Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_A07-2
(450 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2) 206 2e-53
sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2) 206 2e-53
sp|P05086|EF2_MESAU Elongation factor 2 (EF-2) 206 2e-53
sp|P05197|EF2_RAT Elongation factor 2 (EF-2) 206 2e-53
sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2) 206 3e-53
sp|P13060|EF2_DROME Elongation factor 2 (EF-2) 205 4e-53
sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2) 205 4e-53
sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2) 202 2e-52
sp|O23755|EF2_BETVU Elongation factor 2 (EF-2) 178 4e-45
sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2) 177 1e-44
>sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2)
Length = 858
Score = 206 bits (524), Expect = 2e-53
Identities = 96/139 (69%), Positives = 111/139 (79%)
Frame = +3
Query: 3 QIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGT 182
QIIPTARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGT
Sbjct: 720 QIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGT 779
Query: 183 PQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTR 362
P +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TR
Sbjct: 780 PMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETR 839
Query: 363 KRKGLSEDVPLLDKFLDKL 419
KRKGL E +P LD FLDKL
Sbjct: 840 KRKGLKEGIPALDNFLDKL 858
>sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2)
Length = 858
Score = 206 bits (524), Expect = 2e-53
Identities = 96/139 (69%), Positives = 111/139 (79%)
Frame = +3
Query: 3 QIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGT 182
QIIPTARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGT
Sbjct: 720 QIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGT 779
Query: 183 PQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTR 362
P +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TR
Sbjct: 780 PMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETR 839
Query: 363 KRKGLSEDVPLLDKFLDKL 419
KRKGL E +P LD FLDKL
Sbjct: 840 KRKGLKEGIPALDNFLDKL 858
>sp|P05086|EF2_MESAU Elongation factor 2 (EF-2)
Length = 858
Score = 206 bits (524), Expect = 2e-53
Identities = 96/139 (69%), Positives = 111/139 (79%)
Frame = +3
Query: 3 QIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGT 182
QIIPTARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGT
Sbjct: 720 QIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGT 779
Query: 183 PQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTR 362
P +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TR
Sbjct: 780 PMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETR 839
Query: 363 KRKGLSEDVPLLDKFLDKL 419
KRKGL E +P LD FLDKL
Sbjct: 840 KRKGLKEGIPALDNFLDKL 858
>sp|P05197|EF2_RAT Elongation factor 2 (EF-2)
Length = 858
Score = 206 bits (524), Expect = 2e-53
Identities = 96/139 (69%), Positives = 111/139 (79%)
Frame = +3
Query: 3 QIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGT 182
QIIPTARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGT
Sbjct: 720 QIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGT 779
Query: 183 PQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTR 362
P +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TR
Sbjct: 780 PMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETR 839
Query: 363 KRKGLSEDVPLLDKFLDKL 419
KRKGL E +P LD FLDKL
Sbjct: 840 KRKGLKEGIPALDNFLDKL 858
>sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2)
Length = 852
Score = 206 bits (523), Expect = 3e-53
Identities = 99/139 (71%), Positives = 112/139 (80%)
Frame = +3
Query: 3 QIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGT 182
QIIPTARR FYASVLTA P LLEPVY EIQ PE A+GGIY LN+RRG +F E QV GT
Sbjct: 714 QIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGT 773
Query: 183 PQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTR 362
P +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+PL+ +KP V DTR
Sbjct: 774 PMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTR 833
Query: 363 KRKGLSEDVPLLDKFLDKL 419
KRKGL E VP LD +LDK+
Sbjct: 834 KRKGLKEGVPALDNYLDKM 852
>sp|P13060|EF2_DROME Elongation factor 2 (EF-2)
Length = 844
Score = 205 bits (521), Expect = 4e-53
Identities = 95/139 (68%), Positives = 112/139 (80%)
Frame = +3
Query: 3 QIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGT 182
QIIPT RRC YA+ +TA P L+EPVY CEIQ PE A+GGIY LN+RRG +F E QV GT
Sbjct: 706 QIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGT 765
Query: 183 PQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTR 362
P +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P +P SKP V+DTR
Sbjct: 766 PMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTR 825
Query: 363 KRKGLSEDVPLLDKFLDKL 419
KRKGL E +P L ++LDKL
Sbjct: 826 KRKGLKEGLPDLSQYLDKL 844
>sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2)
Length = 858
Score = 205 bits (521), Expect = 4e-53
Identities = 95/139 (68%), Positives = 110/139 (79%)
Frame = +3
Query: 3 QIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGT 182
QIIPTARRC YA VLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGT
Sbjct: 720 QIIPTARRCLYACVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGT 779
Query: 183 PQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTR 362
P +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TR
Sbjct: 780 PMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDSASRPSQVVAETR 839
Query: 363 KRKGLSEDVPLLDKFLDKL 419
KRKGL E +P LD FLDKL
Sbjct: 840 KRKGLKEGIPALDNFLDKL 858
>sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2)
Length = 858
Score = 202 bits (515), Expect = 2e-52
Identities = 95/139 (68%), Positives = 110/139 (79%)
Frame = +3
Query: 3 QIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGT 182
QIIPTARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGT
Sbjct: 720 QIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGT 779
Query: 183 PQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTR 362
P +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+ V +TR
Sbjct: 780 PMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRGSQVVAETR 839
Query: 363 KRKGLSEDVPLLDKFLDKL 419
KRKGL E +P LD FLDKL
Sbjct: 840 KRKGLKEGIPALDNFLDKL 858
>sp|O23755|EF2_BETVU Elongation factor 2 (EF-2)
Length = 843
Score = 178 bits (452), Expect = 4e-45
Identities = 90/139 (64%), Positives = 102/139 (73%)
Frame = +3
Query: 3 QIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGT 182
QIIPTARR FYAS LTA P LLEPVY EIQ PE ALGGIYS LN++RG +F EMQ GT
Sbjct: 705 QIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGT 764
Query: 183 PQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTR 362
P Y +KAYLPV ESF F+S LRA T GQAFPQCVFDHW++ P +PL+ S+ V R
Sbjct: 765 PLYNIKAYLPVVESFGFSSTLRASTSGQAFPQCVFDHWEMMPSDPLEAGSQASTLVSVIR 824
Query: 363 KRKGLSEDVPLLDKFLDKL 419
KRKGL E + L +F DKL
Sbjct: 825 KRKGLKEQMTPLSEFEDKL 843
>sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2)
Length = 842
Score = 177 bits (449), Expect = 1e-44
Identities = 89/139 (64%), Positives = 101/139 (72%)
Frame = +3
Query: 3 QIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGT 182
QIIPTARR YAS L ASP + EPV+ EIQ E A+GGIYS LNK+RG +FSE Q GT
Sbjct: 704 QIIPTARRVVYASTLLASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGT 763
Query: 183 PQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTR 362
P Y +KAYLPVNESF FT ELR T GQAFPQ VFDHW G+PLDP SKPG V + R
Sbjct: 764 PLYNIKAYLPVNESFGFTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEAR 823
Query: 363 KRKGLSEDVPLLDKFLDKL 419
KRKGL E+VP ++ D+L
Sbjct: 824 KRKGLKENVPDYTEYYDRL 842
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,208,951
Number of Sequences: 369166
Number of extensions: 1130657
Number of successful extensions: 2549
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2438
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2444192520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)