Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_M15
(217 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q63009|ANM1_RAT Protein arginine N-methyltransferase 1 57 1e-08
sp|Q99873|ANM1_HUMAN Protein arginine N-methyltransferase 1... 57 1e-08
sp|Q9JIF0|ANM1_MOUSE Protein arginine N-methyltransferase 1 57 1e-08
sp|Q9NR22|ANM4_HUMAN Protein arginine N-methyltransferase 4... 54 1e-07
sp|Q6PAK3|ANM4_MOUSE Protein arginine N-methyltransferase 4... 54 1e-07
sp|Q9URX7|ANM1_SCHPO Probable protein arginine N-methyltran... 33 0.20
sp|P38074|HMT1_YEAST HNRNP arginine N-methyltransferase (OD... 32 0.59
sp|P48120|RPOC2_CYAPA DNA-directed RNA polymerase beta'' ch... 29 3.8
sp|P54318|LIPR2_RAT Pancreatic lipase-related protein 2 pre... 28 5.0
sp|P33292|PEX5_PICPA Peroxisomal targeting signal receptor ... 28 6.5
>sp|Q63009|ANM1_RAT Protein arginine N-methyltransferase 1
Length = 353
Score = 57.0 bits (136), Expect = 1e-08
Identities = 23/48 (47%), Positives = 36/48 (75%)
Frame = +3
Query: 3 TVNNGEEVTGMFSLKPNARNNRDLDISIDVKFRGKISQMEETFNYRMR 146
TV GEE+ G ++PNA+NNRDLD +ID+ F+G++ ++ + +YRMR
Sbjct: 306 TVKTGEEIFGTIGMRPNAKNNRDLDFTIDLDFKGQLCELSCSTDYRMR 353
>sp|Q99873|ANM1_HUMAN Protein arginine N-methyltransferase 1 (Interferon receptor 1-bound
protein 4)
Length = 361
Score = 57.0 bits (136), Expect = 1e-08
Identities = 23/48 (47%), Positives = 36/48 (75%)
Frame = +3
Query: 3 TVNNGEEVTGMFSLKPNARNNRDLDISIDVKFRGKISQMEETFNYRMR 146
TV GEE+ G ++PNA+NNRDLD +ID+ F+G++ ++ + +YRMR
Sbjct: 314 TVKTGEEIFGTIGMRPNAKNNRDLDFTIDLDFKGQLCELSCSTDYRMR 361
>sp|Q9JIF0|ANM1_MOUSE Protein arginine N-methyltransferase 1
Length = 371
Score = 57.0 bits (136), Expect = 1e-08
Identities = 23/48 (47%), Positives = 36/48 (75%)
Frame = +3
Query: 3 TVNNGEEVTGMFSLKPNARNNRDLDISIDVKFRGKISQMEETFNYRMR 146
TV GEE+ G ++PNA+NNRDLD +ID+ F+G++ ++ + +YRMR
Sbjct: 324 TVKTGEEIFGTIGMRPNAKNNRDLDFTIDLDFKGQLCELSCSTDYRMR 371
>sp|Q9NR22|ANM4_HUMAN Protein arginine N-methyltransferase 4 (Heterogeneous nuclear
ribonucleoprotein methyltransferase-like protein 4)
Length = 334
Score = 53.9 bits (128), Expect = 1e-07
Identities = 22/48 (45%), Positives = 35/48 (72%)
Frame = +3
Query: 3 TVNNGEEVTGMFSLKPNARNNRDLDISIDVKFRGKISQMEETFNYRMR 146
TV GEE+ G S+KPNA+N RDLD ++D+ F+G++ + + +Y+MR
Sbjct: 287 TVRRGEEIYGTISMKPNAKNVRDLDFTVDLDFKGQLCETSVSNDYKMR 334
>sp|Q6PAK3|ANM4_MOUSE Protein arginine N-methyltransferase 4 (Heterogeneous nuclear
ribonucleoprotein methyltransferase-like protein 4)
Length = 394
Score = 53.9 bits (128), Expect = 1e-07
Identities = 22/48 (45%), Positives = 35/48 (72%)
Frame = +3
Query: 3 TVNNGEEVTGMFSLKPNARNNRDLDISIDVKFRGKISQMEETFNYRMR 146
TV GEE+ G S+KPNA+N RDLD ++D+ F+G++ + + +Y+MR
Sbjct: 347 TVRRGEEIYGTISMKPNAKNVRDLDFTVDLDFKGQLCETSVSNDYKMR 394
>sp|Q9URX7|ANM1_SCHPO Probable protein arginine N-methyltransferase
Length = 339
Score = 33.1 bits (74), Expect = 0.20
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 3 TVNNGEEVTGMFSLKPNARNNRDLDISIDVKFRGKISQME---ETFNYRM 143
TV GE + G + KP N+R+LDI I F + E E +YRM
Sbjct: 290 TVKAGEYIRGTITCKPAEGNHRELDIDISYTFNprePNREPVSEDLSYRM 339
>sp|P38074|HMT1_YEAST HNRNP arginine N-methyltransferase (ODP1 protein)
Length = 348
Score = 31.6 bits (70), Expect = 0.59
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 15 GEEVTGMFSLKPNARNNRDLDISIDVKF 98
G+ + G PN +NNRDL+I I KF
Sbjct: 300 GDTIEGELVCSPNEKNNRDLNIKISYKF 327
>sp|P48120|RPOC2_CYAPA DNA-directed RNA polymerase beta'' chain (PEP) (Plastid-encoded RNA
polymerase beta'' subunit) (RNA polymerase beta''
subunit)
Length = 1265
Score = 28.9 bits (63), Expect = 3.8
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -3
Query: 197 LLLNKKFRFKEIFSSNLPHSIVKSLLHLTNFATEFNINGDIKIPIISSIWFQGEHPRYFL 18
L+ NKK R K HS V L+H NF E I I + I +++ F + R+
Sbjct: 645 LIKNKKIRNK--------HSGVVELVHKKNFVIEIIIKPGIVLKIKNNVSFSKKAKRFIQ 696
Query: 17 P 15
P
Sbjct: 697 P 697
>sp|P54318|LIPR2_RAT Pancreatic lipase-related protein 2 precursor (Secretory
glycoprotein GP-3)
Length = 468
Score = 28.5 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +3
Query: 39 SLKPNARNNRDLDISIDVKFRGKISQMEETFNYRM 143
SLKP AR+ RD+D+ I+V G+I +++ +N ++
Sbjct: 394 SLKPEARHVRDIDVDINV---GEIQKVKFLWNNKV 425
>sp|P33292|PEX5_PICPA Peroxisomal targeting signal receptor (Peroxisomal protein PAS8)
(Peroxin-5) (PTS1 receptor)
Length = 576
Score = 28.1 bits (61), Expect = 6.5
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = -3
Query: 188 NKKFRFKEIFSSNLPHSIVKSLLHLTNFATEFNINGDIKIPIISSIWFQGEHPRYFLP 15
N++FR K+ +N P + V++ + TN+A +F G P + Q +HP +P
Sbjct: 101 NQEFRMKDPMVANAPSAQVQTPVQSTNWAQDFQQAG----PEVQHHAQQHQHPILSVP 154
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,391,404
Number of Sequences: 369166
Number of extensions: 413858
Number of successful extensions: 1057
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 68,354,980
effective HSP length: 43
effective length of database: 60,411,375
effective search space used: 1691518500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)