Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_O09
(393 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17) 36 0.032
sp|P08267|FRIH_CHICK Ferritin heavy chain (Ferritin H subunit) 36 0.032
sp|Q5R8J7|FRIH_PONPY Ferritin heavy chain (Ferritin H subunit) 36 0.032
sp|P17663|FRIH1_XENLA Ferritin heavy chain 1 35 0.041
sp|O46414|FRIH_BOVIN Ferritin heavy chain (Ferritin H subunit) 35 0.054
sp|P02794|FRIH_HUMAN Ferritin heavy chain (Ferritin H subun... 35 0.054
sp|P18685|FRIH_SHEEP Ferritin heavy chain (Ferritin H subunit) 35 0.054
sp|P19130|FRIH_PIG Ferritin heavy chain (Ferritin H subunit) 35 0.054
sp|Q9XT73|FRIH_TRIVU Ferritin heavy chain (Ferritin H subunit) 35 0.071
sp|P19132|FRIH_RAT Ferritin heavy chain (Ferritin H subunit) 34 0.092
>sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17)
Length = 176
Score = 35.8 bits (81), Expect = 0.032
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 14 TRHQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 166
T +Q L L KLA +K+D L FL+ + Q+K +++ + NL+R G
Sbjct: 106 TVNQALLDLHKLASDKVDAHLCDFLESEYLEEQVKAMKQLGDYITNLKRLG 156
>sp|P08267|FRIH_CHICK Ferritin heavy chain (Ferritin H subunit)
Length = 180
Score = 35.8 bits (81), Expect = 0.032
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 20 HQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 166
+Q+ L L KLA EK D L F++ + Q+K I++ + NLR+ G
Sbjct: 111 NQSLLELHKLATEKNDPHLCDFIETHYLDEQVKAIKQLGDHVTNLRKMG 159
>sp|Q5R8J7|FRIH_PONPY Ferritin heavy chain (Ferritin H subunit)
Length = 183
Score = 35.8 bits (81), Expect = 0.032
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 20 HQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 166
+Q+ L L KLA +K D L FL+ + Q+K I++ + NLR+ G
Sbjct: 112 NQSLLELHKLATDKNDPHLCDFLETHYLNEQVKAIKELGDHVTNLRKMG 160
>sp|P17663|FRIH1_XENLA Ferritin heavy chain 1
Length = 176
Score = 35.4 bits (80), Expect = 0.041
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 14 TRHQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 166
T +Q L L KLA +K+D L FL+ + Q+K +++ + NL+R G
Sbjct: 106 TVNQALLDLHKLASDKVDPQLCDFLESEYLEEQVKAMKELGDYITNLKRLG 156
>sp|O46414|FRIH_BOVIN Ferritin heavy chain (Ferritin H subunit)
Length = 181
Score = 35.0 bits (79), Expect = 0.054
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 20 HQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 166
+Q+ L L KLA EK D L F++ + Q++ I++ + NLR+ G
Sbjct: 112 NQSLLELHKLATEKNDPHLCDFIETHYLNEQVEAIKELGDHITNLRKMG 160
>sp|P02794|FRIH_HUMAN Ferritin heavy chain (Ferritin H subunit) (Proliferation-inducing
gene 15 protein)
Length = 183
Score = 35.0 bits (79), Expect = 0.054
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 20 HQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 166
+Q+ L L KLA +K D L F++ + Q+K I++ + NLR+ G
Sbjct: 112 NQSLLELHKLATDKNDPHLCDFIETHYLNEQVKAIKELGDHVTNLRKMG 160
>sp|P18685|FRIH_SHEEP Ferritin heavy chain (Ferritin H subunit)
Length = 171
Score = 35.0 bits (79), Expect = 0.054
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 20 HQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 166
+Q+ L L KLA EK D L F++ + Q++ I++ + NLR+ G
Sbjct: 112 NQSLLELHKLATEKNDPHLCDFIETHYLNEQVEAIKELGDHITNLRKMG 160
>sp|P19130|FRIH_PIG Ferritin heavy chain (Ferritin H subunit)
Length = 181
Score = 35.0 bits (79), Expect = 0.054
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 20 HQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 166
+Q+ L L KLA +K D L F++ + Q+K I++ + NL R G
Sbjct: 112 YQSLLELHKLATDKNDPHLCDFIETHYLHEQVKAIKELGDHITNLHRMG 160
>sp|Q9XT73|FRIH_TRIVU Ferritin heavy chain (Ferritin H subunit)
Length = 183
Score = 34.7 bits (78), Expect = 0.071
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 20 HQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 166
+Q+ L L KLA +K D L F++ + Q+K I++ + NLR+ G
Sbjct: 112 NQSLLELHKLATDKNDPHLCDFIETHYLDEQVKAIKQLGDHVTNLRKMG 160
>sp|P19132|FRIH_RAT Ferritin heavy chain (Ferritin H subunit)
Length = 182
Score = 34.3 bits (77), Expect = 0.092
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 20 HQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRRSG 166
+Q+ L L KLA +K D L F++ + Q+K I++ + NLR+ G
Sbjct: 112 NQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMG 160
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,474,460
Number of Sequences: 369166
Number of extensions: 536328
Number of successful extensions: 1132
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 68,354,980
effective HSP length: 96
effective length of database: 50,620,420
effective search space used: 1721094280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)