHKLRYIFLYSCHKLR*IFLLYSCHKLRYIFLYS 181
+Y C + ++C L + FL C Y+F+ C L F+L++ + L LY
Sbjct: 18 MYYCVSRLCFIVYFNCLMLIFDFLLFCLFDLYLFVGLCLFLLLWFMLFNLYSL---ILYY 74
Query: 182 CHKLRYIFLYSCHKLR*KFLLYSCHKLRYIFLYYCHKLR*IFLLYSCHKLR*IFLLYSCH 361
C ++L C FLLY ++F + C LL + F+ +
Sbjct: 75 CITYLNLYLLFCI----VFLLYIA--FLFLFCFLCDFFLFNNLLVGDSFMDVFFIRFLLC 128
Query: 362 KLR*IFLLYSCHK--LR*IFLLYSCHKLRYIFLYSCHKLR*KFLLYS--CHKLRYIFLYS 529
L LL C LR L S H L +F + F Y C+ + +IF++
Sbjct: 129 FLECFSLLCRCLSTFLRLFCNLLSSHFLLLMF-FDFFYFIFVFFFYGVFCYFILFIFVFC 187
Query: 530 CHKLRYIFLY 559
L Y+FLY
Sbjct: 188 FCLLFYVFLY 197
Score = 33.1 bits (74), Expect = 0.99
Identities = 25/87 (28%), Positives = 40/87 (45%)
Frame = +2
Query: 569 KLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYYCHKLR*IFLLYSCHKLRY 748
+L Y +L +I ++C L + FL C Y+F+ C L F+L++ + L
Sbjct: 13 RLLLCMYYCVSRLCFIVYFNCLMLIFDFLLFCLFDLYLFVGLCLFLLLWFMLFNLYSL-- 70
Query: 749 IFLYSCHKLRYIFLYSCHKLR*IFLLY 829
LY C ++L C +FLLY
Sbjct: 71 -ILYYCITYLNLYLLFCI----VFLLY 92
Score = 30.8 bits (68), Expect = 4.9
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Frame = +2
Query: 536 KLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSCHKLRYIFLYSC---------HKLRYIFL 688
+L Y +L +I ++C L + FL C Y+F+ C L + L
Sbjct: 13 RLLLCMYYCVSRLCFIVYFNCLMLIFDFLLFCLFDLYLFVGLCLFLLLWFMLFNLYSLIL 72
Query: 689 YYCHKLR*IFLLYSCHKLRYI-FLYSCHKLRYIFLYS 796
YYC ++LL+ L YI FL+ L FL++
Sbjct: 73 YYCITYLNLYLLFCIVFLLYIAFLFLFCFLCDFFLFN 109
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,633,305
Number of Sequences: 369166
Number of extensions: 2878969
Number of successful extensions: 11743
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10420
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8245425915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)