Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_O12
(319 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase 88 5e-18
sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase 84 1e-16
sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle... 69 3e-12
sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2 (Aldo... 64 8e-11
sp|P07764|ALF_DROME Fructose-bisphosphate aldolase 64 1e-10
sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Bra... 61 7e-10
sp|P54216|ALF1_CAEEL Fructose-bisphosphate aldolase 1 (Aldo... 61 7e-10
sp|P53449|ALDOC_CHICK Fructose-bisphosphate aldolase C (Bra... 59 3e-09
sp|P09117|ALDOC_RAT Fructose-bisphosphate aldolase C (Brain... 58 6e-09
sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A (Mus... 57 1e-08
>sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase
Length = 363
Score = 88.2 bits (217), Expect = 5e-18
Identities = 43/56 (76%), Positives = 47/56 (83%)
Frame = +2
Query: 2 ASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDGNLKTAAGGKSLFVANHAY 169
ASVL WKGKKENV AAQ++LL LA ANGAAAVGKF+GN+ T G KSLFVANHAY
Sbjct: 308 ASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGDKSLFVANHAY 363
>sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase
Length = 363
Score = 83.6 bits (205), Expect = 1e-16
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +2
Query: 2 ASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDGNLKTAAGGKSLFVANHAY 169
AS + AW+GK ENVKA Q + L LA ANGAA++GKF+G LKTAAG KSLFVANHAY
Sbjct: 308 ASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAGQKSLFVANHAY 363
>sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle type
Length = 363
Score = 68.9 bits (167), Expect = 3e-12
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +2
Query: 2 ASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDGNLKTAAGGKSLFVANHAY 169
ASVL+AW GKKEN+KAAQD+L+ A NG A+ G++ AA G+SLFVANHAY
Sbjct: 308 ASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYKPTGTGAAAGESLFVANHAY 363
>sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2 (Aldolase CE-2) (CE2)
Length = 366
Score = 64.3 bits (155), Expect = 8e-11
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +2
Query: 2 ASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDGNLKTAAGGKSLFVANHAY 169
ASVL+AW GK EN+ AAQ LLH + ANG A++GK+ G A +SLFVA H+Y
Sbjct: 311 ASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKYAGEDAAGAAAESLFVAKHSY 366
>sp|P07764|ALF_DROME Fructose-bisphosphate aldolase
Length = 361
Score = 63.9 bits (154), Expect = 1e-10
Identities = 34/56 (60%), Positives = 38/56 (67%)
Frame = +2
Query: 2 ASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDGNLKTAAGGKSLFVANHAY 169
ASVL AW GKKEN+ A Q++LL A ANG AA GK+ AG SLFVANHAY
Sbjct: 307 ASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVAG-SAGAGSGSLFVANHAY 361
>sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 363
Score = 61.2 bits (147), Expect = 7e-10
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +2
Query: 2 ASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDGNLKTAAGGKSLFVANHAY 169
AS L AW+G KEN KAA ++ L A ANG AA GK+ + + G+SL+VANHAY
Sbjct: 308 ASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDGSAGQSLYVANHAY 363
>sp|P54216|ALF1_CAEEL Fructose-bisphosphate aldolase 1 (Aldolase CE-1) (CE1)
Length = 366
Score = 61.2 bits (147), Expect = 7e-10
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 2 ASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDGNLKT-AAGGKSLFVANHAY 169
AS L W GK EN+ AAQ+ LLH A N A+VGK+ G+ AA +SLFVANH+Y
Sbjct: 310 ASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366
>sp|P53449|ALDOC_CHICK Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 137
Score = 58.9 bits (141), Expect = 3e-09
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +2
Query: 2 ASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDGN-LKTAAGGKSLFVANHAY 169
AS L AW+G+++N AA ++ + A NG AA+GK++G+ + A G+SL+VANHAY
Sbjct: 81 ASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137
>sp|P09117|ALDOC_RAT Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 363
Score = 58.2 bits (139), Expect = 6e-09
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +2
Query: 2 ASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDGNLKTAAGGKSLFVANHAY 169
AS L AW+G+++N AA ++ + A NG AA GK++G+ A +SL+VANHAY
Sbjct: 308 ASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGDGGAAAQSLYVANHAY 363
>sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Aldolase
1)
Length = 364
Score = 57.4 bits (137), Expect = 1e-08
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +2
Query: 2 ASVLEAWKGKKENVKAAQDQLLHLASANGAAAVGKFDGNLKT-AAGGKSLFVANHAY 169
AS L+AW GKKEN+KAAQ++ + A AN A GK+ + ++ AA +SLF++NHAY
Sbjct: 308 ASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,495,931
Number of Sequences: 369166
Number of extensions: 663287
Number of successful extensions: 1633
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 68,354,980
effective HSP length: 74
effective length of database: 54,684,590
effective search space used: 1695222290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)