Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_B13
(826 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 381 e-105
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 381 e-105
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 381 e-105
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 381 e-105
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 378 e-104
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 375 e-104
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 373 e-103
sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (... 371 e-102
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 371 e-102
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 369 e-102
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 381 bits (979), Expect = e-105
Identities = 201/255 (78%), Positives = 207/255 (81%)
Frame = +3
Query: 6 QANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVG 185
QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IHDIVLVG
Sbjct: 279 QASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVG 338
Query: 186 GSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXX 365
GSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 339 GSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Query: 366 XXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGK 545
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNLLGK
Sbjct: 399 LSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGK 458
Query: 546 FELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERM 725
FEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERM
Sbjct: 459 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERM 518
Query: 726 VAEAEKYKKKMRSKR 770
V EAEKYK + +R
Sbjct: 519 VQEAEKYKAEDEKQR 533
Score = 36.6 bits (83), Expect = 0.086
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +1
Query: 697 DYLKMILKGWSLKLKNTKRR*DQKDRIAAKNSLESYAYQMKAT 825
D +M+ + K ++ K Q+D++++KNSLESYA+ MKAT
Sbjct: 514 DIERMVQEAEKYKAEDEK----QRDKVSSKNSLESYAFNMKAT 552
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 381 bits (979), Expect = e-105
Identities = 201/255 (78%), Positives = 207/255 (81%)
Frame = +3
Query: 6 QANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVG 185
QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IHDIVLVG
Sbjct: 279 QASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVG 338
Query: 186 GSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXX 365
GSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 339 GSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Query: 366 XXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGK 545
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNLLGK
Sbjct: 399 LSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGK 458
Query: 546 FELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERM 725
FEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERM
Sbjct: 459 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERM 518
Query: 726 VAEAEKYKKKMRSKR 770
V EAEKYK + +R
Sbjct: 519 VQEAEKYKAEDEKQR 533
Score = 36.6 bits (83), Expect = 0.086
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +1
Query: 697 DYLKMILKGWSLKLKNTKRR*DQKDRIAAKNSLESYAYQMKAT 825
D +M+ + K ++ K Q+D++++KNSLESYA+ MKAT
Sbjct: 514 DIERMVQEAEKYKAEDEK----QRDKVSSKNSLESYAFNMKAT 552
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 381 bits (979), Expect = e-105
Identities = 201/255 (78%), Positives = 207/255 (81%)
Frame = +3
Query: 6 QANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVG 185
QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IHDIVLVG
Sbjct: 279 QASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVG 338
Query: 186 GSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXX 365
GSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 339 GSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Query: 366 XXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGK 545
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNLLGK
Sbjct: 399 LSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGK 458
Query: 546 FELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERM 725
FEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERM
Sbjct: 459 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERM 518
Query: 726 VAEAEKYKKKMRSKR 770
V EAEKYK + +R
Sbjct: 519 VQEAEKYKAEDEKQR 533
Score = 36.6 bits (83), Expect = 0.086
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +1
Query: 697 DYLKMILKGWSLKLKNTKRR*DQKDRIAAKNSLESYAYQMKAT 825
D +M+ + K ++ K Q+D++++KNSLESYA+ MKAT
Sbjct: 514 DIERMVQEAEKYKAEDEK----QRDKVSSKNSLESYAFNMKAT 552
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 381 bits (979), Expect = e-105
Identities = 201/255 (78%), Positives = 207/255 (81%)
Frame = +3
Query: 6 QANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVG 185
QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IHDIVLVG
Sbjct: 279 QASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVG 338
Query: 186 GSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXX 365
GSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 339 GSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Query: 366 XXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGK 545
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNLLGK
Sbjct: 399 LSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGK 458
Query: 546 FELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERM 725
FEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERM
Sbjct: 459 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERM 518
Query: 726 VAEAEKYKKKMRSKR 770
V EAEKYK + +R
Sbjct: 519 VQEAEKYKAEDEKQR 533
Score = 35.0 bits (79), Expect = 0.25
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +1
Query: 697 DYLKMILKGWSLKLKNTKRR*DQKDRIAAKNSLESYAYQMKAT 825
D +M+ + K ++ K Q+D++++KNSL+SYA+ MKAT
Sbjct: 514 DIERMVQEAEKYKAEDEK----QRDKVSSKNSLKSYAFNMKAT 552
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 378 bits (970), Expect = e-104
Identities = 198/248 (79%), Positives = 204/248 (82%)
Frame = +3
Query: 6 QANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVG 185
QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAK+DK IHDIVLVG
Sbjct: 279 QASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQIHDIVLVG 338
Query: 186 GSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXX 365
GSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 339 GSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Query: 366 XXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGK 545
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNLLGK
Sbjct: 399 LSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGK 458
Query: 546 FELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERM 725
FEL GIPPAPRGVPQIEVTFDIDANGI+NVSAV+K TGKENKITITNDKGRLSK+DIERM
Sbjct: 459 FELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERM 518
Query: 726 VAEAEKYK 749
V EAEKYK
Sbjct: 519 VQEAEKYK 526
Score = 34.3 bits (77), Expect = 0.43
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 763 QKDRIAAKNSLESYAYQMKAT 825
Q+D+++AKN LESYA+ MK+T
Sbjct: 532 QRDKVSAKNGLESYAFNMKST 552
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 375 bits (963), Expect = e-104
Identities = 195/248 (78%), Positives = 203/248 (81%)
Frame = +3
Query: 6 QANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVG 185
QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEK+LRDAK+DK +HDIVLVG
Sbjct: 279 QASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKSLRDAKMDKAQVHDIVLVG 338
Query: 186 GSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXX 365
GSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 339 GSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Query: 366 XXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGK 545
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNLLGK
Sbjct: 399 LSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGK 458
Query: 546 FELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERM 725
FEL GIPPAPRGVPQIEVTFDIDANGI+NVSA +K TGKENKITITNDKGRLSK+DIERM
Sbjct: 459 FELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGKENKITITNDKGRLSKEDIERM 518
Query: 726 VAEAEKYK 749
V EAEKYK
Sbjct: 519 VQEAEKYK 526
Score = 34.7 bits (78), Expect = 0.33
Identities = 13/21 (61%), Positives = 20/21 (95%)
Frame = +1
Query: 763 QKDRIAAKNSLESYAYQMKAT 825
Q+D++++KNSLESYA+ MK+T
Sbjct: 532 QRDKVSSKNSLESYAFNMKST 552
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 373 bits (957), Expect = e-103
Identities = 193/249 (77%), Positives = 207/249 (83%)
Frame = +3
Query: 3 AQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLV 182
+QA+IEIDSL+EGIDFYT+ITRARFEEL ADLFRST++PVEK+LRDAK+DK +HDIVLV
Sbjct: 279 SQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQVHDIVLV 338
Query: 183 GGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXX 362
GGSTRIPK+QKLL DLF+GKELNKSINPDE ILSGDKSEAVQD
Sbjct: 339 GGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVA 398
Query: 363 XXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLG 542
GIETAGGVMTALIKRN YSDNQPGVLIQVYEGERAMTKDNNLLG
Sbjct: 399 PLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLG 458
Query: 543 KFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIER 722
KFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+NKITITNDKGRLSKDDIER
Sbjct: 459 KFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLSKDDIER 518
Query: 723 MVAEAEKYK 749
MV EAEKYK
Sbjct: 519 MVNEAEKYK 527
Score = 34.7 bits (78), Expect = 0.33
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 763 QKDRIAAKNSLESYAYQMKAT 825
QKDRI AKN LESYA+ +K T
Sbjct: 533 QKDRIGAKNGLESYAFNLKQT 553
>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (Hsc 70-4)
Length = 652
Score = 371 bits (953), Expect = e-102
Identities = 193/250 (77%), Positives = 204/250 (81%)
Frame = +3
Query: 6 QANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLVG 185
QA+IEIDSL+EGIDFYTSITRARFEELNADLFRST+EPVEK+LRDAK+DK IHDIVLVG
Sbjct: 279 QASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKSQIHDIVLVG 338
Query: 186 GSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXX 365
GSTRIPK+QKLLQD FNGKELNKSINPDE IL GDKSE VQD
Sbjct: 339 GSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTP 398
Query: 366 XXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGK 545
GIETAGGVMT LIKRN YSDNQPGVLIQV+EGERAMTKDNNLLGK
Sbjct: 399 LSLGIETAGGVMTTLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERAMTKDNNLLGK 458
Query: 546 FELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERM 725
FEL GIPPAPRGVPQIEVTFDIDANGILNVSAVEK T KENKITITNDKGRLSK++IERM
Sbjct: 459 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAVEKSTNKENKITITNDKGRLSKEEIERM 518
Query: 726 VAEAEKYKKK 755
V EAEKY+ +
Sbjct: 519 VNEAEKYRNE 528
Score = 31.2 bits (69), Expect = 3.6
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 763 QKDRIAAKNSLESYAYQMKAT 825
QK+ I AKN+LESY + MK+T
Sbjct: 532 QKETIQAKNALESYCFNMKST 552
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 371 bits (953), Expect = e-102
Identities = 192/256 (75%), Positives = 210/256 (82%)
Frame = +3
Query: 3 AQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLV 182
+QA+IEIDSL+EGIDFYTSITRARFEE+ +DLFR TLEPVEKALRDAK+DK IHD+VLV
Sbjct: 280 SQASIEIDSLFEGIDFYTSITRARFEEMCSDLFRGTLEPVEKALRDAKMDKAQIHDVVLV 339
Query: 183 GGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXX 362
GGSTRIPK+QKLLQD FNG+ELNKSINPDE ILSGDKSE VQD
Sbjct: 340 GGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAIQAAILSGDKSENVQDLLLLDVA 399
Query: 363 XXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLG 542
GIETAGGVMTALIKRN YSDNQPGV+IQVYEGERAMTKDNNLLG
Sbjct: 400 PLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQPGVMIQVYEGERAMTKDNNLLG 459
Query: 543 KFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIER 722
KFEL+GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIER
Sbjct: 460 KFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIER 519
Query: 723 MVAEAEKYKKKMRSKR 770
MV +A+KYK + ++R
Sbjct: 520 MVQDADKYKAEDDAQR 535
Score = 34.3 bits (77), Expect = 0.43
Identities = 14/21 (66%), Positives = 20/21 (95%)
Frame = +1
Query: 763 QKDRIAAKNSLESYAYQMKAT 825
Q+++IAAKNSLESYA+ MK++
Sbjct: 534 QREKIAAKNSLESYAFNMKSS 554
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 369 bits (947), Expect = e-102
Identities = 191/249 (76%), Positives = 206/249 (82%)
Frame = +3
Query: 3 AQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIVLV 182
+QA+IEIDSL+EGIDFYT+ITRARFEEL ADLFRST++PVEKALRDAK+DK +HDIVLV
Sbjct: 277 SQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKALRDAKMDKAQVHDIVLV 336
Query: 183 GGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXX 362
GGSTRIPK+QKLL D F+GKELNKSINPDE ILSGDKSEAVQD
Sbjct: 337 GGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVA 396
Query: 363 XXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLG 542
GIETAGGVMTALIKRN YSDNQPGVLIQVYEGERA+TKDNNLLG
Sbjct: 397 PLSLGIETAGGVMTALIKRNTTIPTKTSETFTTYSDNQPGVLIQVYEGERALTKDNNLLG 456
Query: 543 KFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIER 722
KFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+NKITITNDKGRLSKD+IER
Sbjct: 457 KFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGRLSKDEIER 516
Query: 723 MVAEAEKYK 749
MV EAEKYK
Sbjct: 517 MVQEAEKYK 525
Score = 37.7 bits (86), Expect = 0.039
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +1
Query: 763 QKDRIAAKNSLESYAYQMKAT 825
QKDRIAAKN+LESYA+ MK T
Sbjct: 531 QKDRIAAKNALESYAFNMKQT 551
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,532,965
Number of Sequences: 369166
Number of extensions: 1308517
Number of successful extensions: 4894
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4274
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7956112725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)