Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_D12
(857 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q4V328|GRAP1_HUMAN GRIP1-associated protein 1 (GRASP-1) 76 1e-13
sp|Q8VD04|GRAP1_MOUSE GRIP1-associated protein 1 (GRASP-1) ... 73 1e-12
sp|Q9JHZ4|GRAP1_RAT GRIP1-associated protein 1 (GRASP-1) 70 6e-12
sp|Q86RN8|MYSP_BOOMI Paramyosin 59 2e-08
sp|Q967Z0|MYSP_DERFA Paramyosin (Allergen Der f 11) (Antige... 57 5e-08
sp|Q49419|Y328_MYCGE Hypothetical protein MG328 56 1e-07
sp|Q9BMM8|MYSP_SARSC Paramyosin 55 2e-07
sp|P93203|MFP1_LYCES MAR binding filament-like protein 1 54 7e-07
sp|P38853|KEL1_YEAST Kelch repeats protein 1 53 9e-07
sp|Q8MUF6|MYSP_BLOTA Paramyosin (Allergen Blo t 11) 50 6e-06
>sp|Q4V328|GRAP1_HUMAN GRIP1-associated protein 1 (GRASP-1)
Length = 841
Score = 75.9 bits (185), Expect = 1e-13
Identities = 38/124 (30%), Positives = 73/124 (58%)
Frame = +1
Query: 52 QSISSSEFQRFQDQLISLKESKYKTEEKCEYLLRNLSQFEAKCSLLERELSKANDLKNRF 231
Q++S EFQR Q QL+ L+ + Y+ ++ L+ K + L++E SKA ++
Sbjct: 3 QALSEEEFQRMQAQLLELRTNNYQLSDELRKNGVELTSLRQKVAYLDKEFSKAQKALSKS 62
Query: 232 KSAKDMDILMNENQILRDRLSTIEGNFKLQNDVIRTECENLFSENERLKSQIETYKASQA 411
K A+++++L++EN++L+ +L + E +F+LQN + E L S+ E+L+ + + K A
Sbjct: 63 KKAQEVEVLLSENEMLQAKLHSQEEDFRLQNSTLMAEFSKLCSQMEQLEQENQQLKEGAA 122
Query: 412 SSNV 423
+ V
Sbjct: 123 GAGV 126
>sp|Q8VD04|GRAP1_MOUSE GRIP1-associated protein 1 (GRASP-1) (HCMV-interacting protein)
Length = 806
Score = 72.8 bits (177), Expect = 1e-12
Identities = 36/109 (33%), Positives = 67/109 (61%)
Frame = +1
Query: 52 QSISSSEFQRFQDQLISLKESKYKTEEKCEYLLRNLSQFEAKCSLLERELSKANDLKNRF 231
Q++S EFQR Q QL+ L+ + Y+ ++ LS K + L++E SKA ++
Sbjct: 3 QALSEEEFQRMQTQLLELRTNNYQLSDELRKNGVELSSLRQKVAYLDKEFSKAQKALSKS 62
Query: 232 KSAKDMDILMNENQILRDRLSTIEGNFKLQNDVIRTECENLFSENERLK 378
K A+++++L++EN++L+ +L + E +F+LQN + E L S+ E+L+
Sbjct: 63 KKAQEVEVLLSENEMLQAKLHSQEEDFRLQNSTLMAEFSKLCSQLEQLE 111
>sp|Q9JHZ4|GRAP1_RAT GRIP1-associated protein 1 (GRASP-1)
Length = 837
Score = 70.5 bits (171), Expect = 6e-12
Identities = 35/109 (32%), Positives = 66/109 (60%)
Frame = +1
Query: 52 QSISSSEFQRFQDQLISLKESKYKTEEKCEYLLRNLSQFEAKCSLLERELSKANDLKNRF 231
Q++S EFQR Q QL+ L+ + Y+ ++ LS K + L++E SKA ++
Sbjct: 3 QALSEEEFQRMQTQLLELRTNNYQLSDELRKNGVELSSLRQKVAYLDKEFSKAQKALSKS 62
Query: 232 KSAKDMDILMNENQILRDRLSTIEGNFKLQNDVIRTECENLFSENERLK 378
K A+++++L++E ++L+ +L + E +F+LQN + E L S+ E+L+
Sbjct: 63 KKAQEVEVLLSEKEMLQAKLHSQEEDFRLQNSTLMAEFSKLCSQLEQLE 111
>sp|Q86RN8|MYSP_BOOMI Paramyosin
Length = 873
Score = 58.9 bits (141), Expect = 2e-08
Identities = 53/250 (21%), Positives = 115/250 (46%), Gaps = 29/250 (11%)
Frame = +1
Query: 100 SLKESKYKTEEKCEYLLRNLSQFEAKCSLLERELSKANDLKNRFKSAKDMDILMNENQI- 276
SL+ S + E + E L L + +ER+L KAN +K+ + ++ + +++
Sbjct: 250 SLESSMHTLEVEIESLKVQLEEESEARLEVERQLVKANADAAAYKTKYETEVQAHADEVE 309
Query: 277 -LRDRLSTIEGNFKLQNDVIRTECENLFSENERLKSQIETY-----KASQASSNVTNKVE 438
LR +++ ++ Q + + T C NL + RL+S++E KA+ + N+ +V
Sbjct: 310 ELRRKMAQKISEYEEQLEALLTRCSNLEKQKSRLQSEVEVLIMDLEKATAHAQNLEKRVA 369
Query: 439 DI------VDSPVHQ-------------DHQYKIRYLQHEVTKLLDEKTNIENENQTLIN 561
+ + S V + +I+ LQHE K+ +++ ++ EN+ L++
Sbjct: 370 QLEKLNIDLKSKVEELTILLEQSQRELRQKVAEIQKLQHEYEKMREQRDALQRENKKLVD 429
Query: 562 DIKTLRESENELVNRINSLLNEKTKLTNKH---AMVEKEIDFLNLNHSKEIEDQISNHNA 732
D+ + + + R++ E +L N+ A KE + L K+ E + A
Sbjct: 430 DLSEAKSQLADAIRRLHEYELEIKRLENERDELAAAYKEAETLR----KQEEAKCQRLTA 485
Query: 733 QIETLKNEFD 762
++ +++E++
Sbjct: 486 ELAQVRHEYE 495
>sp|Q967Z0|MYSP_DERFA Paramyosin (Allergen Der f 11) (Antigen Df642)
Length = 692
Score = 57.4 bits (137), Expect = 5e-08
Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 26/248 (10%)
Frame = +1
Query: 100 SLKESKYKTEEKCEYLLRNLSQFEAKCSLLERELSKANDLKNRFKSAKDMDILMNENQI- 276
SL+ + E + E L L + LER+L+KAN +KS + ++ + +++
Sbjct: 166 SLENHAHTLEVELESLKVQLDEESEARLELERQLTKANGDAASWKSKYEAELQAHADEVE 225
Query: 277 -LRDRLSTIEGNFKLQNDVIRTECENLFSENERLKSQIE---------TYKASQASSNVT 426
LR +++ ++ Q + + +C +L + RL+S++E T A Q V
Sbjct: 226 ELRRKMAQKISEYEEQLEALLNKCSSLEKQKSRLQSEVEVLIMDLEKATRHAQQLEKRVA 285
Query: 427 ----------NKVEDIVDSPVHQDHQYKIRY-----LQHEVTKLLDEKTNIENENQTLIN 561
NK+E++ + +++ LQHE KL D++ + EN+ L +
Sbjct: 286 QLEKINLDLKNKLEEVTMLMEQAQKELRVKIAELQKLQHEYEKLRDQRDQLARENKKLTD 345
Query: 562 DIKTLRESENELVNRINSLLNEKTKLTNKHAMVEKEIDFLNLNHSKEIEDQISNHNAQIE 741
D+ + N+ RI+ E+EI+ L + + D++S + E
Sbjct: 346 DLAEAKSQLNDAHRRIH----------------EQEIEIKRLENER---DELSAAYKEAE 386
Query: 742 TLKNEFDA 765
TL+ + +A
Sbjct: 387 TLRKQEEA 394
Score = 40.4 bits (93), Expect = 0.006
Identities = 47/241 (19%), Positives = 103/241 (42%), Gaps = 8/241 (3%)
Frame = +1
Query: 76 QRFQDQLISLKESKYKTEEKCEYLLRNLSQFEAKCSLLERELSKANDLK-NRFKSAKDMD 252
Q QDQL L+++K K++++ + +F+A+ L +L AN K K+ + ++
Sbjct: 39 QEMQDQLDQLQKAKNKSDKEKQ-------KFQAEVFELLAQLETANKEKLTALKNVEKLE 91
Query: 253 ILMNENQILRDRLSTIEGNFKLQNDVIRTECENLFSENERLKSQIETYKASQASSNVTNK 432
++E I + ++ + E L E +K Q++ A+ + + +
Sbjct: 92 YTVHELNIKIEEINRTVIELTSHKQRLSQENTELIKEVHEVKLQLDN--ANHLKTQIAQQ 149
Query: 433 VEDIVDSPVHQDHQYKIRYLQHEVTKLLDEKTNIENENQTLINDIKTLRESENELVNRIN 612
+ED +H + + ++ ++EN TL ++++L+ +E
Sbjct: 150 LEDT----------------RHRLEEEERKRASLENHAHTLEVELESLKVQLDEESEARL 193
Query: 613 SLLNEKTKLTNKHAMVEKEIDFLNLNHSKEIED-------QISNHNAQIETLKNEFDAI* 771
L + TK A + + + H+ E+E+ +IS + Q+E L N+ ++
Sbjct: 194 ELERQLTKANGDAASWKSKYEAELQAHADEVEELRRKMAQKISEYEEQLEALLNKCSSLE 253
Query: 772 K 774
K
Sbjct: 254 K 254
>sp|Q49419|Y328_MYCGE Hypothetical protein MG328
Length = 756
Score = 55.8 bits (133), Expect = 1e-07
Identities = 51/223 (22%), Positives = 101/223 (45%), Gaps = 11/223 (4%)
Frame = +1
Query: 88 DQLISLKESKYKTEEKCEYLLRNLSQFEAKCSLLERELSKANDLKNRFKSAKD----MDI 255
++L +LK+ K ++ + L S + + +LL ++ N+L+N+ +A++ +D+
Sbjct: 324 EELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVLNNQINELQNQLLTAREANQRLDL 383
Query: 256 LMNENQILRDRLSTIEGNFKLQN----DVIRTECENLFSENERLKSQIETYKASQASSNV 423
+ EN L++ L + N D + + E LF ENE ++ + + Q + N+
Sbjct: 384 VEQENDFLKNELKKLHDNTSNDENEKYDDLLNQYELLFDENE---TKFDKLQVKQQALNL 440
Query: 424 TNKVEDIVDSPVHQDHQYKIRYLQHEVTKLLDEKTNIENENQTLINDIKTLRESENELVN 603
D+Q I L+HE LLDE +++ N + E + L
Sbjct: 441 --------------DYQKTISALKHENDVLLDEIEWTRSKDNDFNNTKNSFEEQKKALDE 486
Query: 604 RINSLLNEKTKLTNKHAMVE---KEIDFLNLNHSKEIEDQISN 723
++N L + +L +K A +E +E LN N ++ Q+ +
Sbjct: 487 KLNGLTIQNQQLQDKIAELEEWNEEKSNLNTNQLVNLQQQLKD 529
Score = 42.4 bits (98), Expect = 0.002
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Frame = +1
Query: 187 LERELSKANDLKNRFKSAKD--------MDILMNENQILRDRLSTIEGNFKLQNDVIRTE 342
LE+E+ +DLK R K D L+ EN+ L ++L +D + E
Sbjct: 269 LEQEI---DDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQNKPVAINPLSDEVNEE 325
Query: 343 CENLFSENERLKSQIETYKASQASSNVTNKVEDIVDSPVHQDHQYKIRYLQHEVTKLLDE 522
ENL E L Q++ K SSNV ++ + PV + +I LQ+++ +
Sbjct: 326 LENLKQEKALLSDQLDALK--NKSSNVQQQLALL---PVLNN---QINELQNQLLTAREA 377
Query: 523 KTN---IENENQTLINDIKTLRE-SENELVNRINSLLNEKTKLTNKHAMVEKEIDFLNLN 690
+E EN L N++K L + + N+ + + LLN+ L +++ E + D L
Sbjct: 378 NQRLDLVEQENDFLKNELKKLHDNTSNDENEKYDDLLNQYELLFDEN---ETKFDKL--- 431
Query: 691 HSKEIEDQISNHNAQ--IETLKNEFDAI 768
+++ Q N + Q I LK+E D +
Sbjct: 432 ---QVKQQALNLDYQKTISALKHENDVL 456
Score = 38.1 bits (87), Expect = 0.032
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 15/256 (5%)
Frame = +1
Query: 46 EEQSISSSEFQRFQDQLISLKESKYKTEEKCEYLLRNLSQFEAKCSLLERELSKANDLKN 225
+E + S+ F + S +E K +EK L Q + K + LE N
Sbjct: 458 DEIEWTRSKDNDFNNTKNSFEEQKKALDEKLNGLTIQNQQLQDKIAELEEW--------N 509
Query: 226 RFKSAKDMDILMNENQILRDRLSTIEGNFKLQNDVIRTECENLFSENERLKSQIETYKAS 405
KS + + L+N Q L+D + F + D + T E + NE++ + S
Sbjct: 510 EEKSNLNTNQLVNLQQQLKDS----QNLFNVAQDKLATLEEVNLALNEKINDLEDELSGS 565
Query: 406 QASSNVTNKVEDIVDSPVHQDHQYKIRYLQHEVTKLLDEKTNIENEN-QTLIN------- 561
+ S+N+ K++ D + Q+ K L+ + KL K N NE Q L++
Sbjct: 566 ENSNNLLAKLQ--ADHEILQESYGK---LKTDFEKLKKNKLNDANEQYQDLLSAFEETNS 620
Query: 562 DIKTLRES-------ENELVNRINSLLNEKTKLTNKHAMVEKEIDFLNLNHSKEIEDQIS 720
+++ ++S N+L +INSL N K +L ++ +D L K ++Q+
Sbjct: 621 ELEKAKQSLSASDSENNQLKQQINSLENAKKELQFTPVTSDEHLD--ELETLKIEKEQLF 678
Query: 721 NHNAQIETLKNEFDAI 768
N ++ F+ I
Sbjct: 679 LENQALQNQLQYFNDI 694
Score = 33.5 bits (75), Expect = 0.78
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Frame = +1
Query: 208 ANDLKNRFKSAKDMDILM-----NENQILRDRLSTIEGNFKLQNDVIRTECENLFSENER 372
AN LK R + + +D M ++ +L + T G +L+ VI E +
Sbjct: 92 ANQLKTREEEQQTVDQTMAFQEVDDQSVLTKEIKT--GFQELKPSVITAEDD-------- 141
Query: 373 LKSQIETYKASQASSNVTNKVEDIVDSPVHQDHQYKIRYLQHEVT------KLLDEKTNI 534
K +I+ Q S E++ + P + ++ K +Q T + D+ +I
Sbjct: 142 -KDEIKPEATKQVS------FEELFNQPSEEINETKKPEVQIFSTDKVKEPEQFDDFYSI 194
Query: 535 ENENQTLINDIKTLRESENE----LVNRINSLLNEKTKLTNKHAMVEKEIDFLNLNHSKE 702
EN + + KT++ +N+ +V RI + K+ KE+ N + K+
Sbjct: 195 ENLTKAINPVHKTIQYDQNDDQPFVVKRILKEQHPTKKVDELDDYNNKELLLENADLKKQ 254
Query: 703 IEDQISNHNAQIETLKNEFDAI*KICSQN*RKVIY 807
I+D N+N QI L+ E D + + S+ K ++
Sbjct: 255 IDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLH 289
Score = 32.3 bits (72), Expect = 1.7
Identities = 29/125 (23%), Positives = 64/125 (51%)
Frame = +1
Query: 76 QRFQDQLISLKESKYKTEEKCEYLLRNLSQFEAKCSLLERELSKANDLKNRFKSAKDMDI 255
+++QD L + +E T + E ++LS +++ + L++++ N L+N K + +
Sbjct: 606 EQYQDLLSAFEE----TNSELEKAKQSLSASDSENNQLKQQI---NSLENAKKELQFTPV 658
Query: 256 LMNENQILRDRLSTIEGNFKLQNDVIRTECENLFSENERLKSQIETYKASQASSNVTNKV 435
+E+ D L T+ + E E LF EN+ L++Q++ + + S+N T ++
Sbjct: 659 TSDEHL---DELETL-----------KIEKEQLFLENQALQNQLQYF--NDISANQTEEI 702
Query: 436 EDIVD 450
++ D
Sbjct: 703 KEASD 707
>sp|Q9BMM8|MYSP_SARSC Paramyosin
Length = 876
Score = 55.1 bits (131), Expect = 2e-07
Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 26/248 (10%)
Frame = +1
Query: 100 SLKESKYKTEEKCEYLLRNLSQFEAKCSLLERELSKANDLKNRFKSAKDMDILMNENQI- 276
SL+ + E + E L L + LER+L+KAN +KS + ++ + +++
Sbjct: 252 SLENHAHTLEVELESLKVQLDEESEARLELERQLTKANGDAASWKSKYEAELQAHADEVE 311
Query: 277 -LRDRLSTIEGNFKLQNDVIRTECENLFSENERLKSQIE---------TYKASQASSNVT 426
LR +++ ++ Q + + +C +L + RL+S++E T A Q V
Sbjct: 312 ELRRKMAQKISEYEEQLEALLNKCSSLAKQKSRLQSEVEVLIMDLEKATTHAQQLEKRVA 371
Query: 427 ----------NKVEDIVDSPVHQDHQYK-----IRYLQHEVTKLLDEKTNIENENQTLIN 561
NK+E++ + + ++ LQHE KL D++ + EN+ L +
Sbjct: 372 QLEKLNLDLKNKLEEVTMLMEQAQKEARAKAAELQKLQHEYEKLRDQRDALARENKKLTD 431
Query: 562 DIKTLRESENELVNRINSLLNEKTKLTNKHAMVEKEIDFLNLNHSKEIEDQISNHNAQIE 741
D+ + N+ RI+ E+EI+ L + +E ++S + E
Sbjct: 432 DLAECKSQLNDAHRRIH----------------EQEIEIKRLENERE---ELSAAYKEAE 472
Query: 742 TLKNEFDA 765
TL+ + +A
Sbjct: 473 TLRKQEEA 480
Score = 39.3 bits (90), Expect = 0.014
Identities = 56/271 (20%), Positives = 119/271 (43%), Gaps = 12/271 (4%)
Frame = +1
Query: 76 QRFQDQLISLKESKYKTEEKCEYLLRNLSQFEAKCSLLERELSKANDLK-NRFKSAKDMD 252
Q QDQL ++++K K++++ + +F+A+ L +L AN K K+ + ++
Sbjct: 125 QEMQDQLDQVQKAKNKSDKEKQ-------KFQAEVFELLAQLETANKEKLTAMKTVEKLE 177
Query: 253 ILMNENQILRDRLSTIEGNFKLQNDVIRTECENLFSENERLKSQIETYKASQASSNVTNK 432
++E I + ++ Q + E L E K Q++ A+ + +
Sbjct: 178 YTVHELNIKIEEINRTVIELTSQKTRLSQENTELIKEVHEHKMQLDN--ANHLKQQLAQQ 235
Query: 433 VEDIVDSPVHQDHQYKIRYLQHEVTKLLDEKTNIENENQTLINDIKTLRESENELVNRIN 612
+ED +H + + ++ ++EN TL ++++L+ +E
Sbjct: 236 LEDT----------------KHRLEEEERKRASLENHAHTLEVELESLKVQLDEESEARL 279
Query: 613 SLLNEKTKLTNKHAMVEKEIDFLNLNHSKEIED-------QISNHNAQIETLKNEFDAI* 771
L + TK A + + + H+ E+E+ +IS + Q+E L N+ ++
Sbjct: 280 ELERQLTKANGDAASWKSKYEAELQAHADEVEELRRKMAQKISEYEEQLEALLNKCSSLA 339
Query: 772 KICS--QN*RKVIY*GLMNWEK--THEKEME 852
K S Q+ +V+ +M+ EK TH +++E
Sbjct: 340 KQKSRLQSEVEVL---IMDLEKATTHAQQLE 367
>sp|P93203|MFP1_LYCES MAR binding filament-like protein 1
Length = 697
Score = 53.5 bits (127), Expect = 7e-07
Identities = 57/239 (23%), Positives = 112/239 (46%), Gaps = 20/239 (8%)
Frame = +1
Query: 49 EQSISSSEFQRFQDQLISLKESKYKTEEKCEYLLRNLSQFEAKCSLLERELSKANDLKNR 228
E+++S + + +++L +++ +++ E L LS+ E + L+ RE + L N+
Sbjct: 131 EKAVSDATIESMKNKLKDKEDAFVSMKKQFESEL--LSEREDRNKLIRREGEERQALVNQ 188
Query: 229 FKSAKDMDI-----LMNENQILRDRLSTIEGNFKLQNDVIRTECENLFSENERLKSQIET 393
KSAK I L NE ++ D I+G LQND++ T+ E+ E LK +++
Sbjct: 189 LKSAKTTVISLGQELQNEKKLAEDLKFEIKG---LQNDLMNTK-EDKKKLQEELKEKLDL 244
Query: 394 YKASQASSNVTNKVEDIVDSPVH-QDHQYKIRYLQHEVTKLLDEKTNIENENQTLINDIK 570
+ + +T +I D V + + K+ + EV L D +++ L ++IK
Sbjct: 245 IQVLE--EKITLLTTEIKDKEVSLRSNTSKLAEKESEVNSLSDMYQQSQDQLMNLTSEIK 302
Query: 571 TLRE--------------SENELVNRINSLLNEKTKLTNKHAMVEKEIDFLNLNHSKEI 705
L++ SE+ L ++NSLL E+ + + ++KE N +++
Sbjct: 303 ELKDEIQKRERELELKCVSEDNLNVQLNSLLLERDESKKELHAIQKEYSEFKSNSDEKV 361
>sp|P38853|KEL1_YEAST Kelch repeats protein 1
Length = 1164
Score = 53.1 bits (126), Expect = 9e-07
Identities = 47/216 (21%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Frame = +1
Query: 163 QFEAKCSLLERELSKANDLKNRFKSAKDMDILMNEN-----QILRDRLSTIE--GNFKLQ 321
+ ++KC +LE + D N + + L EN Q +++ ++E N+K +
Sbjct: 834 RLQSKCEILEADNHSLEDKVNELEELVNSKFLDIENLNEVIQFQNEKIKSLELEPNYKEK 893
Query: 322 NDVIRTECENLFSENERLKSQIETYK----------ASQASSNVTNKVEDIVDSPVHQDH 471
+ ++ E ENL ENERLK++ + + +SQ S +++ E+ +S +
Sbjct: 894 LEELQIEHENLSRENERLKNESKQHNEDIINNVANYSSQLGSLISHWKENRANSSFLESS 953
Query: 472 QYKIRYLQHEVTKLLDEKTNIENENQTLINDIKTLRESENELVNRINSLLNEKTKLTNKH 651
I K + E ++ + ++ N+L NR++ LL +LT
Sbjct: 954 SSLISVSDENGEKTVGEPYGDQSRHHRVV---------INKLTNRLDDLLERSQELTISK 1004
Query: 652 AMVEKEIDFLNLNHSKEIEDQISNHNAQIETLKNEF 759
+ E L + HS +D + N +I+ ++N++
Sbjct: 1005 EKLSSEYHALKMEHSSLSQDVLVKEN-EIKKIQNDY 1039
>sp|Q8MUF6|MYSP_BLOTA Paramyosin (Allergen Blo t 11)
Length = 875
Score = 50.4 bits (119), Expect = 6e-06
Identities = 56/263 (21%), Positives = 116/263 (44%), Gaps = 43/263 (16%)
Frame = +1
Query: 100 SLKESKYKTEEKCEYLLRNLSQFEAKCSLLERELSKANDLKNRFKSAKDMDILMNENQI- 276
SL+ + E + E L L + LER+L+KAN +KS + ++ + +++
Sbjct: 252 SLENHAHTLEVELESLKVQLEEESEARLELERQLTKANGDAASWKSKYEAELQAHVDEVE 311
Query: 277 -LRDRLSTIEGNFKLQNDVIRTECENLFSENERLKSQIETY------------------- 396
LR +++ + Q + + +C L + RL+S++E
Sbjct: 312 ELRRKMAQKISEYGEQLEALLNKCSALEKQKARLQSEVEVLIMDLEKATAHAQALEKRVS 371
Query: 397 KASQASSNVTNKVEDI--VDSPVHQDHQYKI---RYLQHEVTKLLDEKTNIENENQTLIN 561
+ + + ++ +K+E++ + +D + KI + LQHE KL D+K + EN+ L +
Sbjct: 372 QLEKINLDLKSKLEEVSMLLEQTQKDLRVKIADLQKLQHEYEKLRDQKEALARENKKLAD 431
Query: 562 DIKTLRESENELVNRINS-------LLNEKTKLTNKHAMVE---KEIDFLNLNHSKEI-- 705
D+ + N+ RI+ L NE+ +L + E K+ + N + E+
Sbjct: 432 DLAEAKSQLNDAHRRIHEQEIEIKRLENEREELAAAYKEAETLRKQEEAKNQRLTAELAQ 491
Query: 706 -----EDQISNHNAQIETLKNEF 759
E +++ +IE L+ ++
Sbjct: 492 TRHDYEKRLAQKEEEIEALRKQY 514
Score = 37.4 bits (85), Expect = 0.054
Identities = 53/247 (21%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Frame = +1
Query: 76 QRFQDQLISLKESKYKTEEKCEYLLRNLSQFEAKCSLLERELSKANDLKNRFKSAKDMDI 255
Q QDQL ++++K K++++ + +F+A+ L ++ AN D
Sbjct: 125 QEMQDQLDQVQKAKNKSDKEKQ-------KFQAEVFELLAQVETANK-----------DK 166
Query: 256 LMNENQILRDRLSTIEGNFKLQNDVIRTECE------NLFSENERLKSQIETYKASQASS 417
L+ + + + + E N K++ ++ RT E L EN L ++ YK S ++
Sbjct: 167 LVAQKTVEKLEYTVHELNIKIE-EINRTVVEVTAHRQRLSQENSELIKEVHEYKISLDNA 225
Query: 418 N-VTNKVEDIVDSPVHQDHQYKIRYLQHEVTKLLDEKTNIENENQTLINDIKTLRESENE 594
N + ++ ++ H+ L+ E K ++++EN TL ++++L+ E
Sbjct: 226 NHLKGQIAQQLEDTRHR--------LEDEERK----RSSLENHAHTLEVELESLKVQLEE 273
Query: 595 LVNRINSLLNEKTKLTNKHAMVEKEIDFLNLNHSKEIED-------QISNHNAQIETLKN 753
L + TK A + + + H E+E+ +IS + Q+E L N
Sbjct: 274 ESEARLELERQLTKANGDAASWKSKYEAELQAHVDEVEELRRKMAQKISEYGEQLEALLN 333
Query: 754 EFDAI*K 774
+ A+ K
Sbjct: 334 KCSALEK 340
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.317 0.131 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,488,318
Number of Sequences: 369166
Number of extensions: 1262604
Number of successful extensions: 6332
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6155
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8486520240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)