Planarian EST Database


Dr_sW_016_C01

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_016_C01
         (847 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9NRA2|S17A5_HUMAN  Sialin (Solute carrier family 17 memb...   209   8e-54
sp|Q8BN82|S17A5_MOUSE  Sialin (Solute carrier family 17 memb...   206   7e-53
sp|Q9MZD1|S17A5_SHEEP  Sialin (Solute carrier family 17 memb...   204   2e-52
sp|Q03567|YLD2_CAEEL  Hypothetical protein C38C10.2 in chrom...   172   8e-43
sp|O61369|PICO_DROAN  Putative inorganic phosphate cotranspo...   170   4e-42
sp|Q9V7S5|PICO_DROME  Putative inorganic phosphate cotranspo...   168   2e-41
sp|P34644|YOQ6_CAEEL  Hypothetical protein ZK512.6 in chromo...   161   2e-39
sp|Q61983|NPT1_MOUSE  Renal sodium-dependent phosphate trans...   145   1e-34
sp|Q62795|NPT1_RAT  Renal sodium-dependent phosphate transpo...   145   2e-34
sp|Q14916|NPT1_HUMAN  Renal sodium-dependent phosphate trans...   144   4e-34
>sp|Q9NRA2|S17A5_HUMAN Sialin (Solute carrier family 17 member 5) (Sodium/sialic acid
           cotransporter) (AST) (Membrane glycoprotein HP59)
          Length = 495

 Score =  209 bits (532), Expect = 8e-54
 Identities = 112/280 (40%), Positives = 161/280 (57%), Gaps = 2/280 (0%)
 Frame = +2

Query: 2   AVKIGGKWFFGIGVXXXXXXXXXXXXAARAGYGWLIALRVLEGAGESITYPAMHTMLGYW 181
           A KIGGK   G G+            AA  G G LI LR LEG GE +T+PAMH M   W
Sbjct: 130 ASKIGGKMLLGFGILGTAVLTLFTPIAADLGVGPLIVLRALEGLGEGVTFPAMHAMWSSW 189

Query: 182 APAMETTFIGGIVYSGSFXXXXXXXXXXXXXXDANVMGGWPSVFYIPGIVGVLWFIIWSF 361
           AP +E + +  I Y+G+                      W  VFY  G +G+ WF++W +
Sbjct: 190 APPLERSKLLSISYAGAQLGTVISLPLSGIIC---YYMNWTYVFYFFGTIGIFWFLLWIW 246

Query: 362 VAYSTPAHHPRISEKEKRFIESSVN--LSAEEKHTNVPWKQIMLSVPVWAISIANFCAMW 535
           +   TP  H RIS  EK +I SS+   LS+++   +VPW  I+ S+P+WAI +A+F   W
Sbjct: 247 LVSDTPQKHKRISHYEKEYILSSLRNQLSSQK---SVPWVPILKSLPLWAIVVAHFSYNW 303

Query: 536 SLYTLLTSLPQFFEYVLGFSISENGYINALPYFLSAITFVLSGKLADIIRSRKWMSTTVT 715
           + YTLLT LP + + +L F++ ENG++++LPY  S +  +LSG+ AD +R++   ST   
Sbjct: 304 TFYTLLTLLPTYMKEILRFNVQENGFLSSLPYLGSWLCMILSGQAADNLRAKWNFSTLCV 363

Query: 716 RKLFNTIGMLVNAIFIVAISFIGCDKVLVVTFLCIAVAVG 835
           R++F+ IGM+  A+F+VA  FIGCD  L V FL I+  +G
Sbjct: 364 RRIFSLIGMIGPAVFLVAAGFIGCDYSLAVAFLTISTTLG 403
>sp|Q8BN82|S17A5_MOUSE Sialin (Solute carrier family 17 member 5) (Sodium/sialic acid
           cotransporter)
          Length = 495

 Score =  206 bits (524), Expect = 7e-53
 Identities = 108/278 (38%), Positives = 156/278 (56%)
 Frame = +2

Query: 2   AVKIGGKWFFGIGVXXXXXXXXXXXXAARAGYGWLIALRVLEGAGESITYPAMHTMLGYW 181
           A ++GGK   G+G+            AA  G   L+ LR LEG GE +T+PAMH M   W
Sbjct: 130 ASRVGGKLLLGLGILGTSVFTLFTPLAADLGVVTLVVLRALEGLGEGVTFPAMHAMWSSW 189

Query: 182 APAMETTFIGGIVYSGSFXXXXXXXXXXXXXXDANVMGGWPSVFYIPGIVGVLWFIIWSF 361
           AP +E + +  I Y+G+                      W  VFY+ GIVG++WFI+W +
Sbjct: 190 APPLERSKLLTISYAGAQLGTVISLPLSGIIC---YYMNWTYVFYLFGIVGIVWFILWMW 246

Query: 362 VAYSTPAHHPRISEKEKRFIESSVNLSAEEKHTNVPWKQIMLSVPVWAISIANFCAMWSL 541
           +   TP  H  IS  EK +I SS+      +   VPW  I+ S+P+WAI +A+F   WS 
Sbjct: 247 IVSDTPETHKTISHYEKEYIVSSLKNQLSSQKV-VPWGSILKSLPLWAIVVAHFSYNWSF 305

Query: 542 YTLLTSLPQFFEYVLGFSISENGYINALPYFLSAITFVLSGKLADIIRSRKWMSTTVTRK 721
           YTLLT LP + + +L F++ ENG+++ALPYF   +  +L G+ AD +R +   ST   R+
Sbjct: 306 YTLLTLLPTYMKEILRFNVQENGFLSALPYFGCWLCMILCGQAADYLRVKWNFSTISVRR 365

Query: 722 LFNTIGMLVNAIFIVAISFIGCDKVLVVTFLCIAVAVG 835
           +F+ +GM+  A+F+VA  FIGCD  L V FL I+  +G
Sbjct: 366 IFSLVGMVGPAVFLVAAGFIGCDYSLAVAFLTISTTLG 403
>sp|Q9MZD1|S17A5_SHEEP Sialin (Solute carrier family 17 member 5) (Sodium/sialic acid
           cotransporter) (Membrane glycoprotein SP55)
          Length = 495

 Score =  204 bits (519), Expect = 2e-52
 Identities = 114/280 (40%), Positives = 160/280 (57%), Gaps = 2/280 (0%)
 Frame = +2

Query: 2   AVKIGGKWFFGIGVXXXXXXXXXXXXAARAGYGWLIALRVLEGAGESITYPAMHTMLGYW 181
           A + GGK   G G+            AA  G G L+ALR LEG GE +TYPAMH M   W
Sbjct: 130 ASRSGGKLLLGFGIFATAIFTLFTPLAADFGVGALVALRALEGLGEGVTYPAMHAMWSSW 189

Query: 182 APAMETTFIGGIVYSGSFXXXXXXXXXXXXXXDANVMGGWPSVFYIPGIVGVLWFIIWSF 361
           AP +E + +  I Y+G+                      W  VFY  GIVG++WFI+W  
Sbjct: 190 APPLERSKLLSISYAGAQLGTVVSLPLSGVIC---YYMNWTYVFYFFGIVGIIWFILWIC 246

Query: 362 VAYSTPAHHPRISEKEKRFIESSVN--LSAEEKHTNVPWKQIMLSVPVWAISIANFCAMW 535
           +   TP  H  I+  EK +I SS+   LS+++   +VPW  ++ S+P+WAI +A+F   W
Sbjct: 247 LVSDTPETHKTITPYEKEYILSSLKNQLSSQK---SVPWIPMLKSLPLWAIVVAHFSYNW 303

Query: 536 SLYTLLTSLPQFFEYVLGFSISENGYINALPYFLSAITFVLSGKLADIIRSRKWMSTTVT 715
           + YTLLT LP + + VL F+I ENG+++A+PY    +  +LSG+ AD +R+R   ST   
Sbjct: 304 TFYTLLTLLPTYMKEVLRFNIQENGFLSAVPYLGCWLCMILSGQAADNLRARWNFSTLWV 363

Query: 716 RKLFNTIGMLVNAIFIVAISFIGCDKVLVVTFLCIAVAVG 835
           R++F+ IGM+  AIF+VA  FIGCD  L V FL I+  +G
Sbjct: 364 RRVFSLIGMIGPAIFLVAAGFIGCDYSLAVAFLTISTTLG 403
>sp|Q03567|YLD2_CAEEL Hypothetical protein C38C10.2 in chromosome III
          Length = 493

 Score =  172 bits (437), Expect = 8e-43
 Identities = 95/281 (33%), Positives = 145/281 (51%), Gaps = 4/281 (1%)
 Frame = +2

Query: 2   AVKIGGKWFFGIGVXXXXXXXXXXXXAARAGYGWLIALRVLEGAGESITYPAMHTMLGYW 181
           A + GGK    + +            AAR     L  LR   G  +  T+PAMHTM   W
Sbjct: 105 ASRYGGKRVVFVTILGSALLTLLNPVAARTSEYALAILRAAIGFLQGATFPAMHTMWSVW 164

Query: 182 APAMETTFIGGIVYSGSFXXXXXXXXXXXXXXDANVMGGWPSVFYIPGIVGVLWFIIWSF 361
            P +E + + G+ Y+G+               +    GGWPS+FYI G+ GVLW  +W +
Sbjct: 165 GPPLELSVLTGVTYAGAQIGNVIVLPLSGFLCEYGFDGGWPSIFYIIGVFGVLWTAVWWY 224

Query: 362 VAYSTPAHHPRISEKEKRFIESSVNLSAEE---KHTNVPWKQIMLSVPVWAISIANFCAM 532
           V+   PA HPRI+ +EK++I ++V  S  +   K  + PW +I+ S  VWA    +F   
Sbjct: 225 VSSDKPATHPRITPEEKQYIVTAVEASMGKDTGKVPSTPWIKILTSPAVWACWAGHFAGD 284

Query: 533 WSLYTLLTSLPQFFEYVLGFSISENGYINALPYFLSAITFVLSGKLADIIRSRKWMSTTV 712
           W  YT+L SLP F + VLG ++S  G + ++PY    +     G LAD +RS+  +ST  
Sbjct: 285 WGAYTMLVSLPSFLKDVLGLNLSSLGAVASIPYIAYFLAINAGGVLADTLRSKGILSTLN 344

Query: 713 TRKLFNTIGMLVNAIFIVAISFIGCDK-VLVVTFLCIAVAV 832
           TR+    + ++   IF+VA  + GC + VLV+ F+   +A+
Sbjct: 345 TRRAAMLVALIGQGIFLVASGYCGCGQDVLVIIFITCGMAI 385
>sp|O61369|PICO_DROAN Putative inorganic phosphate cotransporter
          Length = 483

 Score =  170 bits (431), Expect = 4e-42
 Identities = 95/278 (34%), Positives = 142/278 (51%), Gaps = 1/278 (0%)
 Frame = +2

Query: 2   AVKIGGKWFFGIGVXXXXXXXXXXXXAARAGYGW-LIALRVLEGAGESITYPAMHTMLGY 178
           A K G   F G G+            AAR G  W L A+R ++G GE    P  H ML  
Sbjct: 84  AKKYGSLRFLGYGMLINSVFAFLVPVAAREGGVWGLCAVRFIQGLGEGPIVPCTHAMLAK 143

Query: 179 WAPAMETTFIGGIVYSGSFXXXXXXXXXXXXXXDANVMGGWPSVFYIPGIVGVLWFIIWS 358
           W P  E + +G  VY+G+               +    GGWPS+FY+ GIVG +W I + 
Sbjct: 144 WIPPNERSRMGAAVYAGAQFGTIISMPLSGLLAEYGFDGGWPSIFYVFGIVGTVWSIAFL 203

Query: 359 FVAYSTPAHHPRISEKEKRFIESSVNLSAEEKHTNVPWKQIMLSVPVWAISIANFCAMWS 538
              Y  P+ HP+I E+EK++I  S+  +   K   +P+K I+ S+P +AI  A+    + 
Sbjct: 204 IFVYEDPSTHPKIDEREKKYINESLWGTDVIKSPPIPFKSIVKSLPFYAILFAHMGHNYG 263

Query: 539 LYTLLTSLPQFFEYVLGFSISENGYINALPYFLSAITFVLSGKLADIIRSRKWMSTTVTR 718
             TL+T LP + + VL FS+  NG +++LPY    +  +    +AD + S K  S T TR
Sbjct: 264 YETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLLSMFISVIADWMISSKRFSLTATR 323

Query: 719 KLFNTIGMLVNAIFIVAISFIGCDKVLVVTFLCIAVAV 832
           K+ N+IG     + ++A S+ GCD+ L +  L I V +
Sbjct: 324 KIINSIGQYGPGLALIAASYTGCDRALTLAILTIGVGL 361
>sp|Q9V7S5|PICO_DROME Putative inorganic phosphate cotransporter
          Length = 529

 Score =  168 bits (425), Expect = 2e-41
 Identities = 95/278 (34%), Positives = 141/278 (50%), Gaps = 1/278 (0%)
 Frame = +2

Query: 2   AVKIGGKWFFGIGVXXXXXXXXXXXXAARAGYGW-LIALRVLEGAGESITYPAMHTMLGY 178
           A K G   F G G+            AAR G  W L A+R ++G GE    P  H ML  
Sbjct: 130 AKKYGSLRFLGYGMLINSVFAFLVPVAARGGGVWGLCAVRFIQGLGEGPIVPCTHAMLAK 189

Query: 179 WAPAMETTFIGGIVYSGSFXXXXXXXXXXXXXXDANVMGGWPSVFYIPGIVGVLWFIIWS 358
           W P  E + +G  VY+G+               +    GGWPS+FY+ GIVG +W I + 
Sbjct: 190 WIPPNERSRMGAAVYAGAQFGTIISMPLSGLLAEYGFDGGWPSIFYVFGIVGTVWSIAFL 249

Query: 359 FVAYSTPAHHPRISEKEKRFIESSVNLSAEEKHTNVPWKQIMLSVPVWAISIANFCAMWS 538
              +  P+ HP I E+EK++I  S+  +   K   +P+K I+ S+P +AI  A+    + 
Sbjct: 250 IFVHEDPSSHPTIDEREKKYINDSLWGTDVVKSPPIPFKAIIKSLPFYAILFAHMGHNYG 309

Query: 539 LYTLLTSLPQFFEYVLGFSISENGYINALPYFLSAITFVLSGKLADIIRSRKWMSTTVTR 718
             TL+T LP + + VL FS+  NG +++LPY    +  +    +AD + S K  S T TR
Sbjct: 310 YETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWLFSMFISVVADWMISSKRFSHTATR 369

Query: 719 KLFNTIGMLVNAIFIVAISFIGCDKVLVVTFLCIAVAV 832
           KL N+IG     + ++A S+ GCD+ L +  L I V +
Sbjct: 370 KLINSIGQYGPGVALIAASYTGCDRALTLAILTIGVGL 407
>sp|P34644|YOQ6_CAEEL Hypothetical protein ZK512.6 in chromosome III
          Length = 576

 Score =  161 bits (408), Expect = 2e-39
 Identities = 85/265 (32%), Positives = 140/265 (52%), Gaps = 3/265 (1%)
 Frame = +2

Query: 29  FGIGVXXXXXXXXXXXXAARAGYGWLIA-LRVLEGAGESITYPAMHTMLGYWAPAMETTF 205
           FGIGV              ++ Y  L+A +++ +G  + + YPAMH +  YWAP ME + 
Sbjct: 153 FGIGVGAFLNILLPYGFKVKSDY--LVAFIQITQGLVQGVCYPAMHGVWRYWAPPMERSK 210

Query: 206 IGGIVYSGSFXXXXXXXXXXXXXXDANVMGGWPSVFYIPGIVGVLWFIIWSFVAYSTPAH 385
           +    ++GS+                     W + FY+ G+ GV+W I+W  V +  PA 
Sbjct: 211 LATTAFTGSYAGAVLGLPLSAFLVS---YVSWAAPFYLYGVCGVIWAILWFCVTFEKPAF 267

Query: 386 HPRISEKEKRFIESSVNLSAEEKHT--NVPWKQIMLSVPVWAISIANFCAMWSLYTLLTS 559
           HP IS++EK FIE ++   +    T  ++PWK I+ S PVWAI +ANF   W+ Y LL +
Sbjct: 268 HPTISQEEKIFIEDAIGHVSNTHPTIRSIPWKAIVTSKPVWAIIVANFARSWTFYLLLQN 327

Query: 560 LPQFFEYVLGFSISENGYINALPYFLSAITFVLSGKLADIIRSRKWMSTTVTRKLFNTIG 739
              + +  LG  I+++G + A+P+ +     ++ G+LAD +RS K +STT  RK+FN  G
Sbjct: 328 QLTYMKEALGMKIADSGLLAAIPHLVMGCVVLMGGQLADYLRSNKILSTTAVRKIFNCGG 387

Query: 740 MLVNAIFIVAISFIGCDKVLVVTFL 814
               A F++ +++   D   ++  +
Sbjct: 388 FGGEAAFMLIVAYTTSDTTAIMALI 412
>sp|Q61983|NPT1_MOUSE Renal sodium-dependent phosphate transport protein 1
           (Sodium/phosphate cotransporter 1) (Na(+)/PI
           cotransporter 1) (Renal sodium-phosphate transport
           protein 1) (Renal Na(+)-dependent phosphate
           cotransporter 1) (Solute carrier family 18 member 1)
          Length = 465

 Score =  145 bits (367), Expect = 1e-34
 Identities = 82/248 (33%), Positives = 127/248 (51%)
 Frame = +2

Query: 80  AARAGYGWLIALRVLEGAGESITYPAMHTMLGYWAPAMETTFIGGIVYSGSFXXXXXXXX 259
           AA+ G   +I  RVL+G  +       H +   WAP +E   +  +  SG          
Sbjct: 126 AAQVGAALVIVCRVLQGIAQGTVSTGQHEIWVKWAPPLERGRLTSMTLSGFVMGPFIVLL 185

Query: 260 XXXXXXDANVMGGWPSVFYIPGIVGVLWFIIWSFVAYSTPAHHPRISEKEKRFIESSVNL 439
                 D   + GWP VFYI GIVG +  + W F+ +  P  HP +S  EK +I SS+  
Sbjct: 186 VSGFICD---LLGWPMVFYIFGIVGCVLSLSWFFLFFDDPKDHPYMSSSEKDYIISSLMQ 242

Query: 440 SAEEKHTNVPWKQIMLSVPVWAISIANFCAMWSLYTLLTSLPQFFEYVLGFSISENGYIN 619
            A     ++P K ++ S+P+WAI + +F  +WS   L+T  P F   VL  ++ ENG ++
Sbjct: 243 QASSGRQSLPIKAMLKSLPLWAIILNSFAFIWSNSLLVTYTPTFISTVLHVNVRENGLLS 302

Query: 620 ALPYFLSAITFVLSGKLADIIRSRKWMSTTVTRKLFNTIGMLVNAIFIVAISFIGCDKVL 799
           +LPY L+ I  +L+G+++D   +RK  S    RKLF T+G     IFI+ + ++  +   
Sbjct: 303 SLPYLLAYICGILAGQMSDFFLTRKIFSIVTVRKLFTTLGSFCPVIFIMCLLYLSYNFYS 362

Query: 800 VVTFLCIA 823
            V FL +A
Sbjct: 363 TVIFLTLA 370
>sp|Q62795|NPT1_RAT Renal sodium-dependent phosphate transport protein 1
           (Sodium/phosphate cotransporter 1) (Na(+)/PI
           cotransporter 1) (Renal sodium-phosphate transport
           protein 1) (Renal Na(+)-dependent phosphate
           cotransporter 1) (Solute carrier family 18 member 1)
          Length = 465

 Score =  145 bits (365), Expect = 2e-34
 Identities = 79/248 (31%), Positives = 127/248 (51%)
 Frame = +2

Query: 80  AARAGYGWLIALRVLEGAGESITYPAMHTMLGYWAPAMETTFIGGIVYSGSFXXXXXXXX 259
           AA+ G   +I  RVL+G  +       H +   WAP +E   +  +  SG          
Sbjct: 126 AAQVGAALVIVCRVLQGIAQGAVSTGQHGIWVKWAPPLERGRLTSMTLSGFVMGPFIALL 185

Query: 260 XXXXXXDANVMGGWPSVFYIPGIVGVLWFIIWSFVAYSTPAHHPRISEKEKRFIESSVNL 439
                 D   + GWP VFYI GIVG +  + W  + +  P +HP +S  EK +I SS+  
Sbjct: 186 VSGFICD---LLGWPMVFYIFGIVGCVLSLFWFILLFDDPNNHPYMSSSEKDYITSSLMQ 242

Query: 440 SAEEKHTNVPWKQIMLSVPVWAISIANFCAMWSLYTLLTSLPQFFEYVLGFSISENGYIN 619
                  ++P K ++ S+P+WAI + +F  +WS   L+T  P F    L  ++ ENG ++
Sbjct: 243 QVHSGRQSLPIKAMLKSLPLWAIILNSFAFIWSNNLLVTYTPTFISTTLHVNVRENGLLS 302

Query: 620 ALPYFLSAITFVLSGKLADIIRSRKWMSTTVTRKLFNTIGMLVNAIFIVAISFIGCDKVL 799
           +LPY L+ I  +++G+++D + SRK  S    RKLF T+G+    IF+V + ++  +   
Sbjct: 303 SLPYLLAYICGIVAGQMSDFLLSRKIFSVVAVRKLFTTLGIFCPVIFVVCLLYLSYNFYS 362

Query: 800 VVTFLCIA 823
            V FL +A
Sbjct: 363 TVIFLTLA 370
>sp|Q14916|NPT1_HUMAN Renal sodium-dependent phosphate transport protein 1
           (Sodium/phosphate cotransporter 1) (Na(+)/PI
           cotransporter 1) (Renal sodium-phosphate transport
           protein 1) (Renal Na(+)-dependent phosphate
           cotransporter 1) (Solute carrier family 18 member 1)
           (NA/PI-4)
          Length = 465

 Score =  144 bits (362), Expect = 4e-34
 Identities = 83/253 (32%), Positives = 124/253 (49%)
 Frame = +2

Query: 80  AARAGYGWLIALRVLEGAGESITYPAMHTMLGYWAPAMETTFIGGIVYSGSFXXXXXXXX 259
           AA  G  W++  R ++GA + I   A   +   WAP +E   +  +  SG          
Sbjct: 126 AAGIGVAWVVVCRAVQGAAQGIVATAQFEIYVKWAPPLERGRLTSMSTSGFLLGPFIVLL 185

Query: 260 XXXXXXDANVMGGWPSVFYIPGIVGVLWFIIWSFVAYSTPAHHPRISEKEKRFIESSVNL 439
                 ++    GWP VFYI G  G    ++W  + Y  P  HP IS  EK +I SS+  
Sbjct: 186 VTGVICESL---GWPMVFYIFGACGCAVCLLWFVLFYDDPKDHPCISISEKEYITSSLVQ 242

Query: 440 SAEEKHTNVPWKQIMLSVPVWAISIANFCAMWSLYTLLTSLPQFFEYVLGFSISENGYIN 619
                  ++P K I+ S+PVWAISI +F   WS   +    P F   +L  +I ENG+++
Sbjct: 243 QVSSSRQSLPIKAILKSLPVWAISIGSFTFFWSHNIMTLYTPMFINSMLHVNIKENGFLS 302

Query: 620 ALPYFLSAITFVLSGKLADIIRSRKWMSTTVTRKLFNTIGMLVNAIFIVAISFIGCDKVL 799
           +LPY  + I   L+G+L+D   +R  +S    RKLF   G L+ AIF V + ++      
Sbjct: 303 SLPYLFAWICGNLAGQLSDFFLTRNILSVIAVRKLFTAAGFLLPAIFGVCLPYLSSTFYS 362

Query: 800 VVTFLCIAVAVGT 838
           +V FL +A A G+
Sbjct: 363 IVIFLILAGATGS 375
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,204,849
Number of Sequences: 369166
Number of extensions: 2143736
Number of successful extensions: 6100
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6050
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8293644780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)