Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_O14
(496 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P17663|FRIH1_XENLA Ferritin heavy chain 1 59 8e-09
sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17) 58 1e-08
sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) ... 57 2e-08
sp|P49947|FRIM_SALSA Ferritin, middle subunit (Ferritin M) 54 2e-07
sp|P07229|FRI1_RANCA Ferritin, higher subunit (Ferritin H) 53 3e-07
sp|Q7SXA5|FRIL_XENLA Ferritin light chain, oocyte isoform (... 53 3e-07
sp|P42577|FRIS_LYMST Soma ferritin 52 6e-07
sp|P25915|FRIH_RABIT Ferritin heavy chain (Ferritin H subunit) 52 6e-07
sp|P08267|FRIH_CHICK Ferritin heavy chain (Ferritin H subunit) 52 8e-07
sp|Q5R8J7|FRIH_PONPY Ferritin heavy chain (Ferritin H subunit) 51 1e-06
>sp|P17663|FRIH1_XENLA Ferritin heavy chain 1
Length = 176
Score = 58.5 bits (140), Expect = 8e-09
Identities = 32/89 (35%), Positives = 47/89 (52%)
Frame = -3
Query: 494 RFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLT 315
++Q RG +V D+K E E E Q L LEK V+Q L L KLA +K+D L
Sbjct: 68 KYQNKRGGRVVLQDIKKPERDEWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLC 127
Query: 314 SFLKDRVILRQIKVIRKRASQLRNLRRSG 228
FL+ + Q+K +++ + NL+R G
Sbjct: 128 DFLESEYLEEQVKAMKELGDYITNLKRLG 156
>sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17)
Length = 176
Score = 57.8 bits (138), Expect = 1e-08
Identities = 32/89 (35%), Positives = 47/89 (52%)
Frame = -3
Query: 494 RFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLT 315
++Q RG +V D+K E E E Q L LEK V+Q L L KLA +K+D L
Sbjct: 68 KYQNKRGGRVVLQDIKKPERDEWGNTLEATQAALQLEKTVNQALLDLHKLASDKVDAHLC 127
Query: 314 SFLKDRVILRQIKVIRKRASQLRNLRRSG 228
FL+ + Q+K +++ + NL+R G
Sbjct: 128 DFLESEYLEEQVKAMKQLGDYITNLKRLG 156
>sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) (Ferritin X) (Ferritin H')
Length = 176
Score = 57.0 bits (136), Expect = 2e-08
Identities = 33/89 (37%), Positives = 47/89 (52%)
Frame = -3
Query: 494 RFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLT 315
++Q RG +V D+K E E E Q L LEK V+Q L L KLA +K+D L
Sbjct: 68 KYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLC 127
Query: 314 SFLKDRVILRQIKVIRKRASQLRNLRRSG 228
FL+ + Q+K I++ + NL+R G
Sbjct: 128 DFLESEYLEEQVKDIKRIGDFITNLKRLG 156
>sp|P49947|FRIM_SALSA Ferritin, middle subunit (Ferritin M)
Length = 176
Score = 54.3 bits (129), Expect = 2e-07
Identities = 34/105 (32%), Positives = 52/105 (49%)
Frame = -3
Query: 491 FQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLTS 312
FQ RG ++ D+K E E E Q L LEK+V+Q L L K+A +K+D L
Sbjct: 69 FQNKRGGRILLQDIKKPERDEWGNGLEAMQCALQLEKNVNQALLDLHKIASDKVDPHLCD 128
Query: 311 FLKDRVILRQIKVIRKRASQLRNLRRSGDDVTPFLTSSLHARHEI 177
FL+ + Q++ I+K + NL + D V + L +H +
Sbjct: 129 FLETHYLNEQVEAIKKLGDHITNLTKM-DAVKNKMAEYLFDKHTL 172
>sp|P07229|FRI1_RANCA Ferritin, higher subunit (Ferritin H)
Length = 176
Score = 53.1 bits (126), Expect = 3e-07
Identities = 31/87 (35%), Positives = 44/87 (50%)
Frame = -3
Query: 488 QVNRGQKVTWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLTSF 309
Q RG ++ DVK E E E Q L LEK V+Q L L K+ +K+D L F
Sbjct: 70 QNKRGGRIVLQDVKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCDF 129
Query: 308 LKDRVILRQIKVIRKRASQLRNLRRSG 228
L+ + Q+K I++ + NL+R G
Sbjct: 130 LETEYLEEQVKSIKQLGDYITNLKRLG 156
>sp|Q7SXA5|FRIL_XENLA Ferritin light chain, oocyte isoform (B-ferritin) (XeBF) (GV-LCH)
Length = 177
Score = 53.1 bits (126), Expect = 3e-07
Identities = 29/87 (33%), Positives = 46/87 (52%)
Frame = -3
Query: 494 RFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLT 315
+FQ RG +V DVK + E + + LNLEK ++Q L L K+A + D +
Sbjct: 70 KFQNKRGGRVVLQDVKKPDDDEWGNGTKAMEVALNLEKSINQAVLDLHKIATDHTDPHMQ 129
Query: 314 SFLKDRVILRQIKVIRKRASQLRNLRR 234
+L+ + ++K+I+K L NLRR
Sbjct: 130 DYLEHEFLEEEVKLIKKLGDHLTNLRR 156
>sp|P42577|FRIS_LYMST Soma ferritin
Length = 174
Score = 52.4 bits (124), Expect = 6e-07
Identities = 28/96 (29%), Positives = 48/96 (50%)
Frame = -3
Query: 494 RFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLT 315
++Q RG ++ D+K + E E Q L LEK V+Q+ L L KL D +
Sbjct: 69 KYQNKRGGRIVLQDIKKPDRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMA 128
Query: 314 SFLKDRVILRQIKVIRKRASQLRNLRRSGDDVTPFL 207
FL+ + Q+K I++ + + NL+R G + ++
Sbjct: 129 DFLESEFLEEQVKSIKELSDYITNLKRVGPGLGEYI 164
>sp|P25915|FRIH_RABIT Ferritin heavy chain (Ferritin H subunit)
Length = 164
Score = 52.4 bits (124), Expect = 6e-07
Identities = 28/89 (31%), Positives = 47/89 (52%)
Frame = -3
Query: 494 RFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLT 315
+ Q RG ++ D+K E+ + + L+LEK V+Q+ L L KLA +K D L
Sbjct: 53 KLQNQRGGRIFLQDIKKPEYDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLC 112
Query: 314 SFLKDRVILRQIKVIRKRASQLRNLRRSG 228
F++ + Q+K I++ + NLR+ G
Sbjct: 113 DFIETHYLNEQVKSIKELGDHVTNLRKMG 141
>sp|P08267|FRIH_CHICK Ferritin heavy chain (Ferritin H subunit)
Length = 180
Score = 52.0 bits (123), Expect = 8e-07
Identities = 28/89 (31%), Positives = 47/89 (52%)
Frame = -3
Query: 494 RFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLT 315
+ Q RG ++ D+K + + + L+LEK+V+Q+ L L KLA EK D L
Sbjct: 71 KLQNQRGGRIFLQDIKKPDRDDWENGLTAMECALHLEKNVNQSLLELHKLATEKNDPHLC 130
Query: 314 SFLKDRVILRQIKVIRKRASQLRNLRRSG 228
F++ + Q+K I++ + NLR+ G
Sbjct: 131 DFIETHYLDEQVKAIKQLGDHVTNLRKMG 159
>sp|Q5R8J7|FRIH_PONPY Ferritin heavy chain (Ferritin H subunit)
Length = 183
Score = 51.2 bits (121), Expect = 1e-06
Identities = 28/89 (31%), Positives = 47/89 (52%)
Frame = -3
Query: 494 RFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLT 315
+ Q RG ++ D+K + + + L+LEK+V+Q+ L L KLA +K D L
Sbjct: 72 KLQNQRGGRIFLQDIKKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLC 131
Query: 314 SFLKDRVILRQIKVIRKRASQLRNLRRSG 228
FL+ + Q+K I++ + NLR+ G
Sbjct: 132 DFLETHYLNEQVKAIKELGDHVTNLRKMG 160
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,458,422
Number of Sequences: 369166
Number of extensions: 829099
Number of successful extensions: 2114
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2114
length of database: 68,354,980
effective HSP length: 102
effective length of database: 49,512,010
effective search space used: 3069744620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)