Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_M14
(860 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P12716|ACTC_PISOC Actin, cytoplasmic 546 e-155
sp|Q93131|ACTC_BRAFL Actin, cytoplasmic (BfCA1) 546 e-155
sp|Q93129|ACTC_BRABE Actin, cytoplasmic (BbCA1) 545 e-155
sp|O17320|ACT_CRAGI Actin 545 e-155
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 545 e-155
sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cyt... 544 e-154
sp|P63260|ACTG_MOUSE Actin, cytoplasmic 2 (Gamma-actin) >gi... 544 e-154
sp|P79818|ACTB_ORYLA Actin, cytoplasmic 1 (Beta-actin) (OlCA1) 543 e-154
sp|P60712|ACTB_BOVIN Actin, cytoplasmic 1 (Beta-actin) >gi|... 543 e-154
sp|Q91ZK5|ACTB_SIGHI Actin, cytoplasmic 1 (Beta-actin) 543 e-154
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 546 bits (1407), Expect = e-155
Identities = 266/275 (96%), Positives = 273/275 (99%)
Frame = +1
Query: 7 EEDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 186
+ED+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 187 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 366
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 367 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLA 546
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAI R+DLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLA 182
Query: 547 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYE 726
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEMQTAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYE 242
Query: 727 LPDGQVITIGNERFRCPEALFQPSFLGMETAGIHE 831
LPDGQVITIGNERFRCPEALFQPSFLGME+AGIHE
Sbjct: 243 LPDGQVITIGNERFRCPEALFQPSFLGMESAGIHE 277
>sp|Q93131|ACTC_BRAFL Actin, cytoplasmic (BfCA1)
Length = 375
Score = 546 bits (1406), Expect = e-155
Identities = 265/276 (96%), Positives = 273/276 (98%)
Frame = +1
Query: 4 MEEDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 183
ME+D+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1 MEDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 184 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 363
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 364 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDL 543
QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DL
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 544 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSY 723
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSTAASSSSLEKSY 240
Query: 724 ELPDGQVITIGNERFRCPEALFQPSFLGMETAGIHE 831
ELPDGQVITIGNERFRCPE+LFQPSFLGME+ G+HE
Sbjct: 241 ELPDGQVITIGNERFRCPESLFQPSFLGMESTGVHE 276
>sp|Q93129|ACTC_BRABE Actin, cytoplasmic (BbCA1)
Length = 375
Score = 545 bits (1405), Expect = e-155
Identities = 265/276 (96%), Positives = 273/276 (98%)
Frame = +1
Query: 4 MEEDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 183
ME+D+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1 MEDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 184 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 363
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 364 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDL 543
QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DL
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 544 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSY 723
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240
Query: 724 ELPDGQVITIGNERFRCPEALFQPSFLGMETAGIHE 831
ELPDGQVITIGNERFRCPE+LFQPSFLGME+ G+HE
Sbjct: 241 ELPDGQVITIGNERFRCPESLFQPSFLGMESTGVHE 276
>sp|O17320|ACT_CRAGI Actin
Length = 376
Score = 545 bits (1404), Expect = e-155
Identities = 266/275 (96%), Positives = 273/275 (99%)
Frame = +1
Query: 7 EEDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 186
+EDIAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 187 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 366
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 367 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLA 546
IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DLA
Sbjct: 123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIMRLDLA 182
Query: 547 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYE 726
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYE 242
Query: 727 LPDGQVITIGNERFRCPEALFQPSFLGMETAGIHE 831
LPDGQVITIGNERFRCPEA+FQPSFLGME++GIHE
Sbjct: 243 LPDGQVITIGNERFRCPEAMFQPSFLGMESSGIHE 277
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 545 bits (1403), Expect = e-155
Identities = 265/275 (96%), Positives = 272/275 (98%)
Frame = +1
Query: 7 EEDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 186
+ED+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 187 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 366
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 367 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLA 546
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI R+DLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 182
Query: 547 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYE 726
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEMQTA SSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYE 242
Query: 727 LPDGQVITIGNERFRCPEALFQPSFLGMETAGIHE 831
LPDGQVITIGNERFRCPEALFQPSFLGME AGIHE
Sbjct: 243 LPDGQVITIGNERFRCPEALFQPSFLGMEAAGIHE 277
>sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cytoplasmic beta actin)
Length = 375
Score = 544 bits (1402), Expect = e-154
Identities = 265/276 (96%), Positives = 273/276 (98%)
Frame = +1
Query: 4 MEEDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 183
ME+DIAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1 MEDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 184 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 363
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 364 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDL 543
QIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI R+DL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Query: 544 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSY 723
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240
Query: 724 ELPDGQVITIGNERFRCPEALFQPSFLGMETAGIHE 831
ELPDGQVITIGNERFRCPEALFQPSFLGME+ GIHE
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 276
>sp|P63260|ACTG_MOUSE Actin, cytoplasmic 2 (Gamma-actin)
sp|P63259|ACTG_RAT Actin, cytoplasmic 2 (Gamma-actin)
sp|P63257|ACTG_TRIVU Actin, cytoplasmic 2 (Gamma-actin)
sp|P63261|ACTG_HUMAN Actin, cytoplasmic 2 (Gamma-actin)
sp|P63258|ACTG_BOVIN Actin, cytoplasmic 2 (Gamma-actin)
Length = 375
Score = 544 bits (1402), Expect = e-154
Identities = 266/276 (96%), Positives = 273/276 (98%)
Frame = +1
Query: 4 MEEDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 183
MEE+IAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 184 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 363
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 364 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDL 543
QIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI R+DL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Query: 544 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSY 723
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240
Query: 724 ELPDGQVITIGNERFRCPEALFQPSFLGMETAGIHE 831
ELPDGQVITIGNERFRCPEALFQPSFLGME+ GIHE
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 276
>sp|P79818|ACTB_ORYLA Actin, cytoplasmic 1 (Beta-actin) (OlCA1)
Length = 375
Score = 543 bits (1400), Expect = e-154
Identities = 264/276 (95%), Positives = 273/276 (98%)
Frame = +1
Query: 4 MEEDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 183
M++DIAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 184 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 363
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 120
Query: 364 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDL 543
QIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI R+DL
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Query: 544 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSY 723
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY 240
Query: 724 ELPDGQVITIGNERFRCPEALFQPSFLGMETAGIHE 831
ELPDGQVITIGNERFRCPEALFQPSFLGME+ GIHE
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 276
>sp|P60712|ACTB_BOVIN Actin, cytoplasmic 1 (Beta-actin)
sp|P60713|ACTB_SHEEP Actin, cytoplasmic 1 (Beta-actin)
sp|Q5R1X3|ACTB_PANTR Actin, cytoplasmic 1 (Beta-actin)
sp|P60710|ACTB_MOUSE Actin, cytoplasmic 1 (Beta-actin)
sp|Q711N9|ACTB_MESAU Actin, cytoplasmic 1 (Beta-actin)
sp|P60708|ACTB_HORSE Actin, cytoplasmic 1 (Beta-actin)
sp|Q76N69|ACTB_CERAE Actin, cytoplasmic 1 (Beta-actin)
sp|Q71FK5|ACTB_CAVPO Actin, cytoplasmic 1 (Beta-actin)
sp|P60707|ACTB_TRIVU Actin, cytoplasmic 1 (Beta-actin)
sp|P60711|ACTB_RAT Actin, cytoplasmic 1 (Beta-actin)
sp|P60709|ACTB_HUMAN Actin, cytoplasmic 1 (Beta-actin)
sp|P60706|ACTB_CHICK Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 543 bits (1399), Expect = e-154
Identities = 264/276 (95%), Positives = 273/276 (98%)
Frame = +1
Query: 4 MEEDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 183
M++DIAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 184 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 363
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 364 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDL 543
QIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI R+DL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Query: 544 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSY 723
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240
Query: 724 ELPDGQVITIGNERFRCPEALFQPSFLGMETAGIHE 831
ELPDGQVITIGNERFRCPEALFQPSFLGME+ GIHE
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 276
>sp|Q91ZK5|ACTB_SIGHI Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 543 bits (1399), Expect = e-154
Identities = 264/276 (95%), Positives = 273/276 (98%)
Frame = +1
Query: 4 MEEDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 183
M++DIAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 184 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 363
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 364 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDL 543
QIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI R+DL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Query: 544 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSY 723
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240
Query: 724 ELPDGQVITIGNERFRCPEALFQPSFLGMETAGIHE 831
ELPDGQVITIGNERFRCPEALFQPSFLGME+ GIHE
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 276
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,618,287
Number of Sequences: 369166
Number of extensions: 2086127
Number of successful extensions: 6504
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6345
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8534739105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)