Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_K23
(694 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P42577|FRIS_LYMST Soma ferritin 69 2e-11
sp|P17663|FRIH1_XENLA Ferritin heavy chain 1 69 2e-11
sp|P49947|FRIM_SALSA Ferritin, middle subunit (Ferritin M) 69 2e-11
sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17) 68 2e-11
sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) ... 67 6e-11
sp|P07229|FRI1_RANCA Ferritin, higher subunit (Ferritin H) 66 1e-10
sp|Q7SXA5|FRIL_XENLA Ferritin light chain, oocyte isoform (... 66 1e-10
sp|P25915|FRIH_RABIT Ferritin heavy chain (Ferritin H subunit) 65 2e-10
sp|P08267|FRIH_CHICK Ferritin heavy chain (Ferritin H subunit) 65 2e-10
sp|P29389|FRIH_CRIGR Ferritin heavy chain (Ferritin H subunit) 64 4e-10
>sp|P42577|FRIS_LYMST Soma ferritin
Length = 174
Score = 68.6 bits (166), Expect = 2e-11
Identities = 40/146 (27%), Positives = 72/146 (49%)
Frame = +3
Query: 51 SKLINRMLHLCQGYRQVEIRCLTDEVNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKV 230
++ IN L+ Y+ + D+V L F + F+ + E + E+L+++Q RG ++
Sbjct: 19 NRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRI 78
Query: 231 TWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILR 410
D+K + E E Q L LEK V+Q+ L L KL D + FL+ +
Sbjct: 79 VLQDIKKPDRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEE 138
Query: 411 QIKVIRKRASQLRNLRRSGDDVTPFL 488
Q+K I++ + + NL+R G + ++
Sbjct: 139 QVKSIKELSDYITNLKRVGPGLGEYI 164
>sp|P17663|FRIH1_XENLA Ferritin heavy chain 1
Length = 176
Score = 68.6 bits (166), Expect = 2e-11
Identities = 40/139 (28%), Positives = 68/139 (48%)
Frame = +3
Query: 51 SKLINRMLHLCQGYRQVEIRCLTDEVNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKV 230
++++N ++ Y + D+V L + F+ E + E+ +++Q RG +V
Sbjct: 18 NRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRV 77
Query: 231 TWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILR 410
D+K E E E Q L LEK V+Q L L KLA +K+D L FL+ +
Sbjct: 78 VLQDIKKPERDEWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLCDFLESEYLEE 137
Query: 411 QIKVIRKRASQLRNLRRSG 467
Q+K +++ + NL+R G
Sbjct: 138 QVKAMKELGDYITNLKRLG 156
>sp|P49947|FRIM_SALSA Ferritin, middle subunit (Ferritin M)
Length = 176
Score = 68.6 bits (166), Expect = 2e-11
Identities = 44/156 (28%), Positives = 74/156 (47%)
Frame = +3
Query: 51 SKLINRMLHLCQGYRQVEIRCLTDEVNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKV 230
+++IN + Y + D+V L F F+ + E + ++L+ FQ RG ++
Sbjct: 18 NRMINMEMFASYTYTSMAFYFSRDDVALPGFAHFFKENSEEEREHADKLLSFQNKRGGRI 77
Query: 231 TWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILR 410
D+K E E E Q L LEK+V+Q L L K+A +K+D L FL+ +
Sbjct: 78 LLQDIKKPERDEWGNGLEAMQCALQLEKNVNQALLDLHKIASDKVDPHLCDFLETHYLNE 137
Query: 411 QIKVIRKRASQLRNLRRSGDDVTPFLTSSLHARHEI 518
Q++ I+K + NL + D V + L +H +
Sbjct: 138 QVEAIKKLGDHITNLTKM-DAVKNKMAEYLFDKHTL 172
>sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17)
Length = 176
Score = 68.2 bits (165), Expect = 2e-11
Identities = 40/139 (28%), Positives = 68/139 (48%)
Frame = +3
Query: 51 SKLINRMLHLCQGYRQVEIRCLTDEVNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKV 230
++++N ++ Y + D+V L + F+ E + E+ +++Q RG +V
Sbjct: 18 NRMVNMEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRV 77
Query: 231 TWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILR 410
D+K E E E Q L LEK V+Q L L KLA +K+D L FL+ +
Sbjct: 78 VLQDIKKPERDEWGNTLEATQAALQLEKTVNQALLDLHKLASDKVDAHLCDFLESEYLEE 137
Query: 411 QIKVIRKRASQLRNLRRSG 467
Q+K +++ + NL+R G
Sbjct: 138 QVKAMKQLGDYITNLKRLG 156
>sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) (Ferritin X) (Ferritin H')
Length = 176
Score = 66.6 bits (161), Expect = 6e-11
Identities = 42/139 (30%), Positives = 68/139 (48%)
Frame = +3
Query: 51 SKLINRMLHLCQGYRQVEIRCLTDEVNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKV 230
++++N L+ Y + D+V L + F+ E + E+ +++Q RG +V
Sbjct: 18 NRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRV 77
Query: 231 TWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILR 410
D+K E E E Q L LEK V+Q L L KLA +K+D L FL+ +
Sbjct: 78 VLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLESEYLEE 137
Query: 411 QIKVIRKRASQLRNLRRSG 467
Q+K I++ + NL+R G
Sbjct: 138 QVKDIKRIGDFITNLKRLG 156
>sp|P07229|FRI1_RANCA Ferritin, higher subunit (Ferritin H)
Length = 176
Score = 65.9 bits (159), Expect = 1e-10
Identities = 40/139 (28%), Positives = 68/139 (48%)
Frame = +3
Query: 51 SKLINRMLHLCQGYRQVEIRCLTDEVNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKV 230
++++N L+ Y + D++ L + + F+ E + E+L++ Q RG ++
Sbjct: 18 NRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREHAEKLMKDQNKRGGRI 77
Query: 231 TWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILR 410
DVK E E E Q L LEK V+Q L L K+ +K+D L FL+ +
Sbjct: 78 VLQDVKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCDFLETEYLEE 137
Query: 411 QIKVIRKRASQLRNLRRSG 467
Q+K I++ + NL+R G
Sbjct: 138 QVKSIKQLGDYITNLKRLG 156
>sp|Q7SXA5|FRIL_XENLA Ferritin light chain, oocyte isoform (B-ferritin) (XeBF) (GV-LCH)
Length = 177
Score = 65.9 bits (159), Expect = 1e-10
Identities = 35/114 (30%), Positives = 60/114 (52%)
Frame = +3
Query: 120 DEVNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKVTWYDVKPVEHIETPKPFEMFQTI 299
D+V L F + F + + + + E+ ++FQ RG +V DVK + E + +
Sbjct: 43 DDVALSKFSKFFRELSEKKRDHAEDFLKFQNKRGGRVVLQDVKKPDDDEWGNGTKAMEVA 102
Query: 300 LNLEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILRQIKVIRKRASQLRNLRR 461
LNLEK ++Q L L K+A + D + +L+ + ++K+I+K L NLRR
Sbjct: 103 LNLEKSINQAVLDLHKIATDHTDPHMQDYLEHEFLEEEVKLIKKLGDHLTNLRR 156
>sp|P25915|FRIH_RABIT Ferritin heavy chain (Ferritin H subunit)
Length = 164
Score = 65.1 bits (157), Expect = 2e-10
Identities = 40/139 (28%), Positives = 69/139 (49%)
Frame = +3
Query: 51 SKLINRMLHLCQGYRQVEIRCLTDEVNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKV 230
++ IN L+ Y + D+V L +F + F E + E+L++ Q RG ++
Sbjct: 3 NRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRI 62
Query: 231 TWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILR 410
D+K E+ + + L+LEK V+Q+ L L KLA +K D L F++ +
Sbjct: 63 FLQDIKKPEYDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNE 122
Query: 411 QIKVIRKRASQLRNLRRSG 467
Q+K I++ + NLR+ G
Sbjct: 123 QVKSIKELGDHVTNLRKMG 141
>sp|P08267|FRIH_CHICK Ferritin heavy chain (Ferritin H subunit)
Length = 180
Score = 64.7 bits (156), Expect = 2e-10
Identities = 40/139 (28%), Positives = 69/139 (49%)
Frame = +3
Query: 51 SKLINRMLHLCQGYRQVEIRCLTDEVNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKV 230
++ IN L+ Y + D+V L +F + F E + E+L++ Q RG ++
Sbjct: 21 NRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRI 80
Query: 231 TWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVILR 410
D+K + + + L+LEK+V+Q+ L L KLA EK D L F++ +
Sbjct: 81 FLQDIKKPDRDDWENGLTAMECALHLEKNVNQSLLELHKLATEKNDPHLCDFIETHYLDE 140
Query: 411 QIKVIRKRASQLRNLRRSG 467
Q+K I++ + NLR+ G
Sbjct: 141 QVKAIKQLGDHVTNLRKMG 159
>sp|P29389|FRIH_CRIGR Ferritin heavy chain (Ferritin H subunit)
Length = 186
Score = 63.9 bits (154), Expect = 4e-10
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Frame = +3
Query: 60 INRM--LHLCQGYRQVEIRCL--TDEVNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 227
INR L L Y + + C D+V L +F + F E + E+L++ Q RG +
Sbjct: 26 INRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGR 85
Query: 228 VTWYDVKPVEHIETPKPFEMFQTILNLEKDVHQNTLRLCKLACEKLDVDLTSFLKDRVIL 407
+ D+K + + + L+LEK V+Q+ L L KLA +K D L F++ +
Sbjct: 86 IFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLN 145
Query: 408 RQIKVIRKRASQLRNLRRSG 467
Q+K I++ + NLR+ G
Sbjct: 146 EQVKSIKELGDHVTNLRKMG 165
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,217,168
Number of Sequences: 369166
Number of extensions: 1110645
Number of successful extensions: 2968
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2968
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5976365205
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)