Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_A06
(837 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O61998|HSP90_BRUPA Heat shock protein 90 417 e-116
sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86) 407 e-113
sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86) 407 e-113
sp|P11501|HS90A_CHICK Heat shock protein HSP 90-alpha 406 e-113
sp|P07901|HS90A_MOUSE Heat shock protein HSP 90-alpha (HSP ... 405 e-113
sp|Q9GKX7|HS90A_HORSE Heat shock protein HSP 90-alpha (HSP 86) 404 e-112
sp|P46633|HS90A_CRIGR Heat shock protein HSP 90-alpha (HSP 86) 401 e-111
sp|Q90474|HS90A_BRARE Heat shock protein HSP 90-alpha 400 e-111
sp|O57521|HS90B_BRARE Heat shock protein HSP 90-beta 399 e-111
sp|P34058|HS90B_RAT Heat shock protein HSP 90-beta (HSP 84) 397 e-110
>sp|O61998|HSP90_BRUPA Heat shock protein 90
Length = 717
Score = 417 bits (1072), Expect = e-116
Identities = 209/278 (75%), Positives = 236/278 (84%)
Frame = +3
Query: 3 LPLNISREMLQQNKILKVIRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDS 182
LPLNISREMLQQ+KILKVIRKNLVKKC+ELF+EI EDKDN+KKFYEQFSKNIKLGIHEDS
Sbjct: 376 LPLNISREMLQQSKILKVIRKNLVKKCLELFDEIAEDKDNFKKFYEQFSKNIKLGIHEDS 435
Query: 183 VNRNKIAEFLRYYSTSSGDEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTK 362
NR K++EFLR+Y+++S +EM SLKDYVSRMKENQK IY+ITGES++ V SAFVER+ +
Sbjct: 436 TNRKKLSEFLRFYTSASSEEMTSLKDYVSRMKENQKQIYFITGESREAVASSAFVERVKR 495
Query: 363 RGFEVLLMVDPIDEYSVQQLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCK 542
RGFEV+ M DPIDEY VQQLKEYDGKKLV VT LCK
Sbjct: 496 RGFEVIYMTDPIDEYCVQQLKEYDGKKLVSVTKEGLELPESEEEKKKFEEDKVKFENLCK 555
Query: 543 VMKDILDKKVEKVTVSNRLVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKH 722
VMKDIL+KKVEKV VSNRLVSSPCCIVTS+YGWSANMERIMKAQALRDSSTMGYMAAKKH
Sbjct: 556 VMKDILEKKVEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKH 615
Query: 723 LEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSL 836
LEINPDHS++K L+ RV+ADKNDK+VKDLV+LL+ET+L
Sbjct: 616 LEINPDHSVIKALRERVEADKNDKTVKDLVVLLFETAL 653
>sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86)
Length = 732
Score = 407 bits (1045), Expect = e-113
Identities = 203/278 (73%), Positives = 232/278 (83%)
Frame = +3
Query: 3 LPLNISREMLQQNKILKVIRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDS 182
LPLNISREMLQQ+KILKVIRKNLVKKC+ELF E+ EDK+NYKKFYEQFSKNIKLGIHEDS
Sbjct: 394 LPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDS 453
Query: 183 VNRNKIAEFLRYYSTSSGDEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTK 362
NR K++E LRYY+++SGDEM SLKDY +RMKENQK IYYITGE+KD V +SAFVERL K
Sbjct: 454 QNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRK 513
Query: 363 RGFEVLLMVDPIDEYSVQQLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCK 542
G EV+ M++PIDEY VQQLKE++GK LV VT LCK
Sbjct: 514 HGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCK 573
Query: 543 VMKDILDKKVEKVTVSNRLVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKH 722
+MKDIL+KKVEKV VSNRLV+SPCCIVTS YGW+ANMERIMKAQALRD+STMGYMAAKKH
Sbjct: 574 IMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKH 633
Query: 723 LEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSL 836
LEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+L
Sbjct: 634 LEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETAL 671
>sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86)
Length = 733
Score = 407 bits (1045), Expect = e-113
Identities = 203/278 (73%), Positives = 232/278 (83%)
Frame = +3
Query: 3 LPLNISREMLQQNKILKVIRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDS 182
LPLNISREMLQQ+KILKVIRKNLVKKC+ELF E+ EDK+NYKKFYEQFSKNIKLGIHEDS
Sbjct: 395 LPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDS 454
Query: 183 VNRNKIAEFLRYYSTSSGDEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTK 362
NR K++E LRYY+++SGDEM SLKDY +RMKENQK IYYITGE+KD V +SAFVERL K
Sbjct: 455 QNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRK 514
Query: 363 RGFEVLLMVDPIDEYSVQQLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCK 542
G EV+ M++PIDEY VQQLKE++GK LV VT LCK
Sbjct: 515 HGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCK 574
Query: 543 VMKDILDKKVEKVTVSNRLVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKH 722
+MKDIL+KKVEKV VSNRLV+SPCCIVTS YGW+ANMERIMKAQALRD+STMGYMAAKKH
Sbjct: 575 IMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKH 634
Query: 723 LEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSL 836
LEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+L
Sbjct: 635 LEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETAL 672
>sp|P11501|HS90A_CHICK Heat shock protein HSP 90-alpha
Length = 728
Score = 406 bits (1044), Expect = e-113
Identities = 202/278 (72%), Positives = 232/278 (83%)
Frame = +3
Query: 3 LPLNISREMLQQNKILKVIRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDS 182
LPLNISREMLQQ+KILKVIRKNLVKKC+ELF E+ EDK+NYKKFYEQFSKNIKLGIHEDS
Sbjct: 390 LPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDS 449
Query: 183 VNRNKIAEFLRYYSTSSGDEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTK 362
NR K++E LRYY+++SGDEM SLKDY +RMKENQK +YYITGE+KD V +SAFVERL K
Sbjct: 450 QNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHVYYITGETKDQVANSAFVERLRK 509
Query: 363 RGFEVLLMVDPIDEYSVQQLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCK 542
G EV+ M++PIDEY VQQLKE++GK LV VT LCK
Sbjct: 510 HGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKAKFENLCK 569
Query: 543 VMKDILDKKVEKVTVSNRLVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKH 722
+MKDIL+KKVEKV VSNRLV+SPCCIVTS YGW+ANMERIMKAQALRD+STMGYMAAKKH
Sbjct: 570 IMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKH 629
Query: 723 LEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSL 836
LEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+L
Sbjct: 630 LEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETAL 667
>sp|P07901|HS90A_MOUSE Heat shock protein HSP 90-alpha (HSP 86) (Tumor specific
transplantation 86 kDa antigen) (TSTA)
Length = 733
Score = 405 bits (1041), Expect = e-113
Identities = 202/278 (72%), Positives = 232/278 (83%)
Frame = +3
Query: 3 LPLNISREMLQQNKILKVIRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDS 182
LPLNISREMLQQ+KILKVIRKNLVKKC+ELF E+ EDK+NYKKFYEQFSKNIKLGIHEDS
Sbjct: 395 LPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDS 454
Query: 183 VNRNKIAEFLRYYSTSSGDEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTK 362
NR K++E LRYY+++SGDEM SLKDY +RMKENQK IY+ITGE+KD V +SAFVERL K
Sbjct: 455 QNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYFITGETKDQVANSAFVERLRK 514
Query: 363 RGFEVLLMVDPIDEYSVQQLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCK 542
G EV+ M++PIDEY VQQLKE++GK LV VT LCK
Sbjct: 515 HGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCK 574
Query: 543 VMKDILDKKVEKVTVSNRLVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKH 722
+MKDIL+KKVEKV VSNRLV+SPCCIVTS YGW+ANMERIMKAQALRD+STMGYMAAKKH
Sbjct: 575 IMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKH 634
Query: 723 LEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSL 836
LEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+L
Sbjct: 635 LEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETAL 672
>sp|Q9GKX7|HS90A_HORSE Heat shock protein HSP 90-alpha (HSP 86)
Length = 719
Score = 404 bits (1039), Expect = e-112
Identities = 202/278 (72%), Positives = 231/278 (83%)
Frame = +3
Query: 3 LPLNISREMLQQNKILKVIRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDS 182
LPLNISREMLQQ+KILKVIRKNLVKKC+ELF E+ EDK+NYKKFYEQ SKNIKLGIHEDS
Sbjct: 384 LPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQLSKNIKLGIHEDS 443
Query: 183 VNRNKIAEFLRYYSTSSGDEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTK 362
NR K++E LRYY+++SGDEM SLKDY +RMKENQK IYYITGE+KD V +SAFVERL K
Sbjct: 444 QNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRK 503
Query: 363 RGFEVLLMVDPIDEYSVQQLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCK 542
G EV+ M++PIDEY VQQLKE++GK LV VT LCK
Sbjct: 504 HGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCK 563
Query: 543 VMKDILDKKVEKVTVSNRLVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKH 722
+MKDIL+KKVEKV VSNRLV+SPCCIVTS YGW+ANMERIMKAQALRD+STMGYMAAKKH
Sbjct: 564 IMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKH 623
Query: 723 LEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSL 836
LEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+L
Sbjct: 624 LEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETAL 661
>sp|P46633|HS90A_CRIGR Heat shock protein HSP 90-alpha (HSP 86)
Length = 733
Score = 401 bits (1031), Expect = e-111
Identities = 199/278 (71%), Positives = 232/278 (83%)
Frame = +3
Query: 3 LPLNISREMLQQNKILKVIRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDS 182
LPLNISRE+LQQ+KILKVIRKNLV+KC+ELF E+ EDK+NYKKFYEQFSKNIKLGIHEDS
Sbjct: 395 LPLNISREILQQSKILKVIRKNLVRKCLELFHELAEDKENYKKFYEQFSKNIKLGIHEDS 454
Query: 183 VNRNKIAEFLRYYSTSSGDEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTK 362
NR K++E LRYY+++SGDEM SLKDY +RMKENQK IY+ITGE+KD V +SAFVERL K
Sbjct: 455 QNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYFITGETKDQVANSAFVERLRK 514
Query: 363 RGFEVLLMVDPIDEYSVQQLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCK 542
G EV+ M++PIDEY VQQLKE++GK LV VT LCK
Sbjct: 515 HGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCK 574
Query: 543 VMKDILDKKVEKVTVSNRLVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKH 722
+MKDIL+KKVEKV VSNRLV+SPCCIVTS YGW+ANMERI+KAQALRD+STMGYMAAKKH
Sbjct: 575 IMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIIKAQALRDNSTMGYMAAKKH 634
Query: 723 LEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSL 836
LEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+L
Sbjct: 635 LEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETAL 672
>sp|Q90474|HS90A_BRARE Heat shock protein HSP 90-alpha
Length = 726
Score = 400 bits (1027), Expect = e-111
Identities = 198/278 (71%), Positives = 230/278 (82%)
Frame = +3
Query: 3 LPLNISREMLQQNKILKVIRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDS 182
LPLNISREMLQQ+KILKVIRKNLVKKC++LF E+ EDKDNYKK+YEQFSKNIKLGIHEDS
Sbjct: 388 LPLNISREMLQQSKILKVIRKNLVKKCLDLFTELAEDKDNYKKYYEQFSKNIKLGIHEDS 447
Query: 183 VNRNKIAEFLRYYSTSSGDEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTK 362
NR K+++ LRYY+++SGDEM SLKDYVSRMK+ QK IYYITGE+KD V +SAFVERL K
Sbjct: 448 QNRKKLSDLLRYYTSASGDEMVSLKDYVSRMKDTQKHIYYITGETKDQVANSAFVERLRK 507
Query: 363 RGFEVLLMVDPIDEYSVQQLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCK 542
G EV+ M++PIDEY VQQLKEYDGK LV VT LCK
Sbjct: 508 AGLEVIYMIEPIDEYCVQQLKEYDGKNLVSVTKEGLELPEDEEEKKKQDELKAKYENLCK 567
Query: 543 VMKDILDKKVEKVTVSNRLVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKH 722
+MKDILDKK+EKVTVSNRLVSSPCCIVTS YGW+ANMERIMK+QALRD+STMGYM AKKH
Sbjct: 568 IMKDILDKKIEKVTVSNRLVSSPCCIVTSTYGWTANMERIMKSQALRDNSTMGYMTAKKH 627
Query: 723 LEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSL 836
LEINP H I++TL+ + +A+KNDK+VKDLV+LL+ET+L
Sbjct: 628 LEINPAHPIVETLREKAEAEKNDKAVKDLVILLFETAL 665
>sp|O57521|HS90B_BRARE Heat shock protein HSP 90-beta
Length = 725
Score = 399 bits (1024), Expect = e-111
Identities = 200/278 (71%), Positives = 226/278 (81%)
Frame = +3
Query: 3 LPLNISREMLQQNKILKVIRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDS 182
LPLNISREMLQQ+KILKVIRKN+VKKC+ELF E+ EDKDNYKKFY+ FSKN+KLGIHED
Sbjct: 385 LPLNISREMLQQSKILKVIRKNIVKKCLELFAELAEDKDNYKKFYDAFSKNLKLGIHEDC 444
Query: 183 VNRNKIAEFLRYYSTSSGDEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTK 362
NR K++E LRY S+ SGDEM SL +YVSRMKENQK IYYITGESKD V HSAFVER+ K
Sbjct: 445 QNRKKLSELLRYQSSQSGDEMTSLTEYVSRMKENQKSIYYITGESKDQVAHSAFVERVCK 504
Query: 363 RGFEVLLMVDPIDEYSVQQLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCK 542
RGFEVL M +PIDEY VQQLK++DGK LV VT LCK
Sbjct: 505 RGFEVLYMTEPIDEYCVQQLKDFDGKSLVSVTKEGLELPEDEDEKKKMEEDKAKFENLCK 564
Query: 543 VMKDILDKKVEKVTVSNRLVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKH 722
+MK+ILDKKVEKVTVSNRLVSSPCCIVTS YGW+ANMERIMKAQALRD+STMGYM A KH
Sbjct: 565 LMKEILDKKVEKVTVSNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMANKH 624
Query: 723 LEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSL 836
LEINPDH IM+TL+ + +ADKN K+VKDLV+LL+ET+L
Sbjct: 625 LEINPDHPIMETLRQKAEADKNTKAVKDLVILLFETAL 662
>sp|P34058|HS90B_RAT Heat shock protein HSP 90-beta (HSP 84)
Length = 724
Score = 397 bits (1019), Expect = e-110
Identities = 196/278 (70%), Positives = 229/278 (82%)
Frame = +3
Query: 3 LPLNISREMLQQNKILKVIRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDS 182
LPLNISREMLQQ+KILKVIRKN+VKKC+ELF E+ EDK+NYKKFYE FSKN+KLGIHEDS
Sbjct: 386 LPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDS 445
Query: 183 VNRNKIAEFLRYYSTSSGDEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTK 362
NR +++E LRY+++ SGDEM SL +YVSRMKE QK IYYITGESK+ V +SAFVER+ K
Sbjct: 446 TNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRK 505
Query: 363 RGFEVLLMVDPIDEYSVQQLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCK 542
RGFEV+ M +PIDEY VQQLKE+DGK LV VT LCK
Sbjct: 506 RGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKARFENLCK 565
Query: 543 VMKDILDKKVEKVTVSNRLVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKH 722
+MK+ILDKKVEKVT+SNRLVSSPCCIVTS YGW+ANMERIMKAQALRD+STMGYM AKKH
Sbjct: 566 LMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKH 625
Query: 723 LEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSL 836
LEINPDH I++TL+ + +ADKNDK+VKDLV+LL+ET+L
Sbjct: 626 LEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETAL 663
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,420,095
Number of Sequences: 369166
Number of extensions: 1355823
Number of successful extensions: 5045
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4821
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8148988185
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)