Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_M22
(296 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor 46 2e-05
sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (To... 42 4e-04
sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromo... 38 0.006
sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3... 38 0.008
sp|Q29116|TENA_PIG Tenascin precursor (TN) (Hexabrachion) (... 35 0.053
sp|Q90495|ECAR_ECHCA Ecarin precursor 35 0.069
sp|P17511|MT1_CAEEL Metallothionein-I (MT-I) 34 0.12
sp|Q09244|YP95_CAEEL Hypothetical protein C28H8.5 precursor 34 0.12
sp|P41902|CRS5_YEAST Metallothionein-like protein CRS5 33 0.20
sp|P55953|MT_STENE Metallothionein (MT) 33 0.20
>sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor
Length = 180
Score = 46.2 bits (108), Expect = 2e-05
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Frame = +3
Query: 30 ECADTGDDCSSKTGEDCTNGE----VLEKCPKSCHLCGDCADSRPDCAFLKERGDCDKMD 197
EC D +DCS C+ E + CPK+C+ C C D+ C RG C K D
Sbjct: 106 ECTDLANDCSYNQNR-CSVKEYSSLMHRLCPKTCNACNICEDANKMCPIWVPRGFCSKFD 164
Query: 198 -DRV---CRKTCGGC 230
D+V C K+C C
Sbjct: 165 HDKVQKSCAKSCNIC 179
Score = 31.6 bits (70), Expect = 0.58
Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 42/116 (36%)
Frame = +3
Query: 9 VAAMCEDECADTGDDCSSKTGEDCTN--------------------GEVLEKCPKSCHLC 128
V C ++C T C+ K C++ ++ E+CP +C+ C
Sbjct: 26 VTQHCLEKCPATCGKCNRKNANLCSDKSKPDICVNLKTLCNSVEFYDKLSEQCPSTCNRC 85
Query: 129 -------------------GDCADSRPDCAFLKER---GDCDKMDDRVCRKTCGGC 230
+C D DC++ + R + + R+C KTC C
Sbjct: 86 PHNGTNPENKTGGNGGTGTQECTDLANDCSYNQNRCSVKEYSSLMHRLCPKTCNAC 141
>sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (Toxocara excretory-secretory
antigen 26) (TES-26)
Length = 262
Score = 42.0 bits (97), Expect = 4e-04
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Frame = +3
Query: 3 LIVAAMCEDECADTGDDCSSKTGEDCTN--GEVLE-KCPKSCHLCGDCADSRPDCAF--- 164
L V++ +C D+ DC++ G T +VL+ +C ++C+ C DC D +CA
Sbjct: 13 LFVSSGVAQQCMDSASDCAANAGSCFTRPVSQVLQNRCQRTCNTC-DCRDEANNCAASIN 71
Query: 165 LKERGDCDKMDDRVCRKTCGGC 230
L + + + C+KTCG C
Sbjct: 72 LCQNPTFEPLVRDRCQKTCGLC 93
>sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromosome II precursor
Length = 154
Score = 38.1 bits (87), Expect = 0.006
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
Frame = +3
Query: 12 AAMCEDECADTGDDCSSKTGEDCTNGE----VLEKCPKSCHLCG--------DCADSRPD 155
A+ C D D DC+ T C+N + + + CPK+C CG C DS +
Sbjct: 64 ASTCAD---DPNTDCTQYTSL-CSNAKYTPLLQQFCPKTCGFCGGGSTAAPVQCVDSSTN 119
Query: 156 CAFLKERGDCDKM------DDRVCRKTCGGC 230
CA ++ G C + C KTC C
Sbjct: 120 CANWEKNGFCSSTFYDCANKKQYCAKTCKLC 150
>sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3 precursor
Length = 683
Score = 37.7 bits (86), Expect = 0.008
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Frame = +3
Query: 21 CEDECADTGDDCS---SKTGEDCTN-GEVLEKCPKSCHLC------GDCADSRPDCAFLK 170
C+ D C ++ G+ +N G + +C SC +C G CAD DCA
Sbjct: 576 CDSPMCYNEDQCCPIWAQRGQCRSNPGYMTCQCKVSCGVCRPNYVYGPCADYHYDCAAWA 635
Query: 171 ERGDC--DKMDDRVCRKTCGGC 230
RG+C +K CR++C C
Sbjct: 636 RRGECLKNKWMPENCRRSCNTC 657
Score = 30.0 bits (66), Expect = 1.7
Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 10/52 (19%)
Frame = +3
Query: 105 CPKSCHLCG-------DCADSRPDCAFLKERGDCDKMD---DRVCRKTCGGC 230
C SC C +C+D +CA G+C+K CR +C C
Sbjct: 489 CKASCRQCTPNYNINEECSDRHTNCAMWSRSGECNKNPLWMSENCRSSCQKC 540
>sp|Q29116|TENA_PIG Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
(GMEM) (JI) (Miotendinous antigen)
(Glioma-associated-extracellular matrix antigen) (GP
150-225) (Tenascin-C) (TN-C) (P230)
Length = 1746
Score = 35.0 bits (79), Expect = 0.053
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 63 KTGEDCTNGEVLEKCPKSCHLCGDCADSRPDCAFLKERGDCDKM 194
+TGEDC+ +CP CH G C R +C + DC +M
Sbjct: 429 RTGEDCSQ----LRCPNDCHGRGRCVQGRCECEHGFQGYDCSEM 468
Score = 33.1 bits (74), Expect = 0.20
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +3
Query: 69 GEDCTNGEVLEKCPKSCHLCGDCADSRPDCAFLKERGDCDKMDDRVCRKTCGG 227
G DC+ +CP CH G C D R +C E DC ++ C C G
Sbjct: 369 GADCSE----RRCPSDCHNRGRCLDGRCECDDGFEGEDCGELR---CPGGCSG 414
Score = 31.6 bits (70), Expect = 0.58
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 9/49 (18%)
Frame = +3
Query: 66 TGEDCTNGEVLEKCPKSCHLCGDCADSR---------PDCAFLKERGDC 185
TGEDC +CP C G C D R PDCA L DC
Sbjct: 492 TGEDCRE----LRCPGDCSQRGRCVDGRCVCEHGFAGPDCADLACPSDC 536
Score = 30.0 bits (66), Expect = 1.7
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 9/49 (18%)
Frame = +3
Query: 69 GEDCTNGEVLEKCPKSCHLCGDCADSR---------PDCAFLKERGDCD 188
G +C+ E CP +CHL G C D + DC+ L DC+
Sbjct: 182 GPNCSEPE----CPSNCHLRGQCVDGQCVCNEGFTGEDCSQLACPSDCN 226
Score = 30.0 bits (66), Expect = 1.7
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +3
Query: 66 TGEDCTNGEVLEKCPKSCHLCGDCADSRPDCAFLKERGDCDKMDDRVCRKTCGG 227
TGEDC GE++ CPK C G C + C E DC ++ C C G
Sbjct: 306 TGEDC--GELI--CPKDCFDRGRCINGTCYCDEGFEGEDCGRL---ACPHGCRG 352
Score = 28.5 bits (62), Expect = 4.9
Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 9/70 (12%)
Frame = +3
Query: 9 VAAMCEDECADTGDDCSSKTGEDCTNGEVLEKCPKSCHLCGDCAD---------SRPDCA 161
V CE E G DCS + CP CH G C + + DC
Sbjct: 450 VQGRCECEHGFQGYDCSEMS------------CPHDCHQHGRCVNGMCVCDDGYTGEDCR 497
Query: 162 FLKERGDCDK 191
L+ GDC +
Sbjct: 498 ELRCPGDCSQ 507
>sp|Q90495|ECAR_ECHCA Ecarin precursor
Length = 616
Score = 34.7 bits (78), Expect = 0.069
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +3
Query: 15 AMCEDECADTGDDCSSKTGEDCTNGEVLEKCPKSCHLCGDCADSRPDC 158
A C + C D C K G +C NGE +KC K +C +R DC
Sbjct: 425 ADCRNPCCDAAT-CKLKPGAECGNGECCDKC-KIRKAGTECRPARDDC 470
>sp|P17511|MT1_CAEEL Metallothionein-I (MT-I)
Length = 75
Score = 33.9 bits (76), Expect = 0.12
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +3
Query: 21 CEDECADTGDDCSSKTGEDCTNGEVLEKCPKSCHLCGDCADSRPDCAFLKERGD 182
C D+C +GD C K C + CP C GDC + CA K+ GD
Sbjct: 14 CGDKCECSGDKCCEK--YCCEEASEKKCCPAGCK--GDCKCANCHCAEQKQCGD 63
>sp|Q09244|YP95_CAEEL Hypothetical protein C28H8.5 precursor
Length = 302
Score = 33.9 bits (76), Expect = 0.12
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 12 AAMCEDECADTGDDCS---SKTGEDCTNGEVLEK-CPKSCHLCGDCADSRPDCAFL 167
+A +C DT +C+ + DC N E++ CP++C CG+ D + D L
Sbjct: 73 SAKIAPKCRDTDMNCAVWVATNTSDCENVELVNSHCPRTCQTCGEPIDPKYDVKLL 128
>sp|P41902|CRS5_YEAST Metallothionein-like protein CRS5
Length = 69
Score = 33.1 bits (74), Expect = 0.20
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Frame = +3
Query: 21 CEDECADTGDDCSSKTGEDCTNGEVLEKCPKS-----CHLCGDCADSRPDCAFLKERGDC 185
CE EC C S C+ GE KC S C CG+ C K + +C
Sbjct: 8 CEGECCKDSCHCGSTCLPSCSGGEKC-KCDHSTGSPQCKSCGEKCKCETTCTCEKSKCNC 66
Query: 186 DK 191
+K
Sbjct: 67 EK 68
>sp|P55953|MT_STENE Metallothionein (MT)
Length = 64
Score = 33.1 bits (74), Expect = 0.20
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 33 CADTGDDCSSKTGEDCTNGEVLEKCPKSCHLCGDCADSRPDCA 161
C G +C+ K E CT GE C K CG C ++ CA
Sbjct: 8 CCKEGKECACKGKECCTTGE----CCKDGTCCGKCTNAACKCA 46
Score = 30.4 bits (67), Expect = 1.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Frame = +3
Query: 30 ECADTGDDCSSKTGEDCTNGEVLEKCPKSCHLCGD-------CADSRPDCA 161
ECA G +C + TGE C +G KC + C D C+ + +CA
Sbjct: 14 ECACKGKECCT-TGECCKDGTCCGKCTNAACKCADGCKCGSGCSCTEGNCA 63
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,594,368
Number of Sequences: 369166
Number of extensions: 552968
Number of successful extensions: 2203
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2192
length of database: 68,354,980
effective HSP length: 68
effective length of database: 55,793,000
effective search space used: 1673790000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)