Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_I06
(323 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P26624|GST28_SCHJA Glutathione S-transferase 28 kDa (GST... 50 1e-06
sp|P09792|GST28_SCHMA Glutathione S-transferase 28 kDa (GST... 46 2e-05
sp|P30113|GST28_SCHBO Glutathione S-transferase 28 kDa (GST... 45 4e-05
sp|P30114|GST28_SCHHA Glutathione S-transferase 28 kDa (GST... 45 5e-05
sp|P46088|GST_OMMSL Glutathione S-transferase (GST class-si... 43 3e-04
sp|Q00285|GSTMU_CRILO Glutathione S-transferase Y1 (Chain 3... 32 0.45
sp|P91252|GST6_CAEEL Probable glutathione S-transferase 6 (... 31 0.77
sp|Q9KPL2|YN55_VIBCH Hypothetical UPF0246 protein VC2355 31 1.00
sp|P54422|GGT_BACSU Gamma-glutamyltranspeptidase precursor ... 31 1.00
sp|P63186|GGT_BACNA Gamma-glutamyltranspeptidase precursor ... 31 1.00
>sp|P26624|GST28_SCHJA Glutathione S-transferase 28 kDa (GST 28) (SJ28 antigen) (GST
class-mu)
Length = 206
Score = 50.4 bits (119), Expect = 1e-06
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 EYYLIERAIGQMVDVLEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKES--GF 176
EYY+IE+ IGQ+ DV +K P E+KE + E + L+++ +KES
Sbjct: 86 EYYIIEKMIGQVEDVESEYHKTLIKPPEEKEKISKEILNGKVPILLQAICETLKESTGNL 145
Query: 177 FVGEKITLAELFFVVLTDYLEKLPK 251
VG+K+TLA++ + D++ L K
Sbjct: 146 TVGDKVTLADVVLIASIDHITDLDK 170
>sp|P09792|GST28_SCHMA Glutathione S-transferase 28 kDa (GST 28) (SM28 antigen)
(Protective 28 kDa antigen) (GST class-mu)
Length = 211
Score = 46.2 bits (108), Expect = 2e-05
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 EYYLIERAIGQMVDVLEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKES--GF 176
EYY +E+ IGQ DV +K P+E+KE + E + L + +K S
Sbjct: 91 EYYSVEKLIGQAEDVEHEYHKTLMKPQEEKEKITKEILNGKVPVLLNMICESLKGSTGKL 150
Query: 177 FVGEKITLAELFFVVLTDYLEKLPK 251
VG+K+TLA+L + + D++ L K
Sbjct: 151 AVGDKVTLADLVLIAVIDHVTDLDK 175
>sp|P30113|GST28_SCHBO Glutathione S-transferase 28 kDa (GST 28) (GST class-mu)
Length = 211
Score = 45.4 bits (106), Expect = 4e-05
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 EYYLIERAIGQMVDVLEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKES--GF 176
EYY +E+ IGQ D+ YK PEE+K+ + E + L + +K S
Sbjct: 91 EYYNVEKLIGQAEDLEHEYYKTLMKPEEEKQKIIKEILNGKVPVLLDIICESLKASTGKL 150
Query: 177 FVGEKITLAELFFVVLTDYLEKLPK 251
VG+K+TLA+L + + D++ L K
Sbjct: 151 AVGDKVTLADLVLIAVIDHVTDLDK 175
>sp|P30114|GST28_SCHHA Glutathione S-transferase 28 kDa (GST 28) (GST class-mu)
Length = 211
Score = 45.1 bits (105), Expect = 5e-05
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 EYYLIERAIGQMVDVLEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKES--GF 176
EYY +E+ IGQ+ D+ +K PEE+K+ + E + L + +K S
Sbjct: 91 EYYNVEKLIGQVEDLEHEYHKTLMKPEEEKQKITKEILNGKVPVLLDIICESLKASTGKL 150
Query: 177 FVGEKITLAELFFVVLTDYLEKLPK 251
VG+K+TLA+L + + D++ L K
Sbjct: 151 AVGDKVTLADLVLIAVIDHVTDLDK 175
>sp|P46088|GST_OMMSL Glutathione S-transferase (GST class-sigma)
Length = 203
Score = 42.7 bits (99), Expect = 3e-04
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +3
Query: 3 EYYLIERAIGQMVDVLEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKESG--- 173
E Y ++ + D+ + KI FAPE KE ++ + + R LEG + +G
Sbjct: 84 EKYRVDEITETLQDIFNDVVKIKFAPEAAKEAVQQNYEKSCKR-LAPFLEGLLVSNGGGD 142
Query: 174 -FFVGEKITLAELF-FVVLTDYLEKLPKLYDDFSKL 275
FFVG +TLA+L +V L L+ P+L D K+
Sbjct: 143 GFFVGNSMTLADLHCYVALEVPLKHTPELLKDCPKI 178
>sp|Q00285|GSTMU_CRILO Glutathione S-transferase Y1 (Chain 3) (GST class-mu)
Length = 218
Score = 32.0 bits (71), Expect = 0.45
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 33 QMVDVLEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKESGFFVGEKITLAE-L 209
Q +D + + + P+ +K+ + EF+ T + +K F+ + +F G+K+TL L
Sbjct: 103 QAMDTRMQLIMLCYNPDFEKQ--KPEFLKTIP-EKMKMYSEFLGKRPWFAGDKVTLCGFL 159
Query: 210 FFVVLTDYLEKLPKLYDDFSKLKN 281
+ VL Y PK D F LK+
Sbjct: 160 AYDVLDQYQMFEPKCLDPFPNLKD 183
>sp|P91252|GST6_CAEEL Probable glutathione S-transferase 6 (GST class-sigma)
Length = 206
Score = 31.2 bits (69), Expect = 0.77
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 90 KEDLRTEFVTTSGRDNLKSLEGFI--KESGFFVGEKITLAELFFVV-LTDYLEKLPKLYD 260
K+ LRT+ + + N + E + SGFFVG +T +L + D L+K + +
Sbjct: 117 KDQLRTDVFVPAFKKNFEFFENILASNHSGFFVGNSLTWVDLLISQHVQDILDKDLAVVE 176
Query: 261 DFSKL 275
+F K+
Sbjct: 177 EFKKV 181
>sp|Q9KPL2|YN55_VIBCH Hypothetical UPF0246 protein VC2355
Length = 257
Score = 30.8 bits (68), Expect = 1.00
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 42 DVLEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKESGFFVGEKITLAELFF 215
D G YKI +K + ++ + ++K LEGF +FV + T EL F
Sbjct: 195 DAKNGQYKIISFFAKKARGMMARYIIENRIKSVKDLEGFNTAGYYFVASESTPTELVF 252
>sp|P54422|GGT_BACSU Gamma-glutamyltranspeptidase precursor [Contains:
Gamma-glutamyltranspeptidase large chain;
Gamma-glutamyltranspeptidase small chain]
Length = 587
Score = 30.8 bits (68), Expect = 1.00
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -2
Query: 184 PTKNPLSLMKPSRLFKLSRPDVVTNSVRRSSFFSSGAK*ILY 59
P K PLS M P+ LFK +P + S ++ SS + ILY
Sbjct: 458 PNKRPLSSMTPTILFKDDKPVLTVGSPGGATIISSVLQTILY 499
>sp|P63186|GGT_BACNA Gamma-glutamyltranspeptidase precursor [Contains:
Gamma-glutamyltranspeptidase large chain;
Gamma-glutamyltranspeptidase small chain]
Length = 587
Score = 30.8 bits (68), Expect = 1.00
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -2
Query: 184 PTKNPLSLMKPSRLFKLSRPDVVTNSVRRSSFFSSGAK*ILY 59
P K PLS M P+ LFK +P + S ++ SS + ILY
Sbjct: 458 PNKRPLSSMTPTILFKDDKPVLTVGSPGGATIISSVLQTILY 499
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,628,212
Number of Sequences: 369166
Number of extensions: 583402
Number of successful extensions: 2099
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2095
length of database: 68,354,980
effective HSP length: 76
effective length of database: 54,315,120
effective search space used: 1683768720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)