Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_H10
(385 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P06882|THYG_RAT Thyroglobulin precursor 57 1e-08
sp|O08710|THYG_MOUSE Thyroglobulin precursor 56 2e-08
sp|P01267|THYG_BOVIN Thyroglobulin precursor 56 3e-08
sp|P81439|EQST_ACTEQ Equistatin 51 7e-07
sp|P01266|THYG_HUMAN Thyroglobulin precursor 51 9e-07
sp|P31226|SAX_RANCA Saxiphilin precursor (SAX) 49 5e-06
sp|O88322|NID2_MOUSE Nidogen-2 precursor (NID-2) (Entactin-2) 46 2e-05
sp|Q14112|NID2_HUMAN Nidogen-2 precursor (NID-2) (Osteonido... 45 5e-05
sp|Q9BQ16|TICN3_HUMAN Testican-3 precursor (SPARC/osteonect... 44 9e-05
sp|Q5RD69|TICN3_PONPY Testican-3 precursor (SPARC/osteonect... 44 9e-05
>sp|P06882|THYG_RAT Thyroglobulin precursor
Length = 2768
Score = 57.0 bits (136), Expect = 1e-08
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGK-TCKCAKDKDDYHKL--- 208
P C G Y+ +QC CWCV+ G E++G + + + + KC K + L
Sbjct: 618 PSCTAEGSYEDIQCYAGECWCVNSQGKEVEG--SRVSGGHPRCPTKCEKQRAQMQNLAGA 675
Query: 209 HIRGKMFF---CDVRGNYEKAQCLGSVCFCADENGKQIGSTTVHIAQ 340
G FF C G + QC S C+C D G+ I T I +
Sbjct: 676 QPAGSSFFVPTCTSEGYFLPVQCFNSECYCVDAEGQVIPGTQSTIGE 722
Score = 47.8 bits (112), Expect = 8e-06
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 14/112 (12%)
Frame = +2
Query: 29 DVTFPFCEDTGMYKPVQCV--GAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDYH 202
D P C + G ++ VQC G +CWCVD G E+ G + G+ C H
Sbjct: 47 DEYVPQCSEDGSFQTVQCQNDGQSCWCVDSDGTEVPG-----SRQLGRPTACL-SFCQLH 100
Query: 203 KLHIRGKMFF----------CDVRGNYEKAQC-LGSV-CFCADENGKQIGST 322
K I + C GNY QC L V C+C D G ++ T
Sbjct: 101 KQRILLSSYINSTDALYLPQCQDSGNYAPVQCDLQQVQCWCVDTEGMEVYGT 152
Score = 39.3 bits (90), Expect = 0.003
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 41 PFCEDTGMYKPVQC-VGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDK 190
P C G Y+ VQC + CWCVD G EI G + G+ CAKD+
Sbjct: 318 PSCHRDGHYQTVQCQMERMCWCVDAQGIEIPG-----TRQQGQPLFCAKDQ 363
Score = 38.9 bits (89), Expect = 0.004
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 16/127 (12%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYI-----------TGIEKSYGKTCKCA 181
P C G ++PVQC CWCVD G+ I G + T E S A
Sbjct: 1030 PQCNTIGGWEPVQCHPGTGQCWCVDGWGELIPGSLMARSSQMPQCPTSCELSRANGLISA 1089
Query: 182 KDKDDYHKLHIRGKMF--FCDVRGNYEKAQCLGSVCFCAD-ENGKQIGSTTVHIAQLHTL 352
+ + + G +F C G Y + Q G+ +C D +G+ + + T AQ L
Sbjct: 1090 WKQAGHQRNPGPGDLFTPVCLQTGEYVRQQTSGTGAWCVDPSSGEGVPTNTNSSAQCPGL 1149
Query: 353 KCD*IKN 373
CD +K+
Sbjct: 1150 -CDALKS 1155
Score = 37.7 bits (86), Expect = 0.008
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Frame = +2
Query: 20 GAMDVTFPFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDY 199
G D+ P C TG Y Q G WCVD S E T C K +
Sbjct: 1100 GPGDLFTPVCLQTGEYVRQQTSGTGAWCVDPSSGEGVPTNTNSSAQCPGLCDALKSRVLS 1159
Query: 200 HKLHIRGKMFFCD-VRGNYEKAQC--LGSVCFCADENGKQIGSTTV 328
K+ + G C+ + G + QC C+C +G+++ T V
Sbjct: 1160 RKVGL-GYTPVCEALDGGFSPVQCDLAQGSCWCVLASGEEVPGTRV 1204
Score = 28.1 bits (61), Expect = 6.5
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 92 ACWCVDDSGDEIKG 133
+CWCVD++G E+ G
Sbjct: 898 SCWCVDEAGQELDG 911
>sp|O08710|THYG_MOUSE Thyroglobulin precursor
Length = 2766
Score = 56.2 bits (134), Expect = 2e-08
Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDYHKL---H 211
P C G Y+ +QC CWCVD G E+ G + T KC K + L
Sbjct: 618 PSCTAGGSYEDIQCYAGECWCVDSRGKELDGSRVRGGRPRCPT-KCEKQRAQMQSLASAQ 676
Query: 212 IRGKMFF---CDVRGNYEKAQCLGSVCFCADENGKQIGST 322
G FF C G + QC S C+C D G+ I T
Sbjct: 677 PAGSSFFVPTCTREGYFLPVQCFNSECYCVDTEGQVIPGT 716
Score = 45.4 bits (106), Expect = 4e-05
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCV--GAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDYHKLHI 214
P C + G ++ VQC G +CWCVD G E+ G + G+ C + + +
Sbjct: 51 PQCSEDGSFQTVQCQNDGQSCWCVDSDGREVPG-----SRQLGRPTVCLSFCQLHKQRIL 105
Query: 215 RGKMF---------FCDVRGNYEKAQC-LGSV-CFCADENGKQIGST 322
G C GNY QC L V C+C D G ++ T
Sbjct: 106 LGSYINSTDALYLPQCQDSGNYAPVQCDLQRVQCWCVDTEGMEVYGT 152
Score = 37.0 bits (84), Expect = 0.014
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 41 PFCEDTGMYKPVQC-VGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDK 190
P C G Y+ VQC CWCVD G E+ G + G+ CA D+
Sbjct: 318 PRCHRDGHYQTVQCQTEGMCWCVDAQGREVPG-----TRQQGQPPSCAADQ 363
Score = 35.8 bits (81), Expect = 0.031
Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Frame = +2
Query: 20 GAMDVTFPFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDY 199
G D+ P C TG Y Q G WCVD + E T C K +
Sbjct: 1100 GPGDLFIPVCLQTGEYVRKQTSGTGTWCVDPASGEGMPVNTNGSAQCPGLCDVLKSRALS 1159
Query: 200 HKLHIRGKMFFCD-VRGNYEKAQC--LGSVCFCADENGKQIGSTTV 328
K+ + G C+ + G + QC C+C +G+++ T V
Sbjct: 1160 RKVGL-GYSPVCEALDGAFSPVQCDLAQGSCWCVLGSGEEVPGTRV 1204
Score = 35.4 bits (80), Expect = 0.041
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 218 GKMFF--CDVRGNYEKAQCLGSVCFCADENGKQIGSTTV 328
GK F C G+YE QC C+C D GK++ + V
Sbjct: 613 GKFFVPSCTAGGSYEDIQCYAGECWCVDSRGKELDGSRV 651
Score = 35.0 bits (79), Expect = 0.053
Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 16/127 (12%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYI-----------TGIEKSYGKTCKCA 181
P C G ++PVQC CWCVD G+ I G + T E S A
Sbjct: 1030 PQCNMIGGWEPVQCHAGTGQCWCVDGRGEFIPGSLMSRSSQMPQCPTNCELSRASGLISA 1089
Query: 182 KDKDDYHKLHIRGKMFF--CDVRGNYEKAQCLGSVCFCAD-ENGKQIGSTTVHIAQLHTL 352
+ + G +F C G Y + Q G+ +C D +G+ + T AQ L
Sbjct: 1090 WKQAGPQRNPGPGDLFIPVCLQTGEYVRKQTSGTGTWCVDPASGEGMPVNTNGSAQCPGL 1149
Query: 353 KCD*IKN 373
CD +K+
Sbjct: 1150 -CDVLKS 1155
>sp|P01267|THYG_BOVIN Thyroglobulin precursor
Length = 2769
Score = 55.8 bits (133), Expect = 3e-08
Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDKDDYHKL---H 211
P C G Y+ VQC CWCVD G E+ G + T +C K + L
Sbjct: 617 PACTAEGSYEEVQCFAGDCWCVDAQGRELAGSRVRGGRPRCPT-ECEKQRARMQSLLGSQ 675
Query: 212 IRGKMFF---CDVRGNYEKAQCLGSVCFCADENGKQIGST 322
G F C +GN+ QC S C+C D G+ I T
Sbjct: 676 PAGSSLFVPACTSKGNFLPVQCFNSECYCVDTEGQPIPGT 715
Score = 44.3 bits (103), Expect = 9e-05
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCV--GAACWCVDDSGDEIKG-YITGIEKSYGKTCKCAKDK---DDYH 202
P C + G ++ VQC GA+CWCVD G E+ G G + C+ K + Y
Sbjct: 50 PQCAEDGSFQTVQCGKDGASCWCVDADGREVPGSRQPGRPAACLSFCQLQKQQILLSSYI 109
Query: 203 KLHIRGKMFFCDVRGNYEKAQC--LGSVCFCADENGKQIGST 322
+ C G+Y QC C+C D G ++ T
Sbjct: 110 NSTATSYLPQCQDSGDYSPVQCDLRRRQCWCVDAEGMEVYGT 151
Score = 40.4 bits (93), Expect = 0.001
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCV-GAACWCVDDSGDEIKGYITGIEKSYGKTCKCAKDK 190
P C G Y+ QC G CWCVD G EI G + G+ CA+D+
Sbjct: 317 PSCHPDGEYQAAQCQQGGPCWCVDSRGQEIPG-----TRQRGEPPSCAEDQ 362
Score = 35.0 bits (79), Expect = 0.053
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 233 CDVRGNYEKAQCLGSVCFCADENGKQIGSTTV 328
C G+YE+ QC C+C D G+++ + V
Sbjct: 619 CTAEGSYEEVQCFAGDCWCVDAQGRELAGSRV 650
Score = 35.0 bits (79), Expect = 0.053
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYIT 142
P C+ G ++PVQC A CWCVD G+ + +T
Sbjct: 1029 PQCDAFGGWEPVQCHAATGHCWCVDGKGEYVPTSLT 1064
Score = 33.1 bits (74), Expect = 0.20
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +2
Query: 41 PFCE-DTGMYKPVQCVGA--ACWCVDDSGDEIKG 133
P C + G + PVQC A +CWCV SG+E+ G
Sbjct: 1167 PACRAEDGGFSPVQCDPAQGSCWCVLGSGEEVPG 1200
Score = 30.0 bits (66), Expect = 1.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 29 DVTFPFCEDTGMYKPVQCVGAACWCVDDSGDE 124
D+ P C +TG + +Q A WCVD + E
Sbjct: 1102 DLFIPTCLETGEFARLQASEAGTWCVDPASGE 1133
>sp|P81439|EQST_ACTEQ Equistatin
Length = 199
Score = 51.2 bits (121), Expect = 7e-07
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Frame = +2
Query: 17 SGAMDVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYITGIEKSYGKTCKCAKDK 190
SG + P C++TG ++ QC G+ CWCVD+ G EI G T I S C++ K
Sbjct: 14 SGLIGAYVPQCKETGEFEEKQCWGSTGYCWCVDEDGKEILG--TKIRGS----PDCSRRK 67
Query: 191 DDYHKLHIRGKMFF----------CDVRGNYEKAQCLGS--VCFCADENGKQIGST 322
+ + C G++++ QC S C+C D+ GK++ T
Sbjct: 68 AALTLCQMMQAIIVNVPGWCGPPSCKADGSFDEVQCCASNGECYCVDKKGKELEGT 123
Score = 37.0 bits (84), Expect = 0.014
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKG 133
P C + G Y PVQC + CWCVD+ G ++ G
Sbjct: 157 PQCLEDGSYNPVQCWPSTGYCWCVDEGGVKVPG 189
Score = 35.0 bits (79), Expect = 0.053
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 233 CDVRGNYEKAQCLGSV--CFCADENGKQIGSTTV 328
C G +E+ QC GS C+C DE+GK+I T +
Sbjct: 24 CKETGEFEEKQCWGSTGYCWCVDEDGKEILGTKI 57
>sp|P01266|THYG_HUMAN Thyroglobulin precursor
Length = 2768
Score = 50.8 bits (120), Expect = 9e-07
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKG-YITGIEKSYGKTCKCAKDK-DDYHKLHI 214
P C G Y+ VQC CWCV+ G E+ G + G + C+ + +
Sbjct: 618 PSCTTEGSYEDVQCFSGECWCVNSWGKELPGSRVRGGQPRCPTDCEKQRARMQSLMGSQP 677
Query: 215 RGKMFF---CDVRGNYEKAQCLGSVCFCADENGKQIGST 322
G F C G++ QC S C+C D G+ I T
Sbjct: 678 AGSTLFVPACTSEGHFLPVQCFNSECYCVDAEGQAIPGT 716
Score = 42.0 bits (97), Expect = 4e-04
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Frame = +2
Query: 2 RRLIKSGAMDVT----FPFCEDTGMYKPVQC--VGAACWCVDDSGDEIKGYITGIEKSYG 163
++++ SG ++ T P C+D+G Y PVQC CWCVD G E+ G + G
Sbjct: 101 QQILLSGYINSTDTSYLPQCQDSGDYAPVQCDVQQVQCWCVDAEGMEVYG-----TRQLG 155
Query: 164 KTCKCAKDKDDYHKLHIRG----KMFFCDVRGNYEKAQC 268
+ +C + + ++ + G C G + QC
Sbjct: 156 RPKRCPRSCEIRNRRLLHGVGDKSPPQCSAEGEFMPVQC 194
Score = 38.9 bits (89), Expect = 0.004
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCKC 178
P C G + PVQC + C+CVD G I G + I GK KC
Sbjct: 685 PACTSEGHFLPVQCFNSECYCVDAEGQAIPGTRSAI----GKPKKC 726
Score = 38.9 bits (89), Expect = 0.004
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Frame = +2
Query: 8 LIKSGAMDVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYITGIEKSYGK---TC 172
L++SG P C+ G ++PVQC CWCVD+ G I G +T + TC
Sbjct: 1021 LLRSGPY---MPQCDAFGSWEPVQCHAGTGHCWCVDEKGGFIPGSLTARSLQIPQCPTTC 1077
Query: 173 KCAKD-------KDDYHKLHIRGKMFF---CDVRGNYEKAQCLGSVCFCAD-ENGKQIGS 319
+ ++ K + + K F C G Y + Q G+ +C D +G+++
Sbjct: 1078 EKSRTSGLLSSWKQARSQENPSPKDLFVPACLETGEYARLQASGAGTWCVDPASGEELRP 1137
Query: 320 TTVHIAQLHTLKCD*IKN 373
+ AQ +L C+ +K+
Sbjct: 1138 GSSSSAQCPSL-CNVLKS 1154
Score = 38.5 bits (88), Expect = 0.005
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCV--GAACWCVDDSGDEIKG-YITGIEKSYGKTCKCAKDK---DDYH 202
P C + G ++ VQC G +CWCV +G E+ G G + C+ K + Y
Sbjct: 50 PQCAEDGSFQTVQCQNDGRSCWCVGANGSEVLGSRQPGRPVACLSFCQLQKQQILLSGYI 109
Query: 203 KLHIRGKMFFCDVRGNYEKAQC--LGSVCFCADENGKQIGST 322
+ C G+Y QC C+C D G ++ T
Sbjct: 110 NSTDTSYLPQCQDSGDYAPVQCDVQQVQCWCVDAEGMEVYGT 151
Score = 38.1 bits (87), Expect = 0.006
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Frame = +2
Query: 29 DVTFPFCEDTGMYKPVQCVGAACWCVDD-SGDEIKGYITGIEKSYGKTCKCAKDKDDYHK 205
D+ P C +TG Y +Q GA WCVD SG+E++ G S C K
Sbjct: 1102 DLFVPACLETGEYARLQASGAGTWCVDPASGEELR---PGSSSSAQCPSLCNVLKSGVLS 1158
Query: 206 LHIR-GKMFFCDVR-GNYEKAQC--LGSVCFCADENGKQIGSTTV 328
+ G + C G + QC C+C ++G+++ T V
Sbjct: 1159 RRVSPGYVPACRAEDGGFSPVQCDQAQGSCWCVMDSGEEVPGTRV 1203
Score = 35.0 bits (79), Expect = 0.053
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 41 PFCEDTGMYKPVQC-VGAACWCVDDSGDEIKGYITGIEKSYGKTCKCAK 184
P C G Y+ VQC CWCVD G E+ G + G+ CA+
Sbjct: 317 PSCRRNGDYQAVQCQTEGPCWCVDAQGKEMHG-----TRQQGEPPSCAE 360
Score = 32.3 bits (72), Expect = 0.34
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 233 CDVRGNYEKAQCLGSVCFCADENGKQIGSTTVHIAQ 340
C G+YE QC C+C + GK++ + V Q
Sbjct: 620 CTTEGSYEDVQCFSGECWCVNSWGKELPGSRVRGGQ 655
Score = 28.5 bits (62), Expect = 5.0
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +2
Query: 95 CWCVDDSGDEIKG 133
CWCVD++G E++G
Sbjct: 898 CWCVDEAGQELEG 910
>sp|P31226|SAX_RANCA Saxiphilin precursor (SAX)
Length = 844
Score = 48.5 bits (114), Expect = 5e-06
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYITGIEKSYGKTC------KCAKDKDD 196
P C++ G Y+P QC G+ CWCV+ G++I G T ++ TC KC K++
Sbjct: 128 PQCDEKGNYQPQQCHGSTGHCWCVNAMGEKISGTNTPPGQTRA-TCERHELPKCLKERQV 186
Query: 197 Y--HKLHIRGKMF-FCDVRGNYEKAQCLGSV--CFCADENGKQIGST 322
+ G+ CD +GNYE Q GS +C + G++I T
Sbjct: 187 ALGGDEKVLGRFVPQCDEKGNYEPQQFHGSTGYSWCVNAIGEEIAGT 233
>sp|O88322|NID2_MOUSE Nidogen-2 precursor (NID-2) (Entactin-2)
Length = 1403
Score = 46.2 bits (108), Expect = 2e-05
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 20/117 (17%)
Frame = +2
Query: 32 VTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYIT-----------GIEKSYGKTC 172
+ P C+D G + P+QC G+ CWCVD +G E+ G T E +
Sbjct: 986 IHIPQCDDQGNFVPLQCHGSTGFCWCVDRNGHEVPGTQTPPGSTPPHCGPPPEPTQRPRT 1045
Query: 173 KCAKDKD---DYHKLHIRGKMFF--CDVRGNYEKAQCLG--SVCFCADENGKQIGST 322
C + ++ +++ R + CD G++ QC G C+C D++G+++ T
Sbjct: 1046 VCERWRESLLEHYGGTPRDDQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGRELQGT 1102
Score = 40.4 bits (93), Expect = 0.001
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 29 DVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKG 133
D P C+D G + P+QC G + CWCVD G E++G
Sbjct: 1065 DQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGRELQG 1101
>sp|Q14112|NID2_HUMAN Nidogen-2 precursor (NID-2) (Osteonidogen)
Length = 1375
Score = 45.1 bits (105), Expect = 5e-05
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 21/115 (18%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYIT-----------GIEKSYGKTCKCA 181
P C++ G + P+QC G+ CWCVD G E+ G T E + C
Sbjct: 961 PQCDEQGNFLPLQCHGSTGFCWCVDPDGHEVPGTQTPPGSTPPHCGPSPEPTQRPPTICE 1020
Query: 182 KDKDDYHKLHIRGK------MFFCDVRGNYEKAQCLG--SVCFCADENGKQIGST 322
+ +++ + H G + CD G++ QC G C+C D++G+++ T
Sbjct: 1021 RWRENLLE-HYGGTPRDDQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGREVQGT 1074
Score = 40.8 bits (94), Expect = 0.001
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 29 DVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKG 133
D P C+D G + P+QC G + CWCVD G E++G
Sbjct: 1037 DQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGREVQG 1073
>sp|Q9BQ16|TICN3_HUMAN Testican-3 precursor (SPARC/osteonectin, CWCV, and Kazal-like
domains proteoglycan 3)
Length = 436
Score = 44.3 bits (103), Expect = 9e-05
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKG 133
P C++ G YKP QC G+ CWCVD G+E+ G
Sbjct: 339 PLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMG 371
Score = 31.2 bits (69), Expect = 0.76
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 233 CDVRGNYEKAQCLGSV--CFCADENGKQIGSTTVH 331
CD G Y+ QC GSV C+C D G ++ + ++
Sbjct: 341 CDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRIN 375
>sp|Q5RD69|TICN3_PONPY Testican-3 precursor (SPARC/osteonectin, CWCV, and Kazal-like
domains proteoglycan 3)
Length = 436
Score = 44.3 bits (103), Expect = 9e-05
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +2
Query: 41 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKG 133
P C++ G YKP QC G+ CWCVD G+E+ G
Sbjct: 339 PLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMG 371
Score = 31.2 bits (69), Expect = 0.76
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 233 CDVRGNYEKAQCLGSV--CFCADENGKQIGSTTVH 331
CD G Y+ QC GSV C+C D G ++ + ++
Sbjct: 341 CDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRIN 375
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,303,168
Number of Sequences: 369166
Number of extensions: 968406
Number of successful extensions: 2822
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2761
length of database: 68,354,980
effective HSP length: 94
effective length of database: 50,989,890
effective search space used: 1682666370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)