Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_E02
(521 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2) 253 1e-67
sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2) 252 4e-67
sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2) 252 4e-67
sp|P05086|EF2_MESAU Elongation factor 2 (EF-2) 252 4e-67
sp|P05197|EF2_RAT Elongation factor 2 (EF-2) 252 4e-67
sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2) 251 1e-66
sp|P13060|EF2_DROME Elongation factor 2 (EF-2) 249 2e-66
sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2) 245 4e-65
sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2) 214 1e-55
sp|O23755|EF2_BETVU Elongation factor 2 (EF-2) 213 3e-55
>sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2)
Length = 852
Score = 253 bits (647), Expect = 1e-67
Identities = 121/162 (74%), Positives = 135/162 (83%)
Frame = +3
Query: 3 MRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETAL 182
MRGVRFN+HDVTLHADAIHRGGGQIIPTARR FYASVLTA P LLEPVY EIQ PE A+
Sbjct: 691 MRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAV 750
Query: 183 GGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDH 362
GGIY LN+RRG +F E QV GTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDH
Sbjct: 751 GGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 810
Query: 363 WQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 488
WQ+ PG+PL+ +KP V DTRKRKGL E VP LD +LDK+
Sbjct: 811 WQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYLDKM 852
>sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2)
Length = 858
Score = 252 bits (643), Expect = 4e-67
Identities = 117/162 (72%), Positives = 134/162 (82%)
Frame = +3
Query: 3 MRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETAL 182
MRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y EIQ PE +
Sbjct: 697 MRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVV 756
Query: 183 GGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDH 362
GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDH
Sbjct: 757 GGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 816
Query: 363 WQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 488
WQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 817 WQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2)
Length = 858
Score = 252 bits (643), Expect = 4e-67
Identities = 117/162 (72%), Positives = 134/162 (82%)
Frame = +3
Query: 3 MRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETAL 182
MRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y EIQ PE +
Sbjct: 697 MRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVV 756
Query: 183 GGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDH 362
GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDH
Sbjct: 757 GGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 816
Query: 363 WQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 488
WQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 817 WQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P05086|EF2_MESAU Elongation factor 2 (EF-2)
Length = 858
Score = 252 bits (643), Expect = 4e-67
Identities = 117/162 (72%), Positives = 134/162 (82%)
Frame = +3
Query: 3 MRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETAL 182
MRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y EIQ PE +
Sbjct: 697 MRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVV 756
Query: 183 GGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDH 362
GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDH
Sbjct: 757 GGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 816
Query: 363 WQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 488
WQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 817 WQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P05197|EF2_RAT Elongation factor 2 (EF-2)
Length = 858
Score = 252 bits (643), Expect = 4e-67
Identities = 117/162 (72%), Positives = 134/162 (82%)
Frame = +3
Query: 3 MRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETAL 182
MRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y EIQ PE +
Sbjct: 697 MRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVV 756
Query: 183 GGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDH 362
GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDH
Sbjct: 757 GGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 816
Query: 363 WQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 488
WQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 817 WQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2)
Length = 858
Score = 251 bits (640), Expect = 1e-66
Identities = 116/162 (71%), Positives = 133/162 (82%)
Frame = +3
Query: 3 MRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETAL 182
MRGVRF++HDVTLHADAIHRGGGQIIPTARRC YA VLTA P L+EP+Y EIQ PE +
Sbjct: 697 MRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYACVLTAQPRLMEPIYLVEIQCPEQVV 756
Query: 183 GGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDH 362
GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDH
Sbjct: 757 GGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 816
Query: 363 WQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 488
WQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 817 WQILPGDPFDSASRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P13060|EF2_DROME Elongation factor 2 (EF-2)
Length = 844
Score = 249 bits (637), Expect = 2e-66
Identities = 116/162 (71%), Positives = 135/162 (83%)
Frame = +3
Query: 3 MRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETAL 182
+RGVRFNI+DVTLHADAIHRGGGQIIPT RRC YA+ +TA P L+EPVY CEIQ PE A+
Sbjct: 683 LRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAV 742
Query: 183 GGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDH 362
GGIY LN+RRG +F E QV GTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDH
Sbjct: 743 GGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 802
Query: 363 WQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 488
WQ+ PG+P +P SKP V+DTRKRKGL E +P L ++LDKL
Sbjct: 803 WQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDKL 844
>sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2)
Length = 858
Score = 245 bits (626), Expect = 4e-65
Identities = 115/162 (70%), Positives = 132/162 (81%)
Frame = +3
Query: 3 MRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETAL 182
MRGVRF++HDVTLHADAIHR GGQIIPTARRC YASVLTA P L+EP+Y EIQ PE +
Sbjct: 697 MRGVRFDVHDVTLHADAIHRRGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVV 756
Query: 183 GGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDH 362
GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDH
Sbjct: 757 GGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 816
Query: 363 WQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 488
WQ+ PG+P D S+ V +TRKRKGL E +P LD FLDKL
Sbjct: 817 WQILPGDPFDNSSRGSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2)
Length = 842
Score = 214 bits (544), Expect = 1e-55
Identities = 107/162 (66%), Positives = 120/162 (74%)
Frame = +3
Query: 3 MRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETAL 182
+R RFNI DV LHADAIHRGGGQIIPTARR YAS L ASP + EPV+ EIQ E A+
Sbjct: 681 LRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSENAM 740
Query: 183 GGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDH 362
GGIYS LNK+RG +FSE Q GTP Y +KAYLPVNESF FT ELR T GQAFPQ VFDH
Sbjct: 741 GGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFTGELRQATAGQAFPQLVFDH 800
Query: 363 WQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 488
W G+PLDP SKPG V + RKRKGL E+VP ++ D+L
Sbjct: 801 WSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYDRL 842
>sp|O23755|EF2_BETVU Elongation factor 2 (EF-2)
Length = 843
Score = 213 bits (541), Expect = 3e-55
Identities = 106/162 (65%), Positives = 120/162 (74%)
Frame = +3
Query: 3 MRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETAL 182
MRG+ F + DV LH DAIHRGGGQIIPTARR FYAS LTA P LLEPVY EIQ PE AL
Sbjct: 682 MRGICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPENAL 741
Query: 183 GGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDH 362
GGIYS LN++RG +F EMQ GTP Y +KAYLPV ESF F+S LRA T GQAFPQCVFDH
Sbjct: 742 GGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRASTSGQAFPQCVFDH 801
Query: 363 WQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 488
W++ P +PL+ S+ V RKRKGL E + L +F DKL
Sbjct: 802 WEMMPSDPLEAGSQASTLVSVIRKRKGLKEQMTPLSEFEDKL 843
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,153,477
Number of Sequences: 369166
Number of extensions: 1344443
Number of successful extensions: 2888
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2777
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3452909250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)