Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_K11
(480 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P91800|TCTP_SCHJA Translationally-controlled tumor prote... 146 3e-35
sp|Q10344|TCTP_SCHPO Translationally-controlled tumor prote... 140 2e-33
sp|Q98SJ7|TCTP_LABRO Translationally-controlled tumor prote... 136 2e-32
sp|Q9DGK4|TCTP_BRARE Translationally-controlled tumor prote... 135 5e-32
sp|P13693|TCTP_HUMAN Translationally-controlled tumor prote... 127 1e-29
sp|Q5E984|TCTP_BOVIN Translationally-controlled tumor prote... 127 1e-29
sp|P43348|TCTP_RABIT Translationally-controlled tumor prote... 127 1e-29
sp|Q7ZYF2|TCTP_XENLA Translationally-controlled tumor prote... 126 2e-29
sp|P43347|TCTP_CHICK Translationally-controlled tumor prote... 126 2e-29
sp|Q95VY2|TCTP_BRABE Translationally-controlled tumor prote... 125 4e-29
>sp|P91800|TCTP_SCHJA Translationally-controlled tumor protein homolog (TCTP)
Length = 169
Score = 146 bits (368), Expect = 3e-35
Identities = 66/142 (46%), Positives = 96/142 (67%)
Frame = +2
Query: 2 VYEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTTETQIDIVYANRLVEISYGKKEYT 181
VYE D IT+ NG+ I N S + EE SD+TE ID+V+A+RLV S+ KK Y
Sbjct: 27 VYEVDANFITVSNGLDSKLIAANPSGEEGQEEVSDSTERVIDLVHASRLVSTSFDKKSYR 86
Query: 182 TYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNFKEYKFYTGETMNPEAMVILC 361
Y+K Y+K I + L+ +NP+RV++F++ +Y+ + KNF +Y+ Y GE+MNP+ MV L
Sbjct: 87 AYLKGYLKAIKERLQKENPERVSIFESRINEYMVNVFKNFDDYEHYIGESMNPDGMVALM 146
Query: 362 NYREDQITPYFIVFKDGIEEEK 427
N+RE+ +TPYF+ KDG+ EEK
Sbjct: 147 NFRENGVTPYFVFLKDGLIEEK 168
>sp|Q10344|TCTP_SCHPO Translationally-controlled tumor protein homolog (TCTP) (p23fyp)
Length = 168
Score = 140 bits (352), Expect = 2e-33
Identities = 74/142 (52%), Positives = 96/142 (67%)
Frame = +2
Query: 2 VYEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTTETQIDIVYANRLVEISYGKKEYT 181
VYE D + +T+K G D IG N SA+ +E + TET ++VY+ RL S+ KK Y
Sbjct: 27 VYEADCQMVTVKQGGDVD-IGANPSAEDAEENAEEGTETVNNLVYSFRLSPTSFDKKSYM 85
Query: 182 TYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNFKEYKFYTGETMNPEAMVILC 361
+YIK YMK I L+ NP+RV VF+ NA +V +IL NFK+Y FY GE+M+P+AMV+L
Sbjct: 86 SYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLM 145
Query: 362 NYREDQITPYFIVFKDGIEEEK 427
NYRED ITPY I FKDG+ EK
Sbjct: 146 NYREDGITPYMIFFKDGLVSEK 167
>sp|Q98SJ7|TCTP_LABRO Translationally-controlled tumor protein (TCTP)
Length = 171
Score = 136 bits (343), Expect = 2e-32
Identities = 70/142 (49%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
Frame = +2
Query: 8 EFDGKNITIKNGIPEDK-IGGNKSADVDDEEYSDTTETQIDIVYANRLVEISYGKKEYTT 184
E +GK I+ G +D IGGN SA+V DE TT + +DIV ++L E SY KK YT
Sbjct: 30 EVEGKMISRAEGEIDDALIGGNASAEVQDEGCESTTVSGVDIVLNHKLQETSYDKKSYTA 89
Query: 185 YIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNFKEYKFYTGETMNPEAMVILCN 364
YIK+YMK + L+ PDRV+ F NA V +IL N K ++F+TGE+MNP+ M+ L +
Sbjct: 90 YIKDYMKAVKAKLQEVAPDRVDPFMANAPAEVKKILGNIKNFQFFTGESMNPDGMIGLLD 149
Query: 365 YREDQITPYFIVFKDGIEEEKC 430
+RED +TPY + FKDG+E EKC
Sbjct: 150 FREDGVTPYMLFFKDGLEIEKC 171
>sp|Q9DGK4|TCTP_BRARE Translationally-controlled tumor protein (TCTP)
Length = 171
Score = 135 bits (340), Expect = 5e-32
Identities = 70/142 (49%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
Frame = +2
Query: 8 EFDGKNITIKNGIPEDK-IGGNKSADVDDEEYSDTTETQIDIVYANRLVEISYGKKEYTT 184
E +GK IT G +D IGGN SA+V DE T+ + +DIV ++L E SY KK YT
Sbjct: 30 EVEGKMITRAEGDIDDALIGGNASAEVADEGCDSTSVSGVDIVLNHKLQETSYDKKSYTA 89
Query: 185 YIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNFKEYKFYTGETMNPEAMVILCN 364
YIK+YMK + L+ P+RV+ F NA V +IL N K ++F+TGE+MNP+ M+ L +
Sbjct: 90 YIKDYMKAVKAKLQESAPNRVDPFMANAPAEVKKILGNIKNFQFFTGESMNPDGMIGLLD 149
Query: 365 YREDQITPYFIVFKDGIEEEKC 430
+RED +TPY I FKDG+E EKC
Sbjct: 150 FREDGVTPYMIFFKDGLEIEKC 171
>sp|P13693|TCTP_HUMAN Translationally-controlled tumor protein (TCTP) (p23)
(Histamine-releasing factor) (HRF) (Fortilin)
sp|P61288|TCTP_PIG Translationally-controlled tumor protein (TCTP)
Length = 172
Score = 127 bits (320), Expect = 1e-29
Identities = 67/143 (46%), Positives = 92/143 (64%), Gaps = 2/143 (1%)
Frame = +2
Query: 8 EFDGKNITIKNG-IPEDKIGGNKSADVDDEEYSDTTE-TQIDIVYANRLVEISYGKKEYT 181
E +GK ++ G I + IGGN SA+ + E +++T T +DIV + L E S+ K+ Y
Sbjct: 30 EVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYK 89
Query: 182 TYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNFKEYKFYTGETMNPEAMVILC 361
YIK+YMK I L+ + P+RV F T A + + IL NFK Y+F+ GE MNP+ MV L
Sbjct: 90 KYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALL 149
Query: 362 NYREDQITPYFIVFKDGIEEEKC 430
+YRED +TPY I FKDG+E EKC
Sbjct: 150 DYREDGVTPYMIFFKDGLEMEKC 172
>sp|Q5E984|TCTP_BOVIN Translationally-controlled tumor protein (TCTP)
Length = 172
Score = 127 bits (320), Expect = 1e-29
Identities = 67/143 (46%), Positives = 92/143 (64%), Gaps = 2/143 (1%)
Frame = +2
Query: 8 EFDGKNITIKNG-IPEDKIGGNKSADVDDEEYSDTTE-TQIDIVYANRLVEISYGKKEYT 181
E +GK ++ G I + IGGN SA+ + E +++T T +DIV + L E S+ K+ Y
Sbjct: 30 EVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYK 89
Query: 182 TYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNFKEYKFYTGETMNPEAMVILC 361
YIK+YMK I L+ + P+RV F T A + + IL NFK Y+F+ GE MNP+ MV L
Sbjct: 90 KYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALL 149
Query: 362 NYREDQITPYFIVFKDGIEEEKC 430
+YRED +TPY I FKDG+E EKC
Sbjct: 150 DYREDGVTPYMIFFKDGLEMEKC 172
>sp|P43348|TCTP_RABIT Translationally-controlled tumor protein (TCTP)
Length = 172
Score = 127 bits (320), Expect = 1e-29
Identities = 67/143 (46%), Positives = 92/143 (64%), Gaps = 2/143 (1%)
Frame = +2
Query: 8 EFDGKNITIKNG-IPEDKIGGNKSADVDDEEYSDTTE-TQIDIVYANRLVEISYGKKEYT 181
E +GK ++ G I + IGGN SA+ + E +++T T +DIV + L E S+ K+ Y
Sbjct: 30 EVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYK 89
Query: 182 TYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNFKEYKFYTGETMNPEAMVILC 361
YIK+YMK I L+ + P+RV F T A + + IL NFK Y+FY GE MNP+ MV L
Sbjct: 90 KYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFYIGENMNPDGMVALL 149
Query: 362 NYREDQITPYFIVFKDGIEEEKC 430
+YRED +TP+ I FKDG+E EKC
Sbjct: 150 DYREDGVTPFMIFFKDGLEMEKC 172
>sp|Q7ZYF2|TCTP_XENLA Translationally-controlled tumor protein (TCTP)
Length = 172
Score = 126 bits (317), Expect = 2e-29
Identities = 67/143 (46%), Positives = 93/143 (65%), Gaps = 2/143 (1%)
Frame = +2
Query: 8 EFDGKNITIKNGIPEDK-IGGNKSADVDDEEYSDTTETQ-IDIVYANRLVEISYGKKEYT 181
E +GK I + G +D IGGN SA+ +++ ++ T +DIV ++L E + K Y
Sbjct: 30 EVEGKVIQREEGAIDDALIGGNASAEFQEDDVGGSSLTSGVDIVMNHKLQETGFTKDSYK 89
Query: 182 TYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNFKEYKFYTGETMNPEAMVILC 361
YIK+Y+K++ L+ NP+RVN F AQ+ V +IL NFK Y+FYTGE MNP+ MV L
Sbjct: 90 NYIKDYVKQLKAHLEKTNPERVNTFMKGAQETVKKILGNFKNYQFYTGERMNPDGMVGLL 149
Query: 362 NYREDQITPYFIVFKDGIEEEKC 430
+YRED ITP+ I FKDG+ EKC
Sbjct: 150 DYREDGITPFMIFFKDGLIIEKC 172
>sp|P43347|TCTP_CHICK Translationally-controlled tumor protein (TCTP) (p23) (pCHK23)
Length = 172
Score = 126 bits (317), Expect = 2e-29
Identities = 67/143 (46%), Positives = 90/143 (62%), Gaps = 2/143 (1%)
Frame = +2
Query: 8 EFDGKNITIKNG-IPEDKIGGNKSADVDDEEYSDTTE-TQIDIVYANRLVEISYGKKEYT 181
E +GK +T G I + IGGN SA+ + E ++ T T +DIV + L E S+ K+ Y
Sbjct: 30 EVEGKMVTRTEGQIDDSLIGGNASAEGPEGEGTEATVITGVDIVINHHLQETSFTKESYK 89
Query: 182 TYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNFKEYKFYTGETMNPEAMVILC 361
YIK+YMK I L+ P+RV F T A + + IL NFK Y+F+ GE MNP+ MV L
Sbjct: 90 KYIKDYMKAIKARLEEHKPERVKPFMTGAAEQIKHILANFKNYQFFVGENMNPDGMVALL 149
Query: 362 NYREDQITPYFIVFKDGIEEEKC 430
++RED +TPY I FKDG+E EKC
Sbjct: 150 DFREDGVTPYMIFFKDGLEIEKC 172
>sp|Q95VY2|TCTP_BRABE Translationally-controlled tumor protein (TCTP)
Length = 169
Score = 125 bits (315), Expect = 4e-29
Identities = 63/141 (44%), Positives = 88/141 (62%)
Frame = +2
Query: 5 YEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTTETQIDIVYANRLVEISYGKKEYTT 184
YE +GK T K GI E IGGN SA+ E ++ T +IV A RL E + K +Y
Sbjct: 28 YELEGKITTEKGGIDESAIGGNASAEDAVEGLEESGTTGCNIVIAQRLQETQFTKAQYKV 87
Query: 185 YIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEILKNFKEYKFYTGETMNPEAMVILCN 364
YIK+Y K++L+ L P+RV+ FK + + ++ NFK ++F+TGE M+ + MV L +
Sbjct: 88 YIKDYSKKVLEYLTKNKPERVDGFKAASAAGMKRVMGNFKNWQFFTGEKMDQDGMVALMD 147
Query: 365 YREDQITPYFIVFKDGIEEEK 427
YRED TPY + FKDG+EEEK
Sbjct: 148 YREDGKTPYMLFFKDGLEEEK 168
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,222,271
Number of Sequences: 369166
Number of extensions: 1140407
Number of successful extensions: 3472
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3449
length of database: 68,354,980
effective HSP length: 102
effective length of database: 49,512,010
effective search space used: 2822184570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)