Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_O18
(862 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11012|RAL1_ONCVO RAL-1 protein precursor (RAL1 antigen)... 412 e-115
sp|P14211|CRTC_MOUSE Calreticulin precursor (CRP55) (Calreg... 411 e-114
sp|P52193|CRTC1_BOVIN Calreticulin, brain isoform 1 precurs... 410 e-114
sp|P29413|CRTC_DROME Calreticulin precursor (CRP55) (Calreg... 409 e-114
sp|P18418|CRTC_RAT Calreticulin precursor (CRP55) (Calregul... 408 e-114
sp|Q8K3H7|CRTC_CRIGR Calreticulin precursor (CRP55) (Calreg... 408 e-114
sp|P27797|CRTC_HUMAN Calreticulin precursor (CRP55) (Calreg... 408 e-113
sp|P15253|CRTC_RABIT Calreticulin precursor (CRP55) (Calreg... 408 e-113
sp|P27798|CRTC_CAEEL Calreticulin precursor 383 e-106
sp|Q06814|CRTC_SCHMA Calreticulin precursor (SM4 protein) 370 e-102
>sp|P11012|RAL1_ONCVO RAL-1 protein precursor (RAL1 antigen) (41 kDa larval antigen)
Length = 388
Score = 412 bits (1058), Expect = e-115
Identities = 190/283 (67%), Positives = 220/283 (77%)
Frame = +3
Query: 3 EEFLTDSYKTQWVESTYKGADQGKFTWTAGKFYNDAEKDKGIQTSQDAKFYGISTKFDKQ 182
E+F D ++ +W++S +K D GK+ + GKFY DA KDKG++T+QDAKFY I KFDK
Sbjct: 23 EDFSDDDWEKRWIKSKHKD-DFGKWEISHGKFYGDAVKDKGLKTTQDAKFYSIGAKFDKS 81
Query: 183 FSNEGKKLVIQFQVKHEQTIDCGGGYVKLMSSDIDQTKFHGETPYHIMFGPDICGLSTKK 362
FSN+GK LVIQF VKHEQ IDCGGGYVKLM+SD++ HGETPYHIMFGPDICG TKK
Sbjct: 82 FSNKGKSLVIQFSVKHEQDIDCGGGYVKLMASDVNLEDSHGETPYHIMFGPDICGPGTKK 141
Query: 363 VHVIFNYKGQNHLIKKEIRCKDDEFSHVYTLIVSPDNTYEVLIDNEKVESGNLEDDWDFL 542
VHVIF+YK +NH+IKK+IRCKDD F+H+YTLIV+ DNTYEV ID EK ESG LE DWDFL
Sbjct: 142 VHVIFHYKDRNHMIKKDIRCKDDVFTHLYTLIVNSDNTYEVQIDGEKAESGELEADWDFL 201
Query: 543 APKKIKDPNAKKPEDWEDNEKIDDSTDKKPEDWDKPKTIADPKAKKPXXXXXXXXXXXXA 722
PKKIKDP+AKKPEDW++ E IDD DKKPEDWDKP+ I DP AKKP
Sbjct: 202 PPKKIKDPDAKKPEDWDEREFIDDEDDKKPEDWDKPEHIPDPDAKKPEDWDDEMDGEWEP 261
Query: 723 PQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLY 851
P +DNPEYKGEWKPKQ NP YKG WIHPEI+ PDY P+ NLY
Sbjct: 262 PMVDNPEYKGEWKPKQKKNPAYKGKWIHPEIEIPDYTPDDNLY 304
>sp|P14211|CRTC_MOUSE Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
Length = 416
Score = 411 bits (1056), Expect = e-114
Identities = 191/284 (67%), Positives = 225/284 (79%), Gaps = 1/284 (0%)
Frame = +3
Query: 3 EEFLT-DSYKTQWVESTYKGADQGKFTWTAGKFYNDAEKDKGIQTSQDAKFYGISTKFDK 179
E+FL D++ +WVES +K +D GKF ++GKFY D EKDKG+QTSQDA+FY +S KF+
Sbjct: 25 EQFLDGDAWTNRWVESKHK-SDFGKFVLSSGKFYGDLEKDKGLQTSQDARFYALSAKFEP 83
Query: 180 QFSNEGKKLVIQFQVKHEQTIDCGGGYVKLMSSDIDQTKFHGETPYHIMFGPDICGLSTK 359
FSN+G+ LV+QF VKHEQ IDCGGGYVKL S +DQ HG++ Y+IMFGPDICG TK
Sbjct: 84 -FSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPSGLDQKDMHGDSEYNIMFGPDICGPGTK 142
Query: 360 KVHVIFNYKGQNHLIKKEIRCKDDEFSHVYTLIVSPDNTYEVLIDNEKVESGNLEDDWDF 539
KVHVIFNYKG+N LI K+IRCKDDEF+H+YTLIV PDNTYEV IDN +VESG+LEDDWDF
Sbjct: 143 KVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDF 202
Query: 540 LAPKKIKDPNAKKPEDWEDNEKIDDSTDKKPEDWDKPKTIADPKAKKPXXXXXXXXXXXX 719
L PKKIKDP+A KPEDW++ KIDD TD KPEDWDKP+ I DP AKKP
Sbjct: 203 LPPKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWE 262
Query: 720 APQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLY 851
P I NPEYKGEWKP+QIDNP YKG WIHPEIDNP+Y P++N+Y
Sbjct: 263 PPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIY 306
>sp|P52193|CRTC1_BOVIN Calreticulin, brain isoform 1 precursor (CRP55) (Calregulin)
(HACBP)
Length = 417
Score = 410 bits (1053), Expect = e-114
Identities = 190/284 (66%), Positives = 225/284 (79%), Gaps = 1/284 (0%)
Frame = +3
Query: 3 EEFLT-DSYKTQWVESTYKGADQGKFTWTAGKFYNDAEKDKGIQTSQDAKFYGISTKFDK 179
E+FL D + +W+ES +K D GKF ++GKFY D EKDKG+QTSQDA+FY +S +F+
Sbjct: 25 EQFLDGDGWTERWIESKHK-PDFGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEP 83
Query: 180 QFSNEGKKLVIQFQVKHEQTIDCGGGYVKLMSSDIDQTKFHGETPYHIMFGPDICGLSTK 359
FSN+G+ LV+QF VKHEQ IDCGGGYVKL + +DQT HG++ Y+IMFGPDICG TK
Sbjct: 84 -FSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPAGLDQTDMHGDSEYNIMFGPDICGPGTK 142
Query: 360 KVHVIFNYKGQNHLIKKEIRCKDDEFSHVYTLIVSPDNTYEVLIDNEKVESGNLEDDWDF 539
KVHVIFNYKG+N LI K+IRCKDDEF+H+YTLIV P+NTYEV IDN +VESG+LEDDWDF
Sbjct: 143 KVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPNNTYEVKIDNSQVESGSLEDDWDF 202
Query: 540 LAPKKIKDPNAKKPEDWEDNEKIDDSTDKKPEDWDKPKTIADPKAKKPXXXXXXXXXXXX 719
L PKKIKDP+A KPEDW+D KIDD TD KPEDWDKP+ I DP AKKP
Sbjct: 203 LPPKKIKDPDAAKPEDWDDRAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWE 262
Query: 720 APQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLY 851
P I NPEYKGEWKP+QIDNP+YKG WIHPEIDNP+Y P+SN+Y
Sbjct: 263 PPVIQNPEYKGEWKPRQIDNPEYKGIWIHPEIDNPEYSPDSNIY 306
>sp|P29413|CRTC_DROME Calreticulin precursor (CRP55) (Calregulin) (HACBP)
Length = 406
Score = 409 bits (1051), Expect = e-114
Identities = 190/283 (67%), Positives = 213/283 (75%)
Frame = +3
Query: 3 EEFLTDSYKTQWVESTYKGADQGKFTWTAGKFYNDAEKDKGIQTSQDAKFYGISTKFDKQ 182
E F ++++ W+ S + G + GKF T G FYNDAE DKGIQTSQDA+FY S KFD
Sbjct: 25 ENFDNENWEDTWIYSKHPGKEFGKFVLTPGTFYNDAEADKGIQTSQDARFYAASRKFDG- 83
Query: 183 FSNEGKKLVIQFQVKHEQTIDCGGGYVKLMSSDIDQTKFHGETPYHIMFGPDICGLSTKK 362
FSNE K LV+QF VKHEQ IDCGGGYVKL +DQT HGE+PY IMFGPDICG TKK
Sbjct: 84 FSNEDKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDMHGESPYEIMFGPDICGPGTKK 143
Query: 363 VHVIFNYKGQNHLIKKEIRCKDDEFSHVYTLIVSPDNTYEVLIDNEKVESGNLEDDWDFL 542
VHVIF+YKG+NHLI K+IRCKDD ++H YTLIV PDNTYEVLIDNEKVESGNLEDDWDFL
Sbjct: 144 VHVIFSYKGKNHLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNEKVESGNLEDDWDFL 203
Query: 543 APKKIKDPNAKKPEDWEDNEKIDDSTDKKPEDWDKPKTIADPKAKKPXXXXXXXXXXXXA 722
APKKIKDP A KPEDW+D I D DKKPEDWDKP+ I DP A KP
Sbjct: 204 APKKIKDPTATKPEDWDDRATIPDPDDKKPEDWDKPEHIPDPDATKPEDWDDEMDGEWEP 263
Query: 723 PQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLY 851
P IDNPE+KGEW+PKQ+DNP YKG W HPEI NP+Y P+ LY
Sbjct: 264 PMIDNPEFKGEWQPKQLDNPNYKGAWEHPEIANPEYVPDDKLY 306
>sp|P18418|CRTC_RAT Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60) (CALBP)
(Calcium-binding protein 3) (CABP3)
Length = 416
Score = 408 bits (1049), Expect = e-114
Identities = 189/284 (66%), Positives = 224/284 (78%), Gaps = 1/284 (0%)
Frame = +3
Query: 3 EEFLT-DSYKTQWVESTYKGADQGKFTWTAGKFYNDAEKDKGIQTSQDAKFYGISTKFDK 179
E+FL D++ +WVES +K +D GKF ++GKFY D EKDKG+QTSQDA+FY +S +F+
Sbjct: 25 EQFLDGDAWTNRWVESKHK-SDFGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEP 83
Query: 180 QFSNEGKKLVIQFQVKHEQTIDCGGGYVKLMSSDIDQTKFHGETPYHIMFGPDICGLSTK 359
FSN+G+ LV+QF VKHEQ IDCGGGYVKL +DQ HG++ Y+IMFGPDICG TK
Sbjct: 84 -FSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPGGLDQKDMHGDSEYNIMFGPDICGPGTK 142
Query: 360 KVHVIFNYKGQNHLIKKEIRCKDDEFSHVYTLIVSPDNTYEVLIDNEKVESGNLEDDWDF 539
KVHVIFNYKG+N LI K+IRCKDDEF+H+YTLIV PDNTYEV IDN +VESG+LEDDWDF
Sbjct: 143 KVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDF 202
Query: 540 LAPKKIKDPNAKKPEDWEDNEKIDDSTDKKPEDWDKPKTIADPKAKKPXXXXXXXXXXXX 719
L PKKIKDP+A KPEDW++ KIDD TD KPEDWDKP+ I DP AKKP
Sbjct: 203 LPPKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWE 262
Query: 720 APQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLY 851
P I NPEYKGEWKP+QIDNP YKG WIHPEIDNP+Y P++N+Y
Sbjct: 263 PPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIY 306
>sp|Q8K3H7|CRTC_CRIGR Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
Length = 417
Score = 408 bits (1049), Expect = e-114
Identities = 189/284 (66%), Positives = 223/284 (78%), Gaps = 1/284 (0%)
Frame = +3
Query: 3 EEFLT-DSYKTQWVESTYKGADQGKFTWTAGKFYNDAEKDKGIQTSQDAKFYGISTKFDK 179
E+FL D + +WVES +K +D GKF ++GKFY D EKDKG+QTSQDA+FY +S +F+
Sbjct: 25 EQFLDGDDWTNRWVESKHK-SDFGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEP 83
Query: 180 QFSNEGKKLVIQFQVKHEQTIDCGGGYVKLMSSDIDQTKFHGETPYHIMFGPDICGLSTK 359
FSN+G+ LV+QF VKHEQ IDCGGGYVKL +DQ HG++ Y+IMFGPDICG TK
Sbjct: 84 -FSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPGSLDQKDMHGDSEYNIMFGPDICGPGTK 142
Query: 360 KVHVIFNYKGQNHLIKKEIRCKDDEFSHVYTLIVSPDNTYEVLIDNEKVESGNLEDDWDF 539
KVHVIFNYKG+N LI K+IRCKDDEF+H+YTLIV PDNTYEV IDN +VESG+LEDDWDF
Sbjct: 143 KVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDF 202
Query: 540 LAPKKIKDPNAKKPEDWEDNEKIDDSTDKKPEDWDKPKTIADPKAKKPXXXXXXXXXXXX 719
L PKKIKDP+A KPEDW++ KIDD TD KPEDWDKP+ I DP AKKP
Sbjct: 203 LPPKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWE 262
Query: 720 APQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLY 851
P I NPEYKGEWKP+QIDNP YKG WIHPEIDNP+Y P++N+Y
Sbjct: 263 PPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIY 306
>sp|P27797|CRTC_HUMAN Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60) (grp60)
Length = 417
Score = 408 bits (1048), Expect = e-113
Identities = 188/284 (66%), Positives = 224/284 (78%), Gaps = 1/284 (0%)
Frame = +3
Query: 3 EEFLT-DSYKTQWVESTYKGADQGKFTWTAGKFYNDAEKDKGIQTSQDAKFYGISTKFDK 179
E+FL D + ++W+ES +K +D GKF ++GKFY D EKDKG+QTSQDA+FY +S F+
Sbjct: 25 EQFLDGDGWTSRWIESKHK-SDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEP 83
Query: 180 QFSNEGKKLVIQFQVKHEQTIDCGGGYVKLMSSDIDQTKFHGETPYHIMFGPDICGLSTK 359
FSN+G+ LV+QF VKHEQ IDCGGGYVKL + +DQT HG++ Y+IMFGPDICG TK
Sbjct: 84 -FSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTK 142
Query: 360 KVHVIFNYKGQNHLIKKEIRCKDDEFSHVYTLIVSPDNTYEVLIDNEKVESGNLEDDWDF 539
KVHVIFNYKG+N LI K+IRCKDDEF+H+YTLIV PDNTYEV IDN +VESG+LEDDWDF
Sbjct: 143 KVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDF 202
Query: 540 LAPKKIKDPNAKKPEDWEDNEKIDDSTDKKPEDWDKPKTIADPKAKKPXXXXXXXXXXXX 719
L PKKIKDP+A KPEDW++ KIDD TD KPEDWDKP+ I DP AKKP
Sbjct: 203 LPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWE 262
Query: 720 APQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLY 851
P I NPEYKGEWKP+QIDNP YKG WIHPEIDNP+Y P+ ++Y
Sbjct: 263 PPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIY 306
>sp|P15253|CRTC_RABIT Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
Length = 418
Score = 408 bits (1048), Expect = e-113
Identities = 188/284 (66%), Positives = 224/284 (78%), Gaps = 1/284 (0%)
Frame = +3
Query: 3 EEFLT-DSYKTQWVESTYKGADQGKFTWTAGKFYNDAEKDKGIQTSQDAKFYGISTKFDK 179
E+FL D + +W+ES +K +D GKF ++GKFY D EKDKG+QTSQDA+FY +S +F+
Sbjct: 25 EQFLDGDGWTERWIESKHK-SDFGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEP 83
Query: 180 QFSNEGKKLVIQFQVKHEQTIDCGGGYVKLMSSDIDQTKFHGETPYHIMFGPDICGLSTK 359
FSN+G+ LV+QF VKHEQ IDCGGGYVKL + +DQ HG++ Y+IMFGPDICG TK
Sbjct: 84 -FSNKGQPLVVQFTVKHEQNIDCGGGYVKLFPAGLDQKDMHGDSEYNIMFGPDICGPGTK 142
Query: 360 KVHVIFNYKGQNHLIKKEIRCKDDEFSHVYTLIVSPDNTYEVLIDNEKVESGNLEDDWDF 539
KVHVIFNYKG+N LI K+IRCKDDEF+H+YTLIV PDNTYEV IDN +VESG+LEDDWDF
Sbjct: 143 KVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDF 202
Query: 540 LAPKKIKDPNAKKPEDWEDNEKIDDSTDKKPEDWDKPKTIADPKAKKPXXXXXXXXXXXX 719
L PKKIKDP+A KPEDW++ KIDD TD KPEDWDKP+ I DP AKKP
Sbjct: 203 LPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWE 262
Query: 720 APQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLY 851
P I NPEYKGEWKP+QIDNP YKG WIHPEIDNP+Y P++N+Y
Sbjct: 263 PPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIY 306
>sp|P27798|CRTC_CAEEL Calreticulin precursor
Length = 395
Score = 383 bits (983), Expect = e-106
Identities = 178/283 (62%), Positives = 215/283 (75%)
Frame = +3
Query: 3 EEFLTDSYKTQWVESTYKGADQGKFTWTAGKFYNDAEKDKGIQTSQDAKFYGISTKFDKQ 182
EEF S++ +WV+S +K D G F +AGKF++ +D+GIQTSQDAKFY + KFDK
Sbjct: 21 EEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYSRAAKFDKD 79
Query: 183 FSNEGKKLVIQFQVKHEQTIDCGGGYVKLMSSDIDQTKFHGETPYHIMFGPDICGLSTKK 362
FSN+GK LVIQ+ VKHEQ IDCGGGYVK+M +D D FHGETPY++MFGPDICG T++
Sbjct: 80 FSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICG-PTRR 138
Query: 363 VHVIFNYKGQNHLIKKEIRCKDDEFSHVYTLIVSPDNTYEVLIDNEKVESGNLEDDWDFL 542
VHVI NYKG+N LIKKEI CK DE +H+YTLI++ DNTYEV ID E ++G+LE+DWD L
Sbjct: 139 VHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWDLL 198
Query: 543 APKKIKDPNAKKPEDWEDNEKIDDSTDKKPEDWDKPKTIADPKAKKPXXXXXXXXXXXXA 722
KKIKDP+AKKPEDW++ E IDD+ D KPEDW+KP+ I DP AKKP
Sbjct: 199 PAKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWDDEMDGEWEP 258
Query: 723 PQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLY 851
P IDNPEYKGEWKPKQI NP YKG WIHPEI+NP+Y P+ LY
Sbjct: 259 PMIDNPEYKGEWKPKQIKNPAYKGKWIHPEIENPEYTPDDELY 301
>sp|Q06814|CRTC_SCHMA Calreticulin precursor (SM4 protein)
Length = 393
Score = 370 bits (950), Expect = e-102
Identities = 172/283 (60%), Positives = 210/283 (74%)
Frame = +3
Query: 3 EEFLTDSYKTQWVESTYKGADQGKFTWTAGKFYNDAEKDKGIQTSQDAKFYGISTKFDKQ 182
E F +S + WV+STY QG+F AGK D +D G++T+QDA+FYGI+ K +
Sbjct: 23 ETFPNESIEN-WVQSTYNAEKQGEFKVEAGKSPVDPIEDLGLKTTQDARFYGIARKISEP 81
Query: 183 FSNEGKKLVIQFQVKHEQTIDCGGGYVKLMSSDIDQTKFHGETPYHIMFGPDICGLSTKK 362
FSN GK +V+QF VK ++T+ CGG Y+KL+ SDID KFHGE+PY IMFGPDICG++TKK
Sbjct: 82 FSNRGKTMVLQFTVKFDKTVSCGGAYIKLLGSDIDPKKFHGESPYKIMFGPDICGMATKK 141
Query: 363 VHVIFNYKGQNHLIKKEIRCKDDEFSHVYTLIVSPDNTYEVLIDNEKVESGNLEDDWDFL 542
VHVIFNYKG+NHLIKKEI CKDD +H+YTLIV+P+N YEVL+DN KVE G+LEDDWD L
Sbjct: 142 VHVIFNYKGKNHLIKKEIPCKDDLKTHLYTLIVNPNNKYEVLVDNAKVEEGSLEDDWDML 201
Query: 543 APKKIKDPNAKKPEDWEDNEKIDDSTDKKPEDWDKPKTIADPKAKKPXXXXXXXXXXXXA 722
PKKI DPN KKP+DW D + IDD DKKP++WD+PKTI D AKKP
Sbjct: 202 PPKKIDDPNDKKPDDWVDEQFIDDPDDKKPDNWDQPKTIPDMDAKKPDDWDDAMDGEWER 261
Query: 723 PQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLY 851
PQ DNPEYKGEW P++IDNPKYKG W +IDNP+YK + LY
Sbjct: 262 PQKDNPEYKGEWTPRRIDNPKYKGEWKPVQIDNPEYKHDPELY 304
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,102,070
Number of Sequences: 369166
Number of extensions: 2020630
Number of successful extensions: 6990
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6504
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8534739105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)