Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_G12
(174 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P53420|CO4A4_HUMAN Collagen alpha 4(IV) chain precursor 42 6e-04
sp|P02458|CO2A1_HUMAN Collagen alpha 1(II) chain precursor ... 41 0.001
sp|Q14031|CO4A6_HUMAN Collagen alpha 6(IV) chain precursor 41 0.001
sp|P11087|CO1A1_MOUSE Collagen alpha 1(I) chain precursor 40 0.002
sp|Q9XSJ7|CO1A1_CANFA Collagen alpha 1(I) chain precursor 40 0.002
sp||P02459_1 [Segment 1 of 2] Collagen alpha 1(II) chain pr... 40 0.002
sp||P02454_1 [Segment 1 of 2] Collagen alpha 1(I) chain 40 0.002
sp|P02452|CO1A1_HUMAN Collagen alpha 1(I) chain precursor 40 0.002
sp|P02456|CA11_RABIT Collagen alpha 1(I) chain 40 0.002
sp||P02453_1 [Segment 1 of 2] Collagen alpha 1(I) chain 40 0.002
>sp|P53420|CO4A4_HUMAN Collagen alpha 4(IV) chain precursor
Length = 1690
Score = 41.6 bits (96), Expect = 6e-04
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ G GI GPRGDPG PGA GP G+ G
Sbjct: 775 LSGVPGIKGPRGDPGCPGAEGPAGIPG 801
Score = 34.3 bits (77), Expect = 0.091
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G G +GDPG PGA GP GL GK
Sbjct: 518 GLPGWLGTKGDPGPPGAEGPPGLPGK 543
Score = 34.3 bits (77), Expect = 0.091
Identities = 17/29 (58%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +2
Query: 92 QGPVGISGPRGD---PGIPGAIGPTGLSG 169
QGP G GP G+ PG PG GPTGL G
Sbjct: 1333 QGPHGFPGPPGEKGLPGPPGRKGPTGLPG 1361
Score = 33.1 bits (74), Expect = 0.20
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G+ G G PG PGA GP GL G
Sbjct: 864 GPAGMKGLPGLPGRPGAHGPPGLPG 888
Score = 32.7 bits (73), Expect = 0.26
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
QG GI GPRG PG PG G +G G
Sbjct: 1105 QGLPGIQGPRGSPGRPGPPGSSGPPG 1130
Score = 32.0 bits (71), Expect = 0.45
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 98 PVGISGPRGDPGIPGAIGPTG 160
P+ + GP GDPG PG G TG
Sbjct: 362 PLPLKGPPGDPGFPGRYGETG 382
Score = 32.0 bits (71), Expect = 0.45
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G G PG G GLSG
Sbjct: 677 GPPGFDGPPGPKGFPGPQGAPGLSG 701
Score = 32.0 bits (71), Expect = 0.45
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GP+G GP+G G PG G GL G
Sbjct: 1324 KGPMGFPGPQGPHGFPGPPGEKGLPG 1349
Score = 31.6 bits (70), Expect = 0.59
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+GP G GP+G G GA GP GLSG+
Sbjct: 64 RGPPGPPGPQGPIGPLGAPGPIGLSGE 90
Score = 31.6 bits (70), Expect = 0.59
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 104 GISGPRGDPGIPGAIGPTGLSG 169
GI G RGDPG+PG G G G
Sbjct: 184 GIQGDRGDPGLPGLPGSWGAGG 205
Score = 31.6 bits (70), Expect = 0.59
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G +G GP+G PG+PG G G+ G+
Sbjct: 402 GMIGPPGPQGFPGLPGLPGEAGIPGR 427
Score = 31.2 bits (69), Expect = 0.77
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G +GP G PG PG +GP G G+
Sbjct: 202 GAGGPAGPTGYPGEPGLVGPPGQPGR 227
Score = 31.2 bits (69), Expect = 0.77
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP G GPRG PG PG G G G
Sbjct: 898 LPGPPGPKGPRGLPGFPGFPGERGKPG 924
Score = 31.2 bits (69), Expect = 0.77
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
I GP GI GP G PG+ G G G G
Sbjct: 1161 IPGPPGIKGPSGSPGLNGLHGLKGQKG 1187
Score = 31.2 bits (69), Expect = 0.77
Identities = 18/29 (62%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +2
Query: 95 GPVGIS---GPRGDPGIPGAIGPTGLSGK 172
GPVGI G RGDPG PG I P G GK
Sbjct: 1201 GPVGIPGLKGERGDPGSPG-ISPPGPRGK 1228
Score = 31.2 bits (69), Expect = 0.77
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 10/36 (27%)
Frame = +2
Query: 92 QGPVGISGPRGDPG----------IPGAIGPTGLSG 169
+GP G+ GPRG+PG IPG G G+ G
Sbjct: 1354 KGPTGLPGPRGEPGPPADVDDCPRIPGLPGAPGMRG 1389
Score = 30.8 bits (68), Expect = 1.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ G G GP G PGIPG G GL G
Sbjct: 874 LPGRPGAHGPPGLPGIPGPFGDDGLPG 900
Score = 30.8 bits (68), Expect = 1.0
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G GI GP GD G+PG GP G G
Sbjct: 885 GLPGIPGPFGDDGLPGPPGPKGPRG 909
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G GP G PG G GP G +G+
Sbjct: 1224 GPRGKKGPPGPPGSSGPPGPAGATGR 1249
Score = 30.8 bits (68), Expect = 1.0
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGL 163
QGP G GPRG PG PG G L
Sbjct: 1263 QGPPGPDGPRGAPGPPGLPGSVDL 1286
Score = 30.4 bits (67), Expect = 1.3
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G G GPRGDPG G+ G GL G+
Sbjct: 301 KGIPGFPGPRGDPGSYGSPGFPGLKGE 327
Score = 30.4 bits (67), Expect = 1.3
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G G G PG PG GP GL G+
Sbjct: 636 GPPGERGHPGVPGHPGVRGPDGLKGQ 661
Score = 30.4 bits (67), Expect = 1.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
++G +G G GD G PG+ GP G SG
Sbjct: 1037 LRGFIGFPGLPGDQGEPGSPGPPGFSG 1063
Score = 30.0 bits (66), Expect = 1.7
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 9/34 (26%)
Frame = +2
Query: 95 GPVGISGP---RGDPGIPGAIG------PTGLSG 169
GP+G+SG RGD G PGA G PTG+ G
Sbjct: 83 GPIGLSGEKGMRGDRGPPGAAGDKGDKGPTGVPG 116
Score = 30.0 bits (66), Expect = 1.7
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+GP G+ G G GIPG GP G GK
Sbjct: 109 KGPTGVPGFPGLDGIPGHPGPPGPRGK 135
Score = 30.0 bits (66), Expect = 1.7
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G PG GA GP G G
Sbjct: 530 GPPGAEGPPGLPGKHGASGPPGNKG 554
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G+ G G PG PG GP+G G
Sbjct: 1151 GPRGLQGDPGIPGPPGIKGPSGSPG 1175
Score = 29.6 bits (65), Expect = 2.2
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +2
Query: 95 GPVGISGPRG---DPGIPGAIGPTGLSG 169
G +G GPRG DPGIPG G G SG
Sbjct: 1145 GEMGDPGPRGLQGDPGIPGPPGIKGPSG 1172
Score = 29.6 bits (65), Expect = 2.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G+ G RG G+PG+ GP G G
Sbjct: 1408 KGEPGLDGRRGVDGVPGSPGPPGRKG 1433
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G +G RGDPG PG G G G
Sbjct: 137 GMSGHNGSRGDPGFPGGRGALGPGG 161
Score = 29.3 bits (64), Expect = 2.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP+G PG+ G+ G G G
Sbjct: 686 GPKGFPGPQGAPGLSGSDGHKGRPG 710
Score = 29.3 bits (64), Expect = 2.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 104 GISGPRGDPGIPGAIGPTGLSGK 172
G GP+G+PG PG G G SG+
Sbjct: 1082 GPPGPKGEPGSPGCPGHFGASGE 1104
Score = 29.3 bits (64), Expect = 2.9
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G G GA GP GL G
Sbjct: 1258 GPPGDQGPPGPDGPRGAPGPPGLPG 1282
Score = 28.9 bits (63), Expect = 3.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGL 163
G G+ GP+GDPG G GP G+
Sbjct: 335 GLFGLIGPKGDPGNRGHPGPPGV 357
Score = 28.9 bits (63), Expect = 3.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP G S RG PGIPG G G G
Sbjct: 820 VPGPPGHSCERGAPGIPGQPGLPGYPG 846
Score = 28.9 bits (63), Expect = 3.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 98 PVGISGPRGDPGIPGAIGPTGLSG 169
P G G +G PG PG+ GP G +G
Sbjct: 1222 PPGPRGKKGPPGPPGSSGPPGPAG 1245
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGL 163
G G GP G PG G +GP GL
Sbjct: 610 GGKGFPGPLGPPGKAGPVGPPGL 632
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G PG PG G GL G
Sbjct: 308 GPRGDPGSYGSPGFPGLKGELGLVG 332
Score = 28.1 bits (61), Expect = 6.5
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
QG G GP G GI GA GP G G
Sbjct: 1050 QGEPGSPGPPGFSGIDGARGPKGNKG 1075
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G PG PG G +G G
Sbjct: 1082 GPPGPKGEPGSPGCPGHFGASGEQG 1106
Score = 27.7 bits (60), Expect = 8.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G G PG IG +G G
Sbjct: 68 GPPGPQGPIGPLGAPGPIGLSGEKG 92
Score = 27.7 bits (60), Expect = 8.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTG 160
+ G G+ GP G G+PG GP G
Sbjct: 1381 LPGAPGMRGPEGAMGLPGMRGPPG 1404
>sp|P02458|CO2A1_HUMAN Collagen alpha 1(II) chain precursor [Contains: Chondrocalcin]
Length = 1418
Score = 40.8 bits (94), Expect = 0.001
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GP G GPRG+PG PG+ GP G SG
Sbjct: 314 RGPEGAQGPRGEPGTPGSPGPAGASG 339
Score = 37.4 bits (85), Expect = 0.011
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+QGP+G GPRG PG GA GP G G
Sbjct: 130 MQGPMGPMGPRGPPGPAGAPGPQGFQG 156
Score = 35.4 bits (80), Expect = 0.041
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G+ GPRG PG PG GP G SG
Sbjct: 642 GAQGLQGPRGLPGTPGTDGPKGASG 666
Score = 34.3 bits (77), Expect = 0.091
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GPVG SG G GIPG IGP G G+
Sbjct: 1098 GPVGPSGKDGANGIPGPIGPPGPRGR 1123
Score = 33.1 bits (74), Expect = 0.20
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G GP+G G PG GPTG++G
Sbjct: 788 KGDAGAPGPQGPSGAPGPQGPTGVTG 813
Score = 32.7 bits (73), Expect = 0.26
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +2
Query: 95 GPVGISGPRGDP---GIPGAIGPTGLSG 169
GP G++GP G+P G PGA GP G G
Sbjct: 954 GPPGLTGPAGEPGREGSPGADGPPGRDG 981
Score = 32.3 bits (72), Expect = 0.35
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSGK 172
+ GP+G GP G PG PG G G GK
Sbjct: 166 VSGPMGPRGPPGPPGKPGDDGEAGKPGK 193
Score = 32.3 bits (72), Expect = 0.35
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G GI+GP+GD G G GP G GK
Sbjct: 686 RGAAGIAGPKGDRGDVGEKGPEGAPGK 712
Score = 32.3 bits (72), Expect = 0.35
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
QGP G++GP+G G G G TG G
Sbjct: 806 QGPTGVTGPKGARGAQGPPGATGFPG 831
Score = 32.3 bits (72), Expect = 0.35
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
QGP+G SGP G GI G GP G G+
Sbjct: 1025 QGPMGPSGPAGARGIQGPQGPRGDKGE 1051
Score = 32.0 bits (71), Expect = 0.45
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G RG PG G GP G SG
Sbjct: 741 GPAGSAGARGAPGERGETGPPGTSG 765
Score = 32.0 bits (71), Expect = 0.45
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G VG G G PG PG GPTG G
Sbjct: 993 GAVGAPGAPGPPGSPGPAGPTGKQG 1017
Score = 31.6 bits (70), Expect = 0.59
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G PG PGA G G +G
Sbjct: 285 GPPGPVGPAGGPGFPGAPGAKGEAG 309
Score = 31.6 bits (70), Expect = 0.59
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 9/35 (25%)
Frame = +2
Query: 92 QGPVGISGPR---------GDPGIPGAIGPTGLSG 169
+GP G++GP+ G+PG+PGA G TG G
Sbjct: 464 RGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPG 498
Score = 31.6 bits (70), Expect = 0.59
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G G RG PG+ G GP G +G+
Sbjct: 519 GPPGPQGARGQPGVMGFPGPKGANGE 544
Score = 31.6 bits (70), Expect = 0.59
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GP G +GP G+ G GA GP+G G
Sbjct: 572 EGPPGPAGPAGERGEQGAPGPSGFQG 597
Score = 31.2 bits (69), Expect = 0.77
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G VG+ G RG+ G PG GP+G G+
Sbjct: 911 RGIVGLPGQRGERGFPGLPGPSGEPGQ 937
Score = 31.2 bits (69), Expect = 0.77
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
QG G +GP G G PG +GP+G G
Sbjct: 1082 QGASGPAGPSGPRGPPGPVGPSGKDG 1107
Score = 30.8 bits (68), Expect = 1.0
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +2
Query: 92 QGPVGISGP---RGDPGIPGAIGPTGLSGK 172
QGP G GP RGD G GA GP G G+
Sbjct: 56 QGPAGEQGPRGDRGDKGEKGAPGPRGRDGE 85
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G+PG PG GP G G
Sbjct: 150 GPQGFQGNPGEPGEPGVSGPMGPRG 174
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G RG+ G PG GP G G
Sbjct: 267 GPAGAAGARGNDGQPGPAGPPGPVG 291
Score = 30.8 bits (68), Expect = 1.0
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGA---IGPTGLSG 169
GPVG +G G PG PGA GPTG G
Sbjct: 288 GPVGPAGGPGFPGAPGAKGEAGPTGARG 315
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G G RG G PG +GP G G+
Sbjct: 414 GPAGEEGKRGARGEPGGVGPIGPPGE 439
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G G GD G PG +GP GL+G
Sbjct: 936 GQQGAPGASGDRGPPGPVGPPGLTG 960
Score = 30.8 bits (68), Expect = 1.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
I GP+G GPRG G G GP G G
Sbjct: 1111 IPGPIGPPGPRGRSGETGPAGPPGNPG 1137
Score = 30.4 bits (67), Expect = 1.3
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G SG G GIPGA G G G
Sbjct: 333 GPAGASGNPGTDGIPGAKGSAGAPG 357
Score = 30.4 bits (67), Expect = 1.3
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSGK 172
I G G GPRG P GA GP G G+
Sbjct: 358 IAGAPGFPGPRGPPDPQGATGPLGPKGQ 385
Score = 30.4 bits (67), Expect = 1.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSGK 172
+ GP G +G G PG PG G GL+G+
Sbjct: 469 LAGPKGANGDPGRPGEPGLPGARGLTGR 496
Score = 30.4 bits (67), Expect = 1.3
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G +GD G GA GP G SG
Sbjct: 1008 GPAGPTGKQGDRGEAGAQGPMGPSG 1032
Score = 30.4 bits (67), Expect = 1.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G RG+ G G +GP+G +G
Sbjct: 1011 GPTGKQGDRGEAGAQGPMGPSGPAG 1035
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP+G G PG G G+SG
Sbjct: 144 GPAGAPGPQGFQGNPGEPGEPGVSG 168
Score = 30.0 bits (66), Expect = 1.7
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
QG VG SG G+ G PG GP G G+
Sbjct: 503 QGKVGPSGAPGEDGRPGPPGPQGARGQ 529
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G GD G+PG G GL G
Sbjct: 603 GPPGEGGKPGDQGVPGEAGAPGLVG 627
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G SGP G PG G G G+ G+
Sbjct: 660 GPKGASGPAGPPGAQGPPGLQGMPGE 685
Score = 29.6 bits (65), Expect = 2.2
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GPRG PG PG G G +GK
Sbjct: 165 GVSGPMGPRGPPGPPGKPGDDGEAGK 190
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G RG+ G PG G GL G
Sbjct: 576 GPAGPAGERGEQGAPGPSGFQGLPG 600
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G G GP G G+PG GP G GK
Sbjct: 584 RGEQGAPGPSGFQGLPGPPGPPGEGGK 610
Score = 29.6 bits (65), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP+G GP G G G +GP G +G
Sbjct: 718 LTGPIGPPGPAGANGEKGEVGPPGPAG 744
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G VG G G+PG PG GP+G G
Sbjct: 834 GRVGPPGSNGNPGPPGPPGPSGKDG 858
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G G G G PG PG+ GP G +GK
Sbjct: 989 RGETGAVGAPGAPGPPGSPGPAGPTGK 1015
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G G RG PG G GP GL G
Sbjct: 629 RGERGFPGERGSPGAQGLQGPRGLPG 654
Score = 29.3 bits (64), Expect = 2.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G G+PG G G++G
Sbjct: 669 GPPGAQGPPGLQGMPGERGAAGIAG 693
Score = 29.3 bits (64), Expect = 2.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G +G +GD G PG GP+G G
Sbjct: 779 KGEQGEAGQKGDAGAPGPQGPSGAPG 804
Score = 29.3 bits (64), Expect = 2.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTG 160
G G +GP G+PG PG GP G
Sbjct: 1125 GETGPAGPPGNPGPPGPPGPPG 1146
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G SG G+ G PG +GP GL G+
Sbjct: 237 GVKGESGSPGENGSPGPMGPRGLPGE 262
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
QGP G GP G G PG G G G
Sbjct: 398 QGPKGEPGPAGPQGAPGPAGEEGKRG 423
Score = 28.9 bits (63), Expect = 3.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G+ GPRG+ G PG G G G
Sbjct: 621 GAPGLVGPRGERGFPGERGSPGAQG 645
Score = 28.9 bits (63), Expect = 3.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
QGP G GP+G G+ G G G G
Sbjct: 797 QGPSGAPGPQGPTGVTGPKGARGAQG 822
Score = 28.9 bits (63), Expect = 3.8
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GP G G PG GP G SGK
Sbjct: 831 GAAGRVGPPGSNGNPGPPGPPGPSGK 856
Score = 28.9 bits (63), Expect = 3.8
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +2
Query: 95 GPVGISGP---RGDPGIPGAIGPTGLSG 169
GP G GP RGD G PG G GL G
Sbjct: 852 GPSGKDGPKGARGDSGPPGRAGEPGLQG 879
Score = 28.9 bits (63), Expect = 3.8
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 6/34 (17%)
Frame = +2
Query: 89 IQGPVGISGPRGDP------GIPGAIGPTGLSGK 172
+QGP G G +G+P G G GP GL+G+
Sbjct: 877 LQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQ 910
Score = 28.9 bits (63), Expect = 3.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G++G RG G+PG G G G
Sbjct: 903 GPQGLAGQRGIVGLPGQRGERGFPG 927
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+QG G GP GD G G GP+G G
Sbjct: 1069 LQGLPGPPGPSGDQGASGPAGPSGPRG 1095
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G +GP G PG PG GP G G
Sbjct: 1121 RGRSGETGPAGPPGNPGPPGPPGPPG 1146
Score = 28.5 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G GPRG PG G GP G +G
Sbjct: 249 GSPGPMGPRGLPGERGRTGPAGAAG 273
Score = 28.5 bits (62), Expect = 5.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+QGP G+ G G G GA GP G G
Sbjct: 646 LQGPRGLPGTPGTDGPKGASGPAGPPG 672
Score = 28.5 bits (62), Expect = 5.0
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = +2
Query: 92 QGPVGISGPRGDPGI---PGAIGPTGLSGK 172
QG G SG RG PG PG GP G G+
Sbjct: 938 QGAPGASGDRGPPGPVGPPGLTGPAGEPGR 967
Score = 28.1 bits (61), Expect = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G +G+ G PG G G G
Sbjct: 726 GPAGANGEKGEVGPPGPAGSAGARG 750
Score = 28.1 bits (61), Expect = 6.5
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
IQGP GPRGD G G G GL G
Sbjct: 1039 IQGP---QGPRGDKGEAGEPGERGLKG 1062
Score = 27.7 bits (60), Expect = 8.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G G G PG PG GP GL G
Sbjct: 84 GEPGTLGNPGPPGPPGPPGPPGLGG 108
Score = 27.7 bits (60), Expect = 8.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GP G G RG PG PG G G G
Sbjct: 197 RGPPGPQGARGFPGTPGLPGVKGHRG 222
Score = 27.7 bits (60), Expect = 8.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G PG G GP G G
Sbjct: 501 GPQGKVGPSGAPGEDGRPGPPGPQG 525
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G +G GP+G G PG G GL G
Sbjct: 531 GVMGFPGPKGANGEPGKAGEKGLPG 555
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GP G G G G+ G IGP G +G
Sbjct: 704 KGPEGAPGKDGGRGLTGPIGPPGPAG 729
Score = 27.7 bits (60), Expect = 8.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G GI+GP G G PGA G G +G+
Sbjct: 762 GTSGIAGPPGADGQPGAKGEQGEAGQ 787
>sp|Q14031|CO4A6_HUMAN Collagen alpha 6(IV) chain precursor
Length = 1691
Score = 40.8 bits (94), Expect = 0.001
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
QGPVG+ G +G PGIPG GP+GL G
Sbjct: 1400 QGPVGLQGSKGLPGIPGKDGPSGLPG 1425
Score = 37.0 bits (84), Expect = 0.014
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ G GI+GP+G PG PGA+GP G G
Sbjct: 176 LPGLDGITGPQGAPGFPGAVGPAGPPG 202
Score = 33.5 bits (75), Expect = 0.16
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +2
Query: 95 GPVGISGPRG---DPGIPGAIGPTGLSG 169
GP G+ GP G DPG+PG GP G G
Sbjct: 1419 GPSGLPGPPGALGDPGLPGLQGPPGFEG 1446
Score = 33.1 bits (74), Expect = 0.20
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP+GI GP G G G+ G +GL G+
Sbjct: 53 GPIGIQGPTGPQGFTGSTGLSGLKGE 78
Score = 32.7 bits (73), Expect = 0.26
Identities = 20/57 (35%), Positives = 23/57 (40%)
Frame = +2
Query: 2 PGSTGIEXXXXXXXXXXXXXXXXXXXXXXIQGPVGISGPRGDPGIPGAIGPTGLSGK 172
PGS G+ I G GISG RG GIPG+ G G SG+
Sbjct: 881 PGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLPGISGTRGLKGIPGSTGKMGPSGR 937
Score = 32.3 bits (72), Expect = 0.35
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G G GP G PG+ G +GP+G GK
Sbjct: 518 RGSGGAQGPAGAPGLVGPLGPSGPKGK 544
Score = 31.6 bits (70), Expect = 0.59
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G G G G PG PG+ GP G+ GK
Sbjct: 800 RGSPGTPGQVGQPGTPGSSGPYGIKGK 826
Score = 31.6 bits (70), Expect = 0.59
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G+ G +GD G PG GP GL G
Sbjct: 1220 GKPGLRGQKGDRGFPGLQGPAGLPG 1244
Score = 31.2 bits (69), Expect = 0.77
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ G +GI+G G PG PG GP GL G
Sbjct: 99 VPGFLGINGIPGHPGQPGPRGPPGLDG 125
Score = 31.2 bits (69), Expect = 0.77
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
++GP G+ G G+PGA+GP G G
Sbjct: 381 LRGPSGVPGLPALSGVPGALGPQGFPG 407
Score = 31.2 bits (69), Expect = 0.77
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G G RG PG+PGA G GL G
Sbjct: 1045 GESGSQGIRGSPGLPGASGLPGLKG 1069
Score = 31.2 bits (69), Expect = 0.77
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +2
Query: 95 GPVGISGPRGDPGI---PGAIGPTGLSG 169
GP+G+ G G PG+ PGA GP GL G
Sbjct: 1380 GPLGLPGIDGIPGLTGDPGAQGPVGLQG 1407
Score = 30.8 bits (68), Expect = 1.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G+SG +G+ G PG +GP G G
Sbjct: 68 GSTGLSGLKGERGFPGLLGPYGPKG 92
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G +G PG PG +GP G G
Sbjct: 196 GPAGPPGLQGPPGPPGPLGPDGNMG 220
Score = 30.8 bits (68), Expect = 1.0
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIP----GAIGPTGLSGK 172
+ GP G+ GP+G+ G P GA G GL G+
Sbjct: 1196 VPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQ 1227
Score = 30.4 bits (67), Expect = 1.3
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G GPRGD G G GP GL G
Sbjct: 978 GSNGFPGPRGDKGEAGRPGPPGLPG 1002
Score = 30.4 bits (67), Expect = 1.3
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 6/28 (21%)
Frame = +2
Query: 104 GISGPRGDPGIP------GAIGPTGLSG 169
G++G RG+PG+P GAIGP G G
Sbjct: 1133 GVAGMRGEPGLPGSSGHQGAIGPLGSPG 1160
Score = 30.4 bits (67), Expect = 1.3
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G+ GP+G PG PG G GL G
Sbjct: 1157 GSPGLIGPKGFPGFPGLHGLNGLPG 1181
Score = 30.4 bits (67), Expect = 1.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GDPG PG GP G G
Sbjct: 1283 GPSSNQGDTGDPGFPGIPGPKGPKG 1307
Score = 29.6 bits (65), Expect = 2.2
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP GI G G PG PG G +G GK
Sbjct: 819 GPYGIKGKSGLPGAPGFPGISGHPGK 844
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGI---PGAIGPTGLSG 169
+ G +G+ G RG+PG PG +GP G G
Sbjct: 1317 LPGELGLKGMRGEPGFMGTPGKVGPPGDPG 1346
Score = 29.3 bits (64), Expect = 2.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
QG VG GP G PG+ +GP GL G+
Sbjct: 130 QGAVGFPGPDGYPGL---LGPPGLPGQ 153
Score = 29.3 bits (64), Expect = 2.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ P G +GDPG+PG G TG G
Sbjct: 161 VLAPGSFKGMKGDPGLPGLDGITGPQG 187
Score = 29.3 bits (64), Expect = 2.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G +G G RG PG PG +G G G
Sbjct: 792 GLLGPKGERGSPGTPGQVGQPGTPG 816
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G RG PG+ G+ G TG G
Sbjct: 1018 GPPGFMGIRGLPGLKGSSGITGFPG 1042
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G VG+SG G PG PG G G+ G+
Sbjct: 1115 GKVGVSGDVGLPGAPGFPGVAGMRGE 1140
Score = 28.9 bits (63), Expect = 3.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G +G G+PG +G G+ G
Sbjct: 86 GPYGPKGDKGPMGVPGFLGINGIPG 110
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G G+ GPRG G G GP G GK
Sbjct: 293 KGIPGLPGPRGPMGSEGVQGPPGQQGK 319
Score = 28.9 bits (63), Expect = 3.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G GP+G G+PG G G SG
Sbjct: 670 GTPGFPGPKGSRGLPGTPGQPGSSG 694
Score = 28.9 bits (63), Expect = 3.8
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +2
Query: 95 GPVGISGPRGDPGIP---GAIGPTGLSG 169
G G GP GDPG P G GP G SG
Sbjct: 1334 GTPGKVGPPGDPGFPGMKGKAGPRGSSG 1361
Score = 28.9 bits (63), Expect = 3.8
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 6/33 (18%)
Frame = +2
Query: 89 IQGPVGI------SGPRGDPGIPGAIGPTGLSG 169
+QG G+ GP G PG PGA+G GL G
Sbjct: 1405 LQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPG 1437
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G G +G PG+PG GP G G
Sbjct: 285 GEKGEKGEKGIPGLPGPRGPMGSEG 309
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSGK 172
+QGP G G +G G PG G G+ G+
Sbjct: 310 VQGPPGQQGKKGTLGFPGLNGFQGIEGQ 337
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G+ G +GD GI G GP+G+ G
Sbjct: 365 GVPGLPGLKGDEGIQGLRGPSGVPG 389
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G G +G G PG +GP G SG
Sbjct: 515 RGDRGSGGAQGPAGAPGLVGPLGPSG 540
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G G +G+ GIPG GP G G
Sbjct: 282 GTTGEKGEKGEKGIPGLPGPRGPMG 306
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G+ G RGD G GA GP G G
Sbjct: 507 GLPGLKGARGDRGSGGAQGPAGAPG 531
Score = 28.1 bits (61), Expect = 6.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ G G+ GP+G+ G PG G G G
Sbjct: 787 VHGKPGLLGPKGERGSPGTPGQVGQPG 813
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ G VG+ G G PG+ G G GL G
Sbjct: 1119 VSGDVGLPGAPGFPGVAGMRGEPGLPG 1145
Score = 27.7 bits (60), Expect = 8.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
I G G GPRG PG+ G G G G
Sbjct: 108 IPGHPGQPGPRGPPGLDGCNGTQGAVG 134
Score = 27.7 bits (60), Expect = 8.5
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
I G G SG G PG PG G GL G
Sbjct: 659 IPGSYGPSGFPGTPGFPGPKGSRGLPG 685
Score = 27.7 bits (60), Expect = 8.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
I GP G G +G PG G G GL G
Sbjct: 1299 IPGPKGPKGDQGIPGFSGLPGELGLKG 1325
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G+ GP G G PG GP G+ G
Sbjct: 1434 GLPGLQGPPGFEGAPGQQGPFGMPG 1458
>sp|P11087|CO1A1_MOUSE Collagen alpha 1(I) chain precursor
Length = 1453
Score = 39.7 bits (91), Expect = 0.002
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP+G SGPRG PG PGA GP G G
Sbjct: 166 VPGPMGPSGPRGLPGPPGAPGPQGFQG 192
Score = 35.0 bits (79), Expect = 0.053
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G PG PGA+G G +G
Sbjct: 321 GPPGPTGPTGPPGFPGAVGAKGEAG 345
Score = 35.0 bits (79), Expect = 0.053
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G G +GP G PG PGA GP G +GK
Sbjct: 1025 RGETGPAGPPGAPGAPGAPGPVGPAGK 1051
Score = 34.3 bits (77), Expect = 0.091
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G+PG PG GP G G
Sbjct: 186 GPQGFQGPPGEPGEPGGSGPMGPRG 210
Score = 33.5 bits (75), Expect = 0.16
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G+ GP G PG PG GP+G SG
Sbjct: 1100 RGFSGLQGPPGSPGSPGEQGPSGASG 1125
Score = 33.1 bits (74), Expect = 0.20
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G VG+ G RG+ G PG GP+G GK
Sbjct: 947 RGVVGLPGQRGERGFPGLPGPSGEPGK 973
Score = 32.7 bits (73), Expect = 0.26
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G +G RG PG PGA+GP G G+
Sbjct: 579 GEPGKAGERGLPGPPGAVGPAGKDGE 604
Score = 32.7 bits (73), Expect = 0.26
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2
Query: 92 QGPVGISGPRGDP---GIPGAIGPTGLSGK 172
QGP G SG RG P G PG GP G SG+
Sbjct: 974 QGPSGSSGERGPPGPMGPPGLAGPPGESGR 1003
Score = 32.7 bits (73), Expect = 0.26
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G PG PG +GP G +G
Sbjct: 1029 GPAGPPGAPGAPGAPGPVGPAGKNG 1053
Score = 32.3 bits (72), Expect = 0.35
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+QGP G +GPRG+ G PG G G +G
Sbjct: 676 VQGPPGPAGPRGNNGAPGNDGAKGDTG 702
Score = 32.3 bits (72), Expect = 0.35
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G+ G PGA GP G G
Sbjct: 912 GPPGPPGPAGEKGSPGADGPAGSPG 936
Score = 31.6 bits (70), Expect = 0.59
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP+G GP G PG G GP+G G
Sbjct: 754 LTGPIGPPGPAGAPGDKGEAGPSGPPG 780
Score = 31.6 bits (70), Expect = 0.59
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
QGP G SGP G G PG+ G G G
Sbjct: 1118 QGPSGASGPAGPRGPPGSAGSPGKDG 1143
Score = 31.2 bits (69), Expect = 0.77
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 6/33 (18%)
Frame = +2
Query: 92 QGPVGISGPRGDPG------IPGAIGPTGLSGK 172
+G G +GP+G+PG PG +GP GL G+
Sbjct: 266 KGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGE 298
Score = 31.2 bits (69), Expect = 0.77
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2
Query: 92 QGPVGISGPRG---DPGIPGAIGPTGLSGK 172
QGP G GP+G +PG PG G TG G+
Sbjct: 410 QGPSGPPGPKGNSGEPGAPGNKGDTGAKGE 439
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GP G+ G G PG GA GP G G
Sbjct: 353 EGPQGVRGEPGPPGPAGAAGPAGNPG 378
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G+ G PG GP G +G
Sbjct: 834 GPAGPPGPIGNVGAPGPKGPRGAAG 858
Score = 30.8 bits (68), Expect = 1.0
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGA---IGPTGLSG 169
+GP G +GP G G PGA +GP G SG
Sbjct: 851 KGPRGAAGPPGATGFPGAAGRVGPPGPSG 879
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GP G GPRGD G G G G+ G
Sbjct: 1073 RGPAGPQGPRGDKGETGEQGDRGIKG 1098
Score = 30.4 bits (67), Expect = 1.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 101 VGISGPRGDPGIPGAIGPTGLSGK 172
VG+ GP+G PG G GP G G+
Sbjct: 98 VGVEGPKGGPGPQGPRGPVGPPGR 121
Score = 30.4 bits (67), Expect = 1.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G RG+ G GA GP G +G
Sbjct: 303 GPPGTAGARGNDGAVGAAGPPGPTG 327
Score = 30.4 bits (67), Expect = 1.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G+PG G G G +G
Sbjct: 366 GPAGAAGPAGNPGADGQPGAKGANG 390
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G+ G RG PG PG G G G
Sbjct: 291 GPRGLPGERGRPGPPGTAGARGNDG 315
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP+G GPRG G G GP G G
Sbjct: 1147 LPGPIGPPGPRGRTGDSGPAGPPGPPG 1173
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTG 160
+G G SGP G PG PG GP G
Sbjct: 1157 RGRTGDSGPAGPPGPPGPPGPPG 1179
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G PG+PG GP G G
Sbjct: 117 GPPGRDGIPGQPGLPGPPGPPGPPG 141
Score = 29.6 bits (65), Expect = 2.2
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GPRG PG PG G G +GK
Sbjct: 201 GGSGPMGPRGPPGPPGKNGDDGEAGK 226
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+QGP G +G G G G GP+GL G
Sbjct: 445 VQGPPGPAGEEGKRGARGEPGPSGLPG 471
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP GI+G RG G+PG G G G
Sbjct: 939 GPQGIAGQRGVVGLPGQRGERGFPG 963
Score = 29.3 bits (64), Expect = 2.9
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GPVG G G PG PG GP G G
Sbjct: 113 RGPVGPPGRDGIPGQPGLPGPPGPPG 138
Score = 29.3 bits (64), Expect = 2.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G G+ G+PG +G G SG
Sbjct: 639 GPPGEAGKPGEQGVPGDLGAPGPSG 663
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G G PGA G G +G
Sbjct: 798 GPAGFAGPPGADGQPGAKGEPGDTG 822
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+GP G +GP G PG G GP G +G+
Sbjct: 896 KGPRGETGPAGRPGEVGPPGPPGPAGE 922
Score = 29.3 bits (64), Expect = 2.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
I+G G SG +G PG PG+ G G SG
Sbjct: 1096 IKGHRGFSGLQGPPGSPGSPGEQGPSG 1122
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G+ GP G PG G GP G G+
Sbjct: 174 GPRGLPGPPGAPGPQGFQGPPGEPGE 199
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
QG G GP+G G PG GP G +G
Sbjct: 347 QGARGSEGPQGVRGEPGPPGPAGAAG 372
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G G G PG PGA GP+G G
Sbjct: 386 KGANGAPGIAGAPGFPGARGPSGPQG 411
Score = 28.9 bits (63), Expect = 3.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GP G+ G PG GP G G+
Sbjct: 489 GVAGPKGPSGERGAPGPAGPKGSPGE 514
Score = 28.9 bits (63), Expect = 3.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G G RG G+ G GP G +G+
Sbjct: 555 GPAGPPGARGQAGVMGFPGPKGTAGE 580
Score = 28.9 bits (63), Expect = 3.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G +G+ G G GPTG G
Sbjct: 762 GPAGAPGDKGEAGPSGPPGPTGARG 786
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G RG PG G GP G +G
Sbjct: 777 GPPGPTGARGAPGDRGEAGPPGPAG 801
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G VG GP G+ G PG GP G G
Sbjct: 870 GRVGPPGPSGNAGPPGPPGPVGKEG 894
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G SG G PG PG +G G G
Sbjct: 873 GPPGPSGNAGPPGPPGPVGKEGGKG 897
Score = 28.5 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G PG GA G G G
Sbjct: 324 GPTGPTGPPGFPGAVGAKGEAGPQG 348
Score = 28.5 bits (62), Expect = 5.0
Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Frame = +2
Query: 2 PGSTGIEXXXXXXXXXXXXXXXXXXXXXXIQGPVGISGPRGDPGIPGA---IGPTGLSGK 172
PG+TG++ + GP G G G G PGA GP G SG+
Sbjct: 440 PGATGVQGPPGPAGEEGKRGARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPSGE 499
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G +G GP+G G PG G GL G
Sbjct: 567 GVMGFPGPKGTAGEPGKAGERGLPG 591
Score = 28.5 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +2
Query: 95 GPVGISGPRGDP---GIPGAIGPTGLSGK 172
G G GP G P G+PG GP G +GK
Sbjct: 618 GERGEQGPAGSPGFQGLPGPAGPPGEAGK 646
Score = 28.5 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GPVG +G GD G G GP G G
Sbjct: 1044 GPVGPAGKNGDRGETGPAGPAGPIG 1068
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G RG+ G G GP G +G
Sbjct: 1047 GPAGKNGDRGETGPAGPAGPIGPAG 1071
Score = 28.5 bits (62), Expect = 5.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+QGP G G G+ G GA GP G G
Sbjct: 1105 LQGPPGSPGSPGEQGPSGASGPAGPRG 1131
Score = 28.5 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G G PG G GL G
Sbjct: 1125 GPAGPRGPPGSAGSPGKDGLNGLPG 1149
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G PG GA G G++G
Sbjct: 372 GPAGNPGADGQPGAKGANGAPGIAG 396
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G++GP+G G GA GP G G
Sbjct: 486 GADGVAGPKGPSGERGAPGPAGPKG 510
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GP G G PG GP G G+
Sbjct: 540 GKTGPPGPAGQDGRPGPAGPPGARGQ 565
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G G G G PG GP G G+
Sbjct: 597 GPAGKDGEAGAQGAPGPAGPAGERGE 622
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G RG PG G GP G +G
Sbjct: 660 GPSGARGERGFPGERGVQGPPGPAG 684
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GPRG G PGA G G +G+
Sbjct: 846 GAPGPKGPRGAAGPPGATGFPGAAGR 871
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
Frame = +2
Query: 95 GPVGISGPRGDPGI------PGAIGPTGLSGK 172
GP G +G +G PG PG GP G++G+
Sbjct: 915 GPPGPAGEKGSPGADGPAGSPGTPGPQGIAGQ 946
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G G RG+PG PG G G +G
Sbjct: 350 RGSEGPQGVRGEPGPPGPAGAAGPAG 375
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G +GP+G PG G G GL G
Sbjct: 500 RGAPGPAGPKGSPGEAGRPGEAGLPG 525
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G G+ GP+GD G G G G GK
Sbjct: 722 RGAAGLPGPKGDRGDAGPKGADGSPGK 748
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G GD G G GP G +G
Sbjct: 780 GPTGARGAPGDRGEAGPPGPAGFAG 804
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G +G +GD G PG GP G G
Sbjct: 815 KGEPGDTGVKGDAGPPGPAGPAGPPG 840
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
++G G GP G G PG IG G G
Sbjct: 823 VKGDAGPPGPAGPAGPPGPIGNVGAPG 849
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G GP G PG PG G G G
Sbjct: 923 KGSPGADGPAGSPGTPGPQGIAGQRG 948
>sp|Q9XSJ7|CO1A1_CANFA Collagen alpha 1(I) chain precursor
Length = 1460
Score = 39.7 bits (91), Expect = 0.002
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP+G SGPRG PG PGA GP G G
Sbjct: 173 VPGPMGPSGPRGLPGPPGAPGPQGFQG 199
Score = 35.8 bits (81), Expect = 0.031
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G+PG PGA GP G G
Sbjct: 193 GPQGFQGPPGEPGEPGASGPMGPRG 217
Score = 35.0 bits (79), Expect = 0.053
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G PG PGA+G G +G
Sbjct: 328 GPPGPTGPAGPPGFPGAVGAKGEAG 352
Score = 35.0 bits (79), Expect = 0.053
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G G +GP G PG PGA GP G +GK
Sbjct: 1032 RGETGPAGPPGAPGAPGAPGPVGPAGK 1058
Score = 33.1 bits (74), Expect = 0.20
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G +G RG PG PGA+GP G G+
Sbjct: 586 GEPGKAGERGVPGPPGAVGPAGKDGE 611
Score = 33.1 bits (74), Expect = 0.20
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G VG+ G RG+ G PG GP+G GK
Sbjct: 954 RGVVGLPGQRGERGFPGLPGPSGEPGK 980
Score = 33.1 bits (74), Expect = 0.20
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2
Query: 92 QGPVGISGPRGDP---GIPGAIGPTGLSGK 172
QGP G SG RG P G PG GP G SG+
Sbjct: 981 QGPSGTSGERGPPGPMGPPGLAGPPGESGR 1010
Score = 33.1 bits (74), Expect = 0.20
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G+ GP G PG PG GP+G SG
Sbjct: 1107 RGFSGLQGPPGPPGSPGEQGPSGASG 1132
Score = 32.7 bits (73), Expect = 0.26
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G+ G PGA GP G G
Sbjct: 919 GPPGPPGPAGEKGSPGADGPAGAPG 943
Score = 32.7 bits (73), Expect = 0.26
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G PG PG +GP G +G
Sbjct: 1036 GPAGPPGAPGAPGAPGPVGPAGKNG 1060
Score = 32.3 bits (72), Expect = 0.35
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP+G GP G PG G GP+G +G
Sbjct: 761 LTGPIGPPGPAGAPGDKGEAGPSGPAG 787
Score = 31.6 bits (70), Expect = 0.59
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
IQGP G +G G G G GPTGL G
Sbjct: 452 IQGPPGPAGEEGKRGARGEPGPTGLPG 478
Score = 31.6 bits (70), Expect = 0.59
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
QGP G SGP G G PG+ G G G
Sbjct: 1125 QGPSGASGPAGPRGPPGSAGSPGKDG 1150
Score = 31.6 bits (70), Expect = 0.59
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP+G GPRG G G +GP G G
Sbjct: 1154 LPGPIGPPGPRGRTGDAGPVGPPGPPG 1180
Score = 31.2 bits (69), Expect = 0.77
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 6/33 (18%)
Frame = +2
Query: 92 QGPVGISGPRGDPG------IPGAIGPTGLSGK 172
+G G +GP+G+PG PG +GP GL G+
Sbjct: 273 KGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGE 305
Score = 31.2 bits (69), Expect = 0.77
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2
Query: 92 QGPVGISGPRG---DPGIPGAIGPTGLSGK 172
QGP G GP+G +PG PG G TG G+
Sbjct: 417 QGPSGPPGPKGNSGEPGAPGNKGDTGAKGE 446
Score = 31.2 bits (69), Expect = 0.77
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+QGP G +GPRG G PG G G +G
Sbjct: 683 VQGPPGPAGPRGANGAPGNDGAKGDAG 709
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GP G+ G G PG GA GP G G
Sbjct: 360 EGPQGVRGEPGPPGPAGAAGPAGNPG 385
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G GD G PG GP G +G
Sbjct: 787 GPTGARGAPGDRGEPGPPGPAGFAG 811
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GP G GPRGD G G G G+ G
Sbjct: 1080 RGPAGPQGPRGDKGETGEQGDRGIKG 1105
Score = 30.4 bits (67), Expect = 1.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G+ G RG PG PG G G G
Sbjct: 298 GPRGLPGERGRPGAPGPAGARGNDG 322
Score = 30.4 bits (67), Expect = 1.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G+PG G G G +G
Sbjct: 373 GPAGAAGPAGNPGADGQPGAKGANG 397
Score = 30.0 bits (66), Expect = 1.7
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GPRG PG PG G G +GK
Sbjct: 208 GASGPMGPRGPPGPPGKNGDDGEAGK 233
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G +G +GD G PG GPTG G
Sbjct: 822 KGEPGDAGAKGDAGPPGPAGPTGPPG 847
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G PG+PG GP G G
Sbjct: 123 GPPGRDGIPGQPGLPGPPGPPGPPG 147
Score = 29.6 bits (65), Expect = 2.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G +G+ G G GPTG G
Sbjct: 769 GPAGAPGDKGEAGPSGPAGPTGARG 793
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP GI+G RG G+PG G G G
Sbjct: 946 GPQGIAGQRGVVGLPGQRGERGFPG 970
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G PG PGA G G+ G
Sbjct: 553 GPAGQDGRPGPPGPPGARGQAGVMG 577
Score = 29.3 bits (64), Expect = 2.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G G+ G+PG +G G SG
Sbjct: 646 GPPGEAGKPGEQGVPGDLGAPGPSG 670
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G G PGA G G +G
Sbjct: 805 GPAGFAGPPGADGQPGAKGEPGDAG 829
Score = 28.9 bits (63), Expect = 3.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
Q G+ GP+GD G G GP G G+
Sbjct: 101 QETTGVEGPKGDTGPRGPRGPAGPPGR 127
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G+ GP G PG G GP G G+
Sbjct: 181 GPRGLPGPPGAPGPQGFQGPPGEPGE 206
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
QG G GP+G G PG GP G +G
Sbjct: 354 QGARGSEGPQGVRGEPGPPGPAGAAG 379
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G G G PG PGA GP+G G
Sbjct: 393 KGANGAPGIAGAPGFPGARGPSGPQG 418
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP G GP G G GA GP G +G
Sbjct: 596 VPGPPGAVGPAGKDGEAGAQGPPGPAG 622
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G RG PG G GP G +G
Sbjct: 784 GPAGPTGARGAPGDRGEPGPPGPAG 808
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G VG GP G+ G PG GP G G
Sbjct: 877 GRVGPPGPSGNAGPPGPPGPAGKEG 901
Score = 28.9 bits (63), Expect = 3.8
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
I+G G SG +G PG PG+ G G SG
Sbjct: 1103 IKGHRGFSGLQGPPGPPGSPGEQGPSG 1129
Score = 28.5 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G PG GA G G G
Sbjct: 331 GPTGPAGPPGFPGAVGAKGEAGPQG 355
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G+ GP G+ G PG+ G G G
Sbjct: 472 GPTGLPGPPGERGGPGSRGFPGADG 496
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GP G+ G PG GP G G+
Sbjct: 496 GVAGPKGPAGERGSPGPAGPKGSPGE 521
Score = 28.5 bits (62), Expect = 5.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 12/39 (30%)
Frame = +2
Query: 92 QGPVGISGPRGD------------PGIPGAIGPTGLSGK 172
QGP G +GP G+ G+PG GP G +GK
Sbjct: 615 QGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGK 653
Score = 28.5 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GPVG +G GD G G GP G G
Sbjct: 1051 GPVGPAGKNGDRGETGPAGPAGPIG 1075
Score = 28.5 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G G PG G GL G
Sbjct: 1132 GPAGPRGPPGSAGSPGKDGLNGLPG 1156
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G PG GA G G++G
Sbjct: 379 GPAGNPGADGQPGAKGANGAPGIAG 403
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G G RG G+ G GP G +G+
Sbjct: 562 GPPGPPGARGQAGVMGFPGPKGAAGE 587
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G RG PG G GP G +G
Sbjct: 667 GPSGARGERGFPGERGVQGPPGPAG 691
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
Frame = +2
Query: 95 GPVGISGPRGDP------GIPGAIGPTGLSGK 172
GP G +G +G P G PG GP G++G+
Sbjct: 922 GPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQ 953
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+QGP G G G+ G GA GP G G
Sbjct: 1112 LQGPPGPPGSPGEQGPSGASGPAGPRG 1138
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTG 160
+G G +GP G PG PG GP G
Sbjct: 1164 RGRTGDAGPVGPPGPPGPPGPPG 1186
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G G RG+PG PG G G +G
Sbjct: 357 RGSEGPQGVRGEPGPPGPAGAAGPAG 382
Score = 27.7 bits (60), Expect = 8.5
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +2
Query: 2 PGSTGIEXXXXXXXXXXXXXXXXXXXXXXIQGPVGISGPRGDPGIPGAIGPTGLSG 169
PG TGI+ + GP G G G G PGA G G G
Sbjct: 447 PGPTGIQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKG 502
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSGK 172
+ GP G +G RG PG G G G +G+
Sbjct: 497 VAGPKGPAGERGSPGPAGPKGSPGEAGR 524
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G +GP+G PG G G GL G
Sbjct: 507 RGSPGPAGPKGSPGEAGRPGEAGLPG 532
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G G+ GP+GD G G G G GK
Sbjct: 729 RGAAGLPGPKGDRGDAGPKGADGSPGK 755
Score = 27.7 bits (60), Expect = 8.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G G GA GP G G
Sbjct: 838 GPAGPTGPPGPIGNVGAPGPKGARG 862
>sp||P02459_1 [Segment 1 of 2] Collagen alpha 1(II) chain precursor
Length = 566
Score = 39.7 bits (91), Expect = 0.002
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GP G GPRG+PG PG+ GP G +G
Sbjct: 198 RGPEGAQGPRGEPGTPGSPGPAGAAG 223
Score = 35.4 bits (80), Expect = 0.041
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G+ GPRG PG PG GP G SG
Sbjct: 526 GAQGLQGPRGLPGTPGTDGPKGASG 550
Score = 33.1 bits (74), Expect = 0.20
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSGK 172
I G G GPRG PG GA GP G G+
Sbjct: 242 IAGAPGFPGPRGPPGPQGATGPLGPKGQ 269
Score = 32.3 bits (72), Expect = 0.35
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSGK 172
+ GP+G GP G PG PG G G GK
Sbjct: 50 VSGPMGPRGPPGPPGKPGDDGEAGKPGK 77
Score = 32.3 bits (72), Expect = 0.35
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Frame = +2
Query: 95 GPVGISGPRGDPG---IPGAIGPTGLSGK 172
G GI+GP+G PG PGA+GP G G+
Sbjct: 334 GQDGIAGPKGPPGERGSPGAVGPKGSPGE 362
Score = 31.6 bits (70), Expect = 0.59
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G +G GPRG PG GA GP G G
Sbjct: 16 GVMGPMGPRGPPGPAGAPGPQGFQG 40
Score = 31.6 bits (70), Expect = 0.59
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G PG PGA G G +G
Sbjct: 169 GPPGPVGPAGGPGFPGAPGAKGEAG 193
Score = 31.6 bits (70), Expect = 0.59
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G G RG PG+ G GP G +G+
Sbjct: 403 GPPGPQGARGQPGVMGFPGPKGANGE 428
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G+PG PG GP G G
Sbjct: 34 GPQGFQGNPGEPGEPGVSGPMGPRG 58
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G RG+ G PG GP G G
Sbjct: 151 GPAGAAGARGNDGQPGPAGPPGPVG 175
Score = 30.8 bits (68), Expect = 1.0
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGA---IGPTGLSG 169
GPVG +G G PG PGA GPTG G
Sbjct: 172 GPVGPAGGPGFPGAPGAKGEAGPTGARG 199
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G+ G GA GP+G G
Sbjct: 457 GPPGPAGPAGERGEQGAPGPSGFQG 481
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP+G G PG G G+SG
Sbjct: 28 GPAGAPGPQGFQGNPGEPGEPGVSG 52
Score = 30.0 bits (66), Expect = 1.7
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
QG VG SG G+ G PG GP G G+
Sbjct: 387 QGKVGPSGAPGEDGRPGPPGPQGARGQ 413
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G GD G+PG G GL G
Sbjct: 487 GPPGEGGKPGDQGVPGEAGAPGLVG 511
Score = 29.6 bits (65), Expect = 2.2
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GPRG PG PG G G +GK
Sbjct: 49 GVSGPMGPRGPPGPPGKPGDDGEAGK 74
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G G RG G PG GP G G+
Sbjct: 298 GPAGEEGKRGARGEPGGAGPAGPPGE 323
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G RG+ G PG G GL G
Sbjct: 460 GPAGPAGERGEQGAPGPSGFQGLPG 484
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G G GP G G+PG GP G GK
Sbjct: 468 RGEQGAPGPSGFQGLPGPPGPPGEGGK 494
Score = 29.6 bits (65), Expect = 2.2
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G SGP G PGA GP GL G
Sbjct: 544 GPKGASGPAGP---PGAQGPPGLQG 565
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G G GIPGA G G G
Sbjct: 217 GPAGAAGNPGTDGIPGAKGSAGAPG 241
Score = 29.3 bits (64), Expect = 2.9
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +2
Query: 89 IQGPVGISGPRGDP---GIPGAIGPTGLSGK 172
I G G GP+G+P G+ GA GP G GK
Sbjct: 275 IAGFKGEQGPKGEPGPAGVQGAPGPAGEEGK 305
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G G RG PG G GP GL G
Sbjct: 513 RGERGFPGERGSPGAQGLQGPRGLPG 538
Score = 28.9 bits (63), Expect = 3.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G+ GPRG+ G PG G G G
Sbjct: 505 GAPGLVGPRGERGFPGERGSPGAQG 529
Score = 28.5 bits (62), Expect = 5.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G SG G+ G PG +GP GL G+
Sbjct: 121 GVKGESGSPGZBGSPGPMGPRGLPGE 146
Score = 28.5 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G G GPRG PG G GP G +G
Sbjct: 133 GSPGPMGPRGLPGERGRTGPAGAAG 157
Score = 28.5 bits (62), Expect = 5.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+QGP G+ G G G GA GP G G
Sbjct: 530 LQGPRGLPGTPGTDGPKGASGPAGPPG 556
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
QGP G GP G G PG G G G
Sbjct: 282 QGPKGEPGPAGVQGAPGPAGEEGKRG 307
Score = 27.7 bits (60), Expect = 8.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G GP G PG G G G SG+
Sbjct: 55 GPRGPPGPPGKPGDDGEAGKPGKSGE 80
Score = 27.7 bits (60), Expect = 8.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GP G G RG PG PG G G G
Sbjct: 81 RGPPGPQGARGFPGTPGLPGVKGHRG 106
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP+G G G+PGI G G G G+
Sbjct: 262 GPLGPKGQTGEPGIAGFKGEQGPKGE 287
Score = 27.7 bits (60), Expect = 8.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G PG G GP G G
Sbjct: 385 GPQGKVGPSGAPGEDGRPGPPGPQG 409
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G +G GP+G G PG G GL G
Sbjct: 415 GVMGFPGPKGANGEPGKAGEKGLPG 439
>sp||P02454_1 [Segment 1 of 2] Collagen alpha 1(I) chain
Length = 567
Score = 39.7 bits (91), Expect = 0.002
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP+G SGPRG PG PGA GP G G
Sbjct: 15 VPGPMGPSGPRGLPGPPGAPGPQGFQG 41
Score = 35.8 bits (81), Expect = 0.031
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G+PG PGA GP G G
Sbjct: 35 GPQGFQGPPGEPGEPGASGPMGPRG 59
Score = 33.5 bits (75), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G PG PGA G G +G
Sbjct: 170 GPPGPTGPTGPPGFPGAAGAKGEAG 194
Score = 33.1 bits (74), Expect = 0.20
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G +G RG PG PGA+GP G G+
Sbjct: 428 GEPGKAGERGVPGPPGAVGPAGKDGE 453
Score = 32.3 bits (72), Expect = 0.35
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+QGP G +GPRG+ G PG G G +G
Sbjct: 525 VQGPPGPAGPRGNNGAPGNDGAKGDTG 551
Score = 32.0 bits (71), Expect = 0.45
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G RGD G GA GP G +G
Sbjct: 152 GPPGSAGARGDDGAVGAAGPPGPTG 176
Score = 32.0 bits (71), Expect = 0.45
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2
Query: 92 QGPVGISGPR---GDPGIPGAIGPTGLSGK 172
QGP G GP+ G+PG PG G TG G+
Sbjct: 259 QGPSGAPGPKGNSGEPGAPGNKGDTGAKGE 288
Score = 30.8 bits (68), Expect = 1.0
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 6/33 (18%)
Frame = +2
Query: 92 QGPVGISGPRGDP------GIPGAIGPTGLSGK 172
+G G +GP+G+P G PG +GP GL G+
Sbjct: 115 KGNTGPAGPKGEPGSPGENGAPGQMGPRGLPGE 147
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GP G+ G G PG GA GP G G
Sbjct: 202 EGPQGVRGEPGPPGPAGAAGPAGNPG 227
Score = 30.4 bits (67), Expect = 1.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G+PG G G G +G
Sbjct: 215 GPAGAAGPAGNPGADGQPGAKGANG 239
Score = 30.0 bits (66), Expect = 1.7
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GPRG PG PG G G +GK
Sbjct: 50 GASGPMGPRGPPGPPGKNGDDGEAGK 75
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G+ G RG PG PG+ G G G
Sbjct: 140 GPRGLPGERGRPGPPGSAGARGDDG 164
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+QGP G +G G G G GP+GL G
Sbjct: 294 VQGPPGPAGEEGKRGARGEPGPSGLPG 320
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G+ GP G PG G GP G G+
Sbjct: 23 GPRGLPGPPGAPGPQGFQGPPGEPGE 48
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G PG GA G G G
Sbjct: 173 GPTGPTGPPGFPGAAGAKGEAGPQG 197
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
QG G GP+G G PG GP G +G
Sbjct: 196 QGARGSEGPQGVRGEPGPPGPAGAAG 221
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G G G PG PGA GP+G G
Sbjct: 235 KGANGAPGIAGAPGFPGARGPSGPQG 260
Score = 28.9 bits (63), Expect = 3.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G G RG G+ G GP G +G+
Sbjct: 404 GPAGPPGARGQAGVMGFPGPKGTAGE 429
Score = 28.9 bits (63), Expect = 3.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G G+ G+PG +G G SG
Sbjct: 488 GPPGEAGKPGZZGVPGDLGAPGPSG 512
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GP G+ G PG GP G G+
Sbjct: 338 GVAGPKGPAGERGSPGPAGPKGSPGE 363
Score = 28.5 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +2
Query: 95 GPVGISGPRGDP---GIPGAIGPTGLSGK 172
G G GP G P G+PG GP G +GK
Sbjct: 467 GERGEQGPAGSPGFQGLPGPAGPPGEAGK 495
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G PG GA G G++G
Sbjct: 221 GPAGNPGADGQPGAKGANGAPGIAG 245
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GP G+ G PG GP G G+
Sbjct: 389 GKTGPPGPAGZBGRPGPAGPPGARGQ 414
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G G G G PG GP G G+
Sbjct: 446 GPAGKDGEAGAQGAPGPAGPAGERGE 471
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G RG PG G GP G +G
Sbjct: 509 GPSGARGERGFPGERGVQGPPGPAG 533
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G G RG+PG PG G G +G
Sbjct: 199 RGSEGPQGVRGEPGPPGPAGAAGPAG 224
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G+ GP G+ G PG+ G G G
Sbjct: 314 GPSGLPGPPGERGGPGSRGFPGADG 338
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSGK 172
+ GP G +G RG PG G G G +G+
Sbjct: 339 VAGPKGPAGERGSPGPAGPKGSPGEAGR 366
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G +GP+G PG G G GL G
Sbjct: 349 RGSPGPAGPKGSPGEAGRPGEAGLPG 374
>sp|P02452|CO1A1_HUMAN Collagen alpha 1(I) chain precursor
Length = 1464
Score = 39.7 bits (91), Expect = 0.002
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP+G SGPRG PG PGA GP G G
Sbjct: 177 VPGPMGPSGPRGLPGPPGAPGPQGFQG 203
Score = 35.8 bits (81), Expect = 0.031
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G+PG PGA GP G G
Sbjct: 197 GPQGFQGPPGEPGEPGASGPMGPRG 221
Score = 35.0 bits (79), Expect = 0.053
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G PG PGA+G G +G
Sbjct: 332 GPPGPTGPAGPPGFPGAVGAKGEAG 356
Score = 35.0 bits (79), Expect = 0.053
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G G +GP G PG PGA GP G +GK
Sbjct: 1036 RGETGPAGPPGAPGAPGAPGPVGPAGK 1062
Score = 33.9 bits (76), Expect = 0.12
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G PG PG +GP G SG
Sbjct: 1040 GPAGPPGAPGAPGAPGPVGPAGKSG 1064
Score = 33.1 bits (74), Expect = 0.20
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G +G RG PG PGA+GP G G+
Sbjct: 590 GEPGKAGERGVPGPPGAVGPAGKDGE 615
Score = 33.1 bits (74), Expect = 0.20
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G VG+ G RG+ G PG GP+G GK
Sbjct: 958 RGVVGLPGQRGERGFPGLPGPSGEPGK 984
Score = 33.1 bits (74), Expect = 0.20
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2
Query: 92 QGPVGISGPRGDP---GIPGAIGPTGLSGK 172
QGP G SG RG P G PG GP G SG+
Sbjct: 985 QGPSGASGERGPPGPMGPPGLAGPPGESGR 1014
Score = 33.1 bits (74), Expect = 0.20
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G+ GP G PG PG GP+G SG
Sbjct: 1111 RGFSGLQGPPGPPGSPGEQGPSGASG 1136
Score = 32.7 bits (73), Expect = 0.26
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G+ G PGA GP G G
Sbjct: 923 GPPGPPGPAGEKGSPGADGPAGAPG 947
Score = 32.3 bits (72), Expect = 0.35
Identities = 17/29 (58%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +2
Query: 92 QGPVGIS---GPRGDPGIPGAIGPTGLSG 169
QGP G S GPRG PG GA G GL+G
Sbjct: 1129 QGPSGASGPAGPRGPPGSAGAPGKDGLNG 1157
Score = 32.0 bits (71), Expect = 0.45
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
QGP G GP+G G PG GP G +G
Sbjct: 358 QGPRGSEGPQGVRGEPGPPGPAGAAG 383
Score = 32.0 bits (71), Expect = 0.45
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +2
Query: 92 QGPVGISGPRG---DPGIPGAIGPTGLSGK 172
QGP G GP+G +PG PG+ G TG G+
Sbjct: 421 QGPGGPPGPKGNSGEPGAPGSKGDTGAKGE 450
Score = 32.0 bits (71), Expect = 0.45
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP+G GP G PG G GP+G +G
Sbjct: 765 LTGPIGPPGPAGAPGDKGESGPSGPAG 791
Score = 31.6 bits (70), Expect = 0.59
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP+G GPRG G G +GP G G
Sbjct: 1158 LPGPIGPPGPRGRTGDAGPVGPPGPPG 1184
Score = 31.2 bits (69), Expect = 0.77
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 6/33 (18%)
Frame = +2
Query: 92 QGPVGISGPRGDPG------IPGAIGPTGLSGK 172
+G G +GP+G+PG PG +GP GL G+
Sbjct: 277 KGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGE 309
Score = 31.2 bits (69), Expect = 0.77
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+QGP G +G G G G GPTGL G
Sbjct: 456 VQGPPGPAGEEGKRGARGEPGPTGLPG 482
Score = 31.2 bits (69), Expect = 0.77
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+QGP G +GPRG G PG G G +G
Sbjct: 687 VQGPPGPAGPRGANGAPGNDGAKGDAG 713
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GP G+ G G PG GA GP G G
Sbjct: 364 EGPQGVRGEPGPPGPAGAAGPAGNPG 389
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G GD G PG GP G +G
Sbjct: 791 GPTGARGAPGDRGEPGPPGPAGFAG 815
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+GP G GPRGD G G G G+ G
Sbjct: 1084 RGPAGPQGPRGDKGETGEQGDRGIKG 1109
Score = 30.4 bits (67), Expect = 1.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G+ G RG PG PG G G G
Sbjct: 302 GPRGLPGERGRPGAPGPAGARGNDG 326
Score = 30.4 bits (67), Expect = 1.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G+PG G G G +G
Sbjct: 377 GPAGAAGPAGNPGADGQPGAKGANG 401
Score = 30.0 bits (66), Expect = 1.7
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GPRG PG PG G G +GK
Sbjct: 212 GASGPMGPRGPPGPPGKNGDDGEAGK 237
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G SG RG+ G G GP G +G
Sbjct: 1058 GPAGKSGDRGETGPAGPAGPVGPAG 1082
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G PG+PG GP G G
Sbjct: 127 GPPGRDGIPGQPGLPGPPGPPGPPG 151
Score = 29.6 bits (65), Expect = 2.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G +G+ G G GPTG G
Sbjct: 773 GPAGAPGDKGESGPSGPAGPTGARG 797
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP GI+G RG G+PG G G G
Sbjct: 950 GPQGIAGQRGVVGLPGQRGERGFPG 974
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G PG PGA G G+ G
Sbjct: 557 GPAGQDGRPGPPGPPGARGQAGVMG 581
Score = 29.3 bits (64), Expect = 2.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G G+ G+PG +G G SG
Sbjct: 650 GPPGEAGKPGEQGVPGDLGAPGPSG 674
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G G PGA G G +G
Sbjct: 809 GPAGFAGPPGADGQPGAKGEPGDAG 833
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G+ G PGA G G +G
Sbjct: 845 GPAGPPGPIGNVGAPGAKGARGSAG 869
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+GP G +GP G PG G GP G +G+
Sbjct: 907 KGPRGETGPAGRPGEVGPPGPPGPAGE 933
Score = 28.9 bits (63), Expect = 3.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
Q G+ GP+GD G G GP G G+
Sbjct: 105 QETTGVEGPKGDTGPRGPRGPAGPPGR 131
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G+ GP G PG G GP G G+
Sbjct: 185 GPRGLPGPPGAPGPQGFQGPPGEPGE 210
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G G G PG PGA GP+G G
Sbjct: 397 KGANGAPGIAGAPGFPGARGPSGPQG 422
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP G GP G G GA GP G +G
Sbjct: 600 VPGPPGAVGPAGKDGEAGAQGPPGPAG 626
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +G RG PG G GP G +G
Sbjct: 788 GPAGPTGARGAPGDRGEPGPPGPAG 812
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
G VG GP G+ G PG GP G G
Sbjct: 881 GRVGPPGPSGNAGPPGPPGPAGKEG 905
Score = 28.9 bits (63), Expect = 3.8
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
I+G G SG +G PG PG+ G G SG
Sbjct: 1107 IKGHRGFSGLQGPPGPPGSPGEQGPSG 1133
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G G PG G GL G
Sbjct: 1136 GPAGPRGPPGSAGAPGKDGLNGLPG 1160
Score = 28.5 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G PG GA G G G
Sbjct: 335 GPTGPAGPPGFPGAVGAKGEAGPQG 359
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G+ GP G+ G PG+ G G G
Sbjct: 476 GPTGLPGPPGERGGPGSRGFPGADG 500
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GP G+ G PG GP G G+
Sbjct: 500 GVAGPKGPAGERGSPGPAGPKGSPGE 525
Score = 28.5 bits (62), Expect = 5.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 12/39 (30%)
Frame = +2
Query: 92 QGPVGISGPRGD------------PGIPGAIGPTGLSGK 172
QGP G +GP G+ G+PG GP G +GK
Sbjct: 619 QGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGK 657
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G++GP G+ G GA G G G+
Sbjct: 1001 GPPGLAGPPGESGREGAPGAEGSPGR 1026
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G G PG GA G G++G
Sbjct: 383 GPAGNPGADGQPGAKGANGAPGIAG 407
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G G RG G+ G GP G +G+
Sbjct: 566 GPPGPPGARGQAGVMGFPGPKGAAGE 591
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G G RG PG G GP G +G
Sbjct: 671 GPSGARGERGFPGERGVQGPPGPAG 695
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G +G +GD G PG GP G G
Sbjct: 826 KGEPGDAGAKGDAGPPGPAGPAGPPG 851
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G +GP G PG G +G G G
Sbjct: 839 GPPGPAGPAGPPGPIGNVGAPGAKG 863
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
Frame = +2
Query: 95 GPVGISGPRGDP------GIPGAIGPTGLSGK 172
GP G +G +G P G PG GP G++G+
Sbjct: 926 GPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQ 957
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GPVG +G GD G G GP G G
Sbjct: 1055 GPVGPAGKSGDRGETGPAGPAGPVG 1079
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+QGP G G G+ G GA GP G G
Sbjct: 1116 LQGPPGPPGSPGEQGPSGASGPAGPRG 1142
Score = 28.1 bits (61), Expect = 6.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTG 160
+G G +GP G PG PG GP G
Sbjct: 1168 RGRTGDAGPVGPPGPPGPPGPPG 1190
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSGK 172
+ GP G +G RG PG G G G +G+
Sbjct: 501 VAGPKGPAGERGSPGPAGPKGSPGEAGR 528
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G +GP+G PG G G GL G
Sbjct: 511 RGSPGPAGPKGSPGEAGRPGEAGLPG 536
Score = 27.7 bits (60), Expect = 8.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSGK 172
+G G+ GP+GD G G G G GK
Sbjct: 733 RGAAGLPGPKGDRGDAGPKGADGSPGK 759
>sp|P02456|CA11_RABIT Collagen alpha 1(I) chain
Length = 53
Score = 39.7 bits (91), Expect = 0.002
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP+G SGPRG PG PGA GP G G
Sbjct: 13 VPGPMGPSGPRGLPGPPGAPGPZGFZG 39
Score = 31.6 bits (70), Expect = 0.59
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGP 154
GP G GP G+PG PG+ GP
Sbjct: 33 GPZGFZGPPGZPGZPGSSGP 52
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G+ GP G PG G GP G G+
Sbjct: 21 GPRGLPGPPGAPGPZGFZGPPGZPGZ 46
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP G GP G G PG G G SG
Sbjct: 25 LPGPPGAPGPZGFZGPPGZPGZPGSSG 51
>sp||P02453_1 [Segment 1 of 2] Collagen alpha 1(I) chain
Length = 145
Score = 39.7 bits (91), Expect = 0.002
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 89 IQGPVGISGPRGDPGIPGAIGPTGLSG 169
+ GP+G SGPRG PG PGA GP G G
Sbjct: 15 VPGPMGPSGPRGLPGPPGAPGPQGFQG 41
Score = 35.8 bits (81), Expect = 0.031
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSG 169
GP G GP G+PG PGA GP G G
Sbjct: 35 GPQGFQGPPGEPGEPGASGPMGPRG 59
Score = 30.0 bits (66), Expect = 1.7
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
G G GPRG PG PG G G +GK
Sbjct: 50 GASGPMGPRGPPGPPGKNGDDGEAGK 75
Score = 30.0 bits (66), Expect = 1.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 92 QGPVGISGPRGDPGIPGAIGPTGLSG 169
+G G +GP+G+PG PG G G G
Sbjct: 115 KGDAGPAGPKGEPGSPGENGAPGQMG 140
Score = 28.9 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 95 GPVGISGPRGDPGIPGAIGPTGLSGK 172
GP G+ GP G PG G GP G G+
Sbjct: 23 GPRGLPGPPGAPGPQGFQGPPGEPGE 48
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,241,481
Number of Sequences: 369166
Number of extensions: 406043
Number of successful extensions: 15027
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13224
length of database: 68,354,980
effective HSP length: 30
effective length of database: 62,812,930
effective search space used: 1695949110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)