Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_M02
(492 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P31226|SAX_RANCA Saxiphilin precursor (SAX) 65 9e-11
sp|P01267|THYG_BOVIN Thyroglobulin precursor 59 8e-09
sp|O08710|THYG_MOUSE Thyroglobulin precursor 57 2e-08
sp|P06882|THYG_RAT Thyroglobulin precursor 57 2e-08
sp|P01266|THYG_HUMAN Thyroglobulin precursor 55 7e-08
sp|P81439|EQST_ACTEQ Equistatin 52 6e-07
sp|O88322|NID2_MOUSE Nidogen-2 precursor (NID-2) (Entactin-2) 52 1e-06
sp|Q14112|NID2_HUMAN Nidogen-2 precursor (NID-2) (Osteonido... 51 1e-06
sp|Q8BKV0|TICN3_MOUSE Testican-3 precursor (SPARC/osteonect... 45 1e-04
sp|Q9BQ16|TICN3_HUMAN Testican-3 precursor (SPARC/osteonect... 44 2e-04
>sp|P31226|SAX_RANCA Saxiphilin precursor (SAX)
Length = 844
Score = 65.1 bits (157), Expect = 9e-11
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Frame = +3
Query: 18 NNDQCNVGLICDEVCKEDNNAPKCFKRHLDARRLIKSGAMDVTFPFCEDTGMYKPVQCVG 197
+ D N+ I E + + KC K A + + P C++ G Y+P QC G
Sbjct: 87 SKDPYNLKPIIAEPYSSNRDLQKCLKERQQA---LAKKMIGHYIPQCDEKGNYQPQQCHG 143
Query: 198 AA--CWCVDDSGDEIKGYITGIEKSYGKTCN------CAKDKHEY--SQRKIIGRFF-HC 344
+ CWCV+ G++I G T ++ TC C K++ K++GRF C
Sbjct: 144 STGHCWCVNAMGEKISGTNTPPGQTRA-TCERHELPKCLKERQVALGGDEKVLGRFVPQC 202
Query: 345 DHLGNYEKVQCHGSVCY--CADSSGKKIPTSPT 437
D GNYE Q HGS Y C ++ G++I + T
Sbjct: 203 DEKGNYEPQQFHGSTGYSWCVNAIGEEIAGTKT 235
Score = 48.1 bits (113), Expect = 1e-05
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Frame = +3
Query: 285 CAKDKHEYSQRKIIGRFF-HCDHLGNYEKVQCHGSV--CYCADSSGKKI-----PTSPTV 440
C K++ + +K+IG + CD GNY+ QCHGS C+C ++ G+KI P T
Sbjct: 110 CLKERQQALAKKMIGHYIPQCDEKGNYQPQQCHGSTGHCWCVNAMGEKISGTNTPPGQTR 169
Query: 441 HIAERDSL-KC 470
ER L KC
Sbjct: 170 ATCERHELPKC 180
>sp|P01267|THYG_BOVIN Thyroglobulin precursor
Length = 2769
Score = 58.5 bits (140), Expect = 8e-09
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEYSQRKIIG 329
P C G Y+ VQC CWCVD G E+ G + C +K + ++G
Sbjct: 617 PACTAEGSYEEVQCFAGDCWCVDAQGRELAG---SRVRGGRPRCPTECEKQRARMQSLLG 673
Query: 330 R--------FFHCDHLGNYEKVQCHGSVCYCADSSGKKIP 425
C GN+ VQC S CYC D+ G+ IP
Sbjct: 674 SQPAGSSLFVPACTSKGNFLPVQCFNSECYCVDTEGQPIP 713
Score = 50.4 bits (119), Expect = 2e-06
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 13/104 (12%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCV--GAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEYSQRKI 323
P C + G ++ VQC GA+CWCVD G E+ G + G+ C Q+ +
Sbjct: 50 PQCAEDGSFQTVQCGKDGASCWCVDADGREVPG-----SRQPGRPAACLSFCQLQKQQIL 104
Query: 324 IGRFFH---------CDHLGNYEKVQC--HGSVCYCADSSGKKI 422
+ + + C G+Y VQC C+C D+ G ++
Sbjct: 105 LSSYINSTATSYLPQCQDSGDYSPVQCDLRRRQCWCVDAEGMEV 148
Score = 42.7 bits (99), Expect = 5e-04
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCV-GAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEYSQRK 320
P C G Y+ QC G CWCVD G EI G + G+ +CA+D+ S+R+
Sbjct: 317 PSCHPDGEYQAAQCQQGGPCWCVDSRGQEIPG-----TRQRGEPPSCAEDQSCPSERR 369
Score = 41.6 bits (96), Expect = 0.001
Identities = 33/133 (24%), Positives = 46/133 (34%), Gaps = 42/133 (31%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCV--GAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEYSQRKI 323
P C+D+G Y PVQC CWCVD G E+ G + G+ C + ++R +
Sbjct: 118 PQCQDSGDYSPVQCDLRRRQCWCVDAEGMEVYG-----TRQQGRPARCPRSCEIRNRRLL 172
Query: 324 IG----RFFHCDHLGNYEKVQCH------------------------------------G 383
G C G + VQC
Sbjct: 173 HGVGDRSPPQCSPDGAFRPVQCKLVNTTDMMIFDLVHSYSRFPDAFVTFSSFRSRFPEVS 232
Query: 384 SVCYCADSSGKKI 422
CYCADS G+++
Sbjct: 233 GYCYCADSQGREL 245
Score = 39.7 bits (91), Expect = 0.004
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 342 CDHLGNYEKVQCHGSV--CYCADSSGKKIPTSPT 437
CD G +E VQCH + C+C D G+ +PTS T
Sbjct: 1031 CDAFGGWEPVQCHAATGHCWCVDGKGEYVPTSLT 1064
Score = 38.5 bits (88), Expect = 0.009
Identities = 28/120 (23%), Positives = 42/120 (35%), Gaps = 20/120 (16%)
Frame = +3
Query: 84 KCFKRHLDARRLIKS--GAMDVTFPFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGI 257
+C K+ + L+ S + P C G + PVQC + C+CVD G I G
Sbjct: 660 ECEKQRARMQSLLGSQPAGSSLFVPACTSKGNFLPVQCFNSECYCVDTEGQP----IPGT 715
Query: 258 EKSYGKTCNCAKDKHEYSQRKIIGR------------------FFHCDHLGNYEKVQCHG 383
+ G+ C ++R +G C G + VQC G
Sbjct: 716 RSALGEPKKCPSPCQLQAERAFLGTVRTLVSNPSTLPALSSIYIPQCSASGQWSPVQCDG 775
Score = 35.4 bits (80), Expect = 0.073
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYITGIEKSYGK---TCNCAKDKHEYSQ 314
P C+ G ++PVQC A CWCVD G+ + +T + + +C + S
Sbjct: 1029 PQCDAFGGWEPVQCHAATGHCWCVDGKGEYVPTSLTARSRQIPQCPTSCERLRASGLLSS 1088
Query: 315 RKIIGRFFH----------CDHLGNYEKVQCHGSVCYCAD-SSGKKIP 425
K G C G + ++Q + +C D +SG+ +P
Sbjct: 1089 WKQAGVQAEPSPKDLFIPTCLETGEFARLQASEAGTWCVDPASGEGVP 1136
Score = 35.0 bits (79), Expect = 0.095
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 9/105 (8%)
Frame = +3
Query: 138 DVTFPFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCNCAK-----DKH 302
D+ P C +TG + +Q A WCVD + E G+ + C
Sbjct: 1102 DLFIPTCLETGEFARLQASEAGTWCVDPASGE------GVPPGTNSSAQCPSLCEVLQSG 1155
Query: 303 EYSQRKIIGRFFHC-DHLGNYEKVQC---HGSVCYCADSSGKKIP 425
S+R G C G + VQC GS C+C SG+++P
Sbjct: 1156 VPSRRTSPGYSPACRAEDGGFSPVQCDPAQGS-CWCVLGSGEEVP 1199
Score = 33.9 bits (76), Expect = 0.21
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 342 CDHLGNYEKVQCHGSVCYCADSSGKKIPTS 431
C G+YE+VQC C+C D+ G+++ S
Sbjct: 619 CTAEGSYEEVQCFAGDCWCVDAQGRELAGS 648
Score = 33.1 bits (74), Expect = 0.36
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +3
Query: 150 PFCE-DTGMYKPVQCVGA--ACWCVDDSGDEIKG 242
P C + G + PVQC A +CWCV SG+E+ G
Sbjct: 1167 PACRAEDGGFSPVQCDPAQGSCWCVLGSGEEVPG 1200
Score = 31.6 bits (70), Expect = 1.1
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 342 CDHLGNYEKVQCH-GSVCYCADSSGKKIP 425
C G Y+ QC G C+C DS G++IP
Sbjct: 319 CHPDGEYQAAQCQQGGPCWCVDSRGQEIP 347
>sp|O08710|THYG_MOUSE Thyroglobulin precursor
Length = 2766
Score = 57.4 bits (137), Expect = 2e-08
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEY----SQR 317
P C G Y+ +QC CWCVD G E+ G + T C K + + S +
Sbjct: 618 PSCTAGGSYEDIQCYAGECWCVDSRGKELDGSRVRGGRPRCPT-KCEKQRAQMQSLASAQ 676
Query: 318 KIIGRFF--HCDHLGNYEKVQCHGSVCYCADSSGKKIP-TSPTVHIAERDSLKC 470
FF C G + VQC S CYC D+ G+ IP T TV A++ C
Sbjct: 677 PAGSSFFVPTCTREGYFLPVQCFNSECYCVDTEGQVIPGTQSTVGEAKQCPSVC 730
Score = 56.2 bits (134), Expect = 4e-08
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCV--GAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEYSQRKI 323
P C + G ++ VQC G +CWCVD G E+ G + G+ C + QR +
Sbjct: 51 PQCSEDGSFQTVQCQNDGQSCWCVDSDGREVPG-----SRQLGRPTVCLSFCQLHKQRIL 105
Query: 324 IGRFFH---------CDHLGNYEKVQC--HGSVCYCADSSGKKI 422
+G + + C GNY VQC C+C D+ G ++
Sbjct: 106 LGSYINSTDALYLPQCQDSGNYAPVQCDLQRVQCWCVDTEGMEV 149
Score = 42.7 bits (99), Expect = 5e-04
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +3
Query: 129 GAMDVTFPFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEY 308
G D+ P C TG Y Q G WCVD + E T C+ K +
Sbjct: 1100 GPGDLFIPVCLQTGEYVRKQTSGTGTWCVDPASGEGMPVNTNGSAQCPGLCDVLKSR-AL 1158
Query: 309 SQRKIIGRFFHCDHL-GNYEKVQC---HGSVCYCADSSGKKIPTSPTV 440
S++ +G C+ L G + VQC GS C+C SG+++P + V
Sbjct: 1159 SRKVGLGYSPVCEALDGAFSPVQCDLAQGS-CWCVLGSGEEVPGTRVV 1205
Score = 42.0 bits (97), Expect = 8e-04
Identities = 33/133 (24%), Positives = 46/133 (34%), Gaps = 42/133 (31%)
Frame = +3
Query: 150 PFCEDTGMYKPVQC--VGAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEYSQRKI 323
P C+D+G Y PVQC CWCVD G E+ G + G+ C + ++R +
Sbjct: 119 PQCQDSGNYAPVQCDLQRVQCWCVDTEGMEVYG-----TRQQGRPTRCPRSCEIRNRRLL 173
Query: 324 IG----RFFHCDHLGNYEKVQCH------------------------------------G 383
G C G + VQC
Sbjct: 174 HGVGDRSPPQCTADGEFMPVQCKFVNTTDMMIFDLIHNYNRFPDAFVTFSSFRGRFPEVS 233
Query: 384 SVCYCADSSGKKI 422
CYCADS G+++
Sbjct: 234 GYCYCADSQGREL 246
Score = 39.7 bits (91), Expect = 0.004
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 315 RKIIGRFF--HCDHLGNYEKVQCHGSVCYCADSSGKKIPTSPTVHIAERDSLKCD 473
+++ G+FF C G+YE +QC+ C+C DS GK++ S R KC+
Sbjct: 609 KQMPGKFFVPSCTAGGSYEDIQCYAGECWCVDSRGKELDGSRVRGGRPRCPTKCE 663
Score = 38.5 bits (88), Expect = 0.009
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 150 PFCEDTGMYKPVQC-VGAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKH-EYSQRKI 323
P C G Y+ VQC CWCVD G E+ G + G+ +CA D+ +++
Sbjct: 318 PRCHRDGHYQTVQCQTEGMCWCVDAQGREVPG-----TRQQGQPPSCAADQSCALERQQA 372
Query: 324 IGRFF 338
+ RF+
Sbjct: 373 LSRFY 377
Score = 36.6 bits (83), Expect = 0.033
Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 16/129 (12%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYITGIEKSYGK---TCNCAKDKHEYSQ 314
P C G ++PVQC CWCVD G+ I G + + C ++ S
Sbjct: 1030 PQCNMIGGWEPVQCHAGTGQCWCVDGRGEFIPGSLMSRSSQMPQCPTNCELSRASGLISA 1089
Query: 315 RKIIGRFFH----------CDHLGNYEKVQCHGSVCYCAD-SSGKKIPTSPTVHIAERDS 461
K G + C G Y + Q G+ +C D +SG+ +P + T A+
Sbjct: 1090 WKQAGPQRNPGPGDLFIPVCLQTGEYVRKQTSGTGTWCVDPASGEGMPVN-TNGSAQCPG 1148
Query: 462 LKCD*IKNK 488
L CD +K++
Sbjct: 1149 L-CDVLKSR 1156
Score = 31.6 bits (70), Expect = 1.1
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 342 CDHLGNYEKVQCHGS-VCYCADSSGKKIP 425
C G+Y+ VQC +C+C D+ G+++P
Sbjct: 320 CHRDGHYQTVQCQTEGMCWCVDAQGREVP 348
>sp|P06882|THYG_RAT Thyroglobulin precursor
Length = 2768
Score = 57.0 bits (136), Expect = 2e-08
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEYSQRKIIG 329
P C G Y+ +QC CWCV+ G E++G + + + + C +K + + G
Sbjct: 618 PSCTAEGSYEDIQCYAGECWCVNSQGKEVEG--SRVSGGHPR-CPTKCEKQRAQMQNLAG 674
Query: 330 ------RFF--HCDHLGNYEKVQCHGSVCYCADSSGKKIP 425
FF C G + VQC S CYC D+ G+ IP
Sbjct: 675 AQPAGSSFFVPTCTSEGYFLPVQCFNSECYCVDAEGQVIP 714
Score = 55.1 bits (131), Expect = 9e-08
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Frame = +3
Query: 138 DVTFPFCEDTGMYKPVQCV--GAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEYS 311
D P C + G ++ VQC G +CWCVD G E+ G + G+ C +
Sbjct: 47 DEYVPQCSEDGSFQTVQCQNDGQSCWCVDSDGTEVPG-----SRQLGRPTACLSFCQLHK 101
Query: 312 QRKIIGRFFH---------CDHLGNYEKVQC--HGSVCYCADSSGKKI 422
QR ++ + + C GNY VQC C+C D+ G ++
Sbjct: 102 QRILLSSYINSTDALYLPQCQDSGNYAPVQCDLQQVQCWCVDTEGMEV 149
Score = 46.6 bits (109), Expect = 3e-05
Identities = 39/153 (25%), Positives = 56/153 (36%), Gaps = 46/153 (30%)
Frame = +3
Query: 102 LDARRLIKSGAMDVT----FPFCEDTGMYKPVQC--VGAACWCVDDSGDEIKGYITGIEK 263
L +R++ S ++ T P C+D+G Y PVQC CWCVD G E+ G +
Sbjct: 99 LHKQRILLSSYINSTDALYLPQCQDSGNYAPVQCDLQQVQCWCVDTEGMEVYG-----TR 153
Query: 264 SYGKTCNCAKDKHEYSQRKIIG----RFFHCDHLGNYEKVQCH----------------- 380
G+ C + S+R + G CD G + VQC
Sbjct: 154 QQGRPTRCPRSCEIRSRRLLHGVGDKSPPQCDADGEFMPVQCKFVNTTDMMIFDLIHNYN 213
Query: 381 -------------------GSVCYCADSSGKKI 422
CYCADS G+++
Sbjct: 214 RFPDAFVTFSAFRNRFPEVSGYCYCADSQGREL 246
Score = 45.8 bits (107), Expect = 5e-05
Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Frame = +3
Query: 129 GAMDVTFPFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEY 308
G D+ P C TG Y Q G WCVD S E G T S C K
Sbjct: 1100 GPGDLFTPVCLQTGEYVRQQTSGTGAWCVDPSSGE--GVPTNTNSSAQCPGLCDALKSRV 1157
Query: 309 SQRKI-IGRFFHCDHL-GNYEKVQC---HGSVCYCADSSGKKIPTSPTV 440
RK+ +G C+ L G + VQC GS C+C +SG+++P + V
Sbjct: 1158 LSRKVGLGYTPVCEALDGGFSPVQCDLAQGS-CWCVLASGEEVPGTRVV 1205
Score = 42.4 bits (98), Expect = 6e-04
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYI-----------TGIEKSYGKTCNCA 290
P C G ++PVQC CWCVD G+ I G + T E S A
Sbjct: 1030 PQCNTIGGWEPVQCHPGTGQCWCVDGWGELIPGSLMARSSQMPQCPTSCELSRANGLISA 1089
Query: 291 KDKHEYSQRKIIGRFFH--CDHLGNYEKVQCHGSVCYCAD-SSGKKIPTSPTVHIAERDS 461
+ + + G F C G Y + Q G+ +C D SSG+ +PT+ T A+
Sbjct: 1090 WKQAGHQRNPGPGDLFTPVCLQTGEYVRQQTSGTGAWCVDPSSGEGVPTN-TNSSAQCPG 1148
Query: 462 LKCD*IKNK 488
L CD +K++
Sbjct: 1149 L-CDALKSR 1156
Score = 41.2 bits (95), Expect = 0.001
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 150 PFCEDTGMYKPVQC-VGAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEYSQRK 320
P C G Y+ VQC + CWCVD G EI G + G+ CAKD+ S+R+
Sbjct: 318 PSCHRDGHYQTVQCQMERMCWCVDAQGIEIPG-----TRQQGQPLFCAKDQSCASERQ 370
Score = 39.7 bits (91), Expect = 0.004
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 327 GRFF--HCDHLGNYEKVQCHGSVCYCADSSGKKIPTSPTVHIAERDSLKCD 473
GRFF C G+YE +QC+ C+C +S GK++ S R KC+
Sbjct: 613 GRFFVPSCTAEGSYEDIQCYAGECWCVNSQGKEVEGSRVSGGHPRCPTKCE 663
Score = 38.5 bits (88), Expect = 0.009
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 KCFKRHLDARRLIKSGAMDVTF--PFCEDTGMYKPVQCVGAACWCVDDSGDEIKG 242
KC K+ + L + +F P C G + PVQC + C+CVD G I G
Sbjct: 661 KCEKQRAQMQNLAGAQPAGSSFFVPTCTSEGYFLPVQCFNSECYCVDAEGQVIPG 715
Score = 29.6 bits (65), Expect = 4.0
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 342 CDHLGNYEKVQCHGS-VCYCADSSGKKIP 425
C G+Y+ VQC +C+C D+ G +IP
Sbjct: 320 CHRDGHYQTVQCQMERMCWCVDAQGIEIP 348
>sp|P01266|THYG_HUMAN Thyroglobulin precursor
Length = 2768
Score = 55.5 bits (132), Expect = 7e-08
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKD--KHEYSQRKI 323
P C G Y+ VQC CWCV+ G E+ G + G C D K + +
Sbjct: 618 PSCTTEGSYEDVQCFSGECWCVNSWGKELPG-----SRVRGGQPRCPTDCEKQRARMQSL 672
Query: 324 IGR--------FFHCDHLGNYEKVQCHGSVCYCADSSGKKIP 425
+G C G++ VQC S CYC D+ G+ IP
Sbjct: 673 MGSQPAGSTLFVPACTSEGHFLPVQCFNSECYCVDAEGQAIP 714
Score = 45.8 bits (107), Expect = 5e-05
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCV--GAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEYSQRKI 323
P C + G ++ VQC G +CWCV +G E+ G + G+ C Q+ +
Sbjct: 50 PQCAEDGSFQTVQCQNDGRSCWCVGANGSEVLG-----SRQPGRPVACLSFCQLQKQQIL 104
Query: 324 IGRFFH---------CDHLGNYEKVQC--HGSVCYCADSSGKKIPTSPTVHIAERDSLKC 470
+ + + C G+Y VQC C+C D+ G ++ + + +R C
Sbjct: 105 LSGYINSTDTSYLPQCQDSGDYAPVQCDVQQVQCWCVDAEGMEVYGTRQLGRPKRCPRSC 164
Query: 471 D*IKNK 488
+ I+N+
Sbjct: 165 E-IRNR 169
Score = 42.7 bits (99), Expect = 5e-04
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Frame = +3
Query: 102 LDARRLIKSGAMDVT----FPFCEDTGMYKPVQC--VGAACWCVDDSGDEIKGYITGIEK 263
L ++++ SG ++ T P C+D+G Y PVQC CWCVD G E+ G +
Sbjct: 98 LQKQQILLSGYINSTDTSYLPQCQDSGDYAPVQCDVQQVQCWCVDAEGMEVYG-----TR 152
Query: 264 SYGKTCNCAKDKHEYSQRKIIG----RFFHCDHLGNYEKVQC 377
G+ C + ++R + G C G + VQC
Sbjct: 153 QLGRPKRCPRSCEIRNRRLLHGVGDKSPPQCSAEGEFMPVQC 194
Score = 42.4 bits (98), Expect = 6e-04
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +3
Query: 138 DVTFPFCEDTGMYKPVQCVGAACWCVDD-SGDEIKGYITGIEKSYGKTCNCAKDKHEYSQ 314
D+ P C +TG Y +Q GA WCVD SG+E++ + CN K S+
Sbjct: 1102 DLFVPACLETGEYARLQASGAGTWCVDPASGEELRPG-SSSSAQCPSLCNVLK-SGVLSR 1159
Query: 315 RKIIGRFFHC-DHLGNYEKVQC---HGSVCYCADSSGKKIP 425
R G C G + VQC GS C+C SG+++P
Sbjct: 1160 RVSPGYVPACRAEDGGFSPVQCDQAQGS-CWCVMDSGEEVP 1199
Score = 42.0 bits (97), Expect = 8e-04
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Frame = +3
Query: 108 ARRLIKSGAMDVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYITGIEKSYGK-- 275
A L++SG P C+ G ++PVQC CWCVD+ G I G +T +
Sbjct: 1018 ASALLRSGPY---MPQCDAFGSWEPVQCHAGTGHCWCVDEKGGFIPGSLTARSLQIPQCP 1074
Query: 276 -TCNCAKD-------KHEYSQRKIIGRFFH---CDHLGNYEKVQCHGSVCYCAD-SSGKK 419
TC ++ K SQ + C G Y ++Q G+ +C D +SG++
Sbjct: 1075 TTCEKSRTSGLLSSWKQARSQENPSPKDLFVPACLETGEYARLQASGAGTWCVDPASGEE 1134
Query: 420 I 422
+
Sbjct: 1135 L 1135
Score = 39.7 bits (91), Expect = 0.004
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Frame = +3
Query: 150 PFCE-DTGMYKPVQCVGA--ACWCVDDSGDEIKG-YITGIEKSYGKTCNCAKDKHEYSQR 317
P C + G + PVQC A +CWCV DSG+E+ G +TG + + C + ++
Sbjct: 1167 PACRAEDGGFSPVQCDQAQGSCWCVMDSGEEVPGTRVTGGQPA----CESPRCPLPFNAS 1222
Query: 318 KIIGRFFHCDHLGNYEKVQCHGSVCYCADSSGKKIPTSPTV 440
+++G C+ + C S P P +
Sbjct: 1223 EVVGGTILCETISGPTGSAMQQCQLLCRQGSWSVFPPGPLI 1263
Score = 38.9 bits (89), Expect = 0.007
Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 14/92 (15%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCVGAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEYSQRKIIG 329
P C G + PVQC + C+CVD G I G + I K C + R +
Sbjct: 685 PACTSEGHFLPVQCFNSECYCVDAEGQAIPGTRSAIGKPKKCPTPCQLQSEQAFLRTVQA 744
Query: 330 RFFH--------------CDHLGNYEKVQCHG 383
+ C G + +VQC+G
Sbjct: 745 LLSNSSMLPTLSDTYIPQCSTDGQWRQVQCNG 776
Score = 37.4 bits (85), Expect = 0.019
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 150 PFCEDTGMYKPVQC-VGAACWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEYSQRK 320
P C G Y+ VQC CWCVD G E+ G + G+ +CA+ + S+R+
Sbjct: 317 PSCRRNGDYQAVQCQTEGPCWCVDAQGKEMHG-----TRQQGEPPSCAEGQSCASERQ 369
Score = 35.8 bits (81), Expect = 0.056
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 342 CDHLGNYEKVQCHGSVCYCADSSGKKIPTS 431
C G+YE VQC C+C +S GK++P S
Sbjct: 620 CTTEGSYEDVQCFSGECWCVNSWGKELPGS 649
Score = 35.8 bits (81), Expect = 0.056
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 342 CDHLGNYEKVQCHGSV--CYCADSSGKKIPTSPT 437
CD G++E VQCH C+C D G IP S T
Sbjct: 1031 CDAFGSWEPVQCHAGTGHCWCVDEKGGFIPGSLT 1064
Score = 28.5 bits (62), Expect = 8.9
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +3
Query: 204 CWCVDDSGDEIKG 242
CWCVD++G E++G
Sbjct: 898 CWCVDEAGQELEG 910
>sp|P81439|EQST_ACTEQ Equistatin
Length = 199
Score = 52.4 bits (124), Expect = 6e-07
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Frame = +3
Query: 126 SGAMDVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYITGIEKSYGKTCNCAKDK 299
SG + P C++TG ++ QC G+ CWCVD+ G EI G T I S +C++ K
Sbjct: 14 SGLIGAYVPQCKETGEFEEKQCWGSTGYCWCVDEDGKEILG--TKIRGS----PDCSRRK 67
Query: 300 HEYSQRKIIGRFF----------HCDHLGNYEKVQCHGS--VCYCADSSGKKI 422
+ +++ C G++++VQC S CYC D GK++
Sbjct: 68 AALTLCQMMQAIIVNVPGWCGPPSCKADGSFDEVQCCASNGECYCVDKKGKEL 120
Score = 47.0 bits (110), Expect = 2e-05
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCVGA--ACWCVDDSGDEIKGYIT----GIEKSYGKTCNCAKDKHEYS 311
P C+ G + VQC + C+CVD G E++G E+ H S
Sbjct: 90 PSCKADGSFDEVQCCASNGECYCVDKKGKELEGTRQKGRPSCERHLSPCEEARLQAHSNS 149
Query: 312 QRKIIGRFF-HCDHLGNYEKVQCHGSV--CYCADSSGKKIPTS 431
R +G F C G+Y VQC S C+C D G K+P S
Sbjct: 150 LR--VGMFVPQCLEDGSYNPVQCWPSTGYCWCVDEGGVKVPGS 190
Score = 40.8 bits (94), Expect = 0.002
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Frame = +3
Query: 12 CGNNDQCNVGLICDEVCKE-----DNNAPKCFKRHL----DARRLIKSGAMDVTF--PFC 158
C +N +C D+ KE P C +RHL +AR S ++ V P C
Sbjct: 104 CASNGEC---YCVDKKGKELEGTRQKGRPSC-ERHLSPCEEARLQAHSNSLRVGMFVPQC 159
Query: 159 EDTGMYKPVQCVGAA--CWCVDDSGDEIKG 242
+ G Y PVQC + CWCVD+ G ++ G
Sbjct: 160 LEDGSYNPVQCWPSTGYCWCVDEGGVKVPG 189
>sp|O88322|NID2_MOUSE Nidogen-2 precursor (NID-2) (Entactin-2)
Length = 1403
Score = 51.6 bits (122), Expect = 1e-06
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 24/118 (20%)
Frame = +3
Query: 141 VTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYITGIEKSYGKTCNCAKDKHEYSQ 314
+ P C+D G + P+QC G+ CWCVD +G E + G + G T E +Q
Sbjct: 986 IHIPQCDDQGNFVPLQCHGSTGFCWCVDRNGHE----VPGTQTPPGSTPPHCGPPPEPTQ 1041
Query: 315 --RKIIGRFF------------------HCDHLGNYEKVQCHG--SVCYCADSSGKKI 422
R + R+ CD LG++ +QCHG C+C D G+++
Sbjct: 1042 RPRTVCERWRESLLEHYGGTPRDDQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGREL 1099
Score = 40.4 bits (93), Expect = 0.002
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +3
Query: 288 AKDKHEYSQRKIIGRFFHCDHLGNYEKVQCHGSV--CYCADSSGKKIPTSPT 437
A+ +H Y +I CD GN+ +QCHGS C+C D +G ++P + T
Sbjct: 975 AQTQHAYPGSRI--HIPQCDDQGNFVPLQCHGSTGFCWCVDRNGHEVPGTQT 1024
Score = 40.4 bits (93), Expect = 0.002
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 138 DVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKG 242
D P C+D G + P+QC G + CWCVD G E++G
Sbjct: 1065 DQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGRELQG 1101
>sp|Q14112|NID2_HUMAN Nidogen-2 precursor (NID-2) (Osteonidogen)
Length = 1375
Score = 51.2 bits (121), Expect = 1e-06
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 24/134 (17%)
Frame = +3
Query: 93 KRHLDARRLIKSGAMDVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKGYITGIEKS 266
+RH A+ + P C++ G + P+QC G+ CWCVD G E + G +
Sbjct: 944 QRHAQAQYAYPGARFHI--PQCDEQGNFLPLQCHGSTGFCWCVDPDGHE----VPGTQTP 997
Query: 267 YGKTCNCAKDKHEYSQR--KIIGRFF------------------HCDHLGNYEKVQCHG- 383
G T E +QR I R+ CD LG++ +QCHG
Sbjct: 998 PGSTPPHCGPSPEPTQRPPTICERWRENLLEHYGGTPRDDQYVPQCDDLGHFIPLQCHGK 1057
Query: 384 -SVCYCADSSGKKI 422
C+C D G+++
Sbjct: 1058 SDFCWCVDKDGREV 1071
Score = 42.4 bits (98), Expect = 6e-04
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 291 KDKHEYSQRKIIGRFFH---CDHLGNYEKVQCHGSV--CYCADSSGKKIPTSPT 437
+ +H +Q G FH CD GN+ +QCHGS C+C D G ++P + T
Sbjct: 943 QQRHAQAQYAYPGARFHIPQCDEQGNFLPLQCHGSTGFCWCVDPDGHEVPGTQT 996
Score = 40.8 bits (94), Expect = 0.002
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 138 DVTFPFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKG 242
D P C+D G + P+QC G + CWCVD G E++G
Sbjct: 1037 DQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGREVQG 1073
>sp|Q8BKV0|TICN3_MOUSE Testican-3 precursor (SPARC/osteonectin, CWCV, and Kazal-like
domains proteoglycan 3)
Length = 436
Score = 44.7 bits (104), Expect = 1e-04
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +3
Query: 18 NNDQCNVGLICDEVCKEDNNAPKCFKR--HLDARRLIKSGAMDVTFPFCEDTGMYKPVQC 191
NN+ C C + P C ++ R+ IK + P C++ G YKP QC
Sbjct: 302 NNEWC--------YCFQRQQDPPCHTELSNIQKRQGIKK-LLGQYIPLCDEDGYYKPTQC 352
Query: 192 VGAA--CWCVDDSGDEIKG 242
G+ CWCVD G+E+ G
Sbjct: 353 HGSVGQCWCVDRYGNEVVG 371
Score = 37.7 bits (86), Expect = 0.015
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 315 RKIIGRFFH-CDHLGNYEKVQCHGSV--CYCADSSGKKIPTSPTVHIAE 452
+K++G++ CD G Y+ QCHGSV C+C D G ++ S +A+
Sbjct: 331 KKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVVGSRINGVAD 379
>sp|Q9BQ16|TICN3_HUMAN Testican-3 precursor (SPARC/osteonectin, CWCV, and Kazal-like
domains proteoglycan 3)
Length = 436
Score = 44.3 bits (103), Expect = 2e-04
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 150 PFCEDTGMYKPVQCVGAA--CWCVDDSGDEIKG 242
P C++ G YKP QC G+ CWCVD G+E+ G
Sbjct: 339 PLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMG 371
Score = 37.7 bits (86), Expect = 0.015
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 315 RKIIGRFFH-CDHLGNYEKVQCHGSV--CYCADSSGKKIPTSPTVHIAE 452
+K++G++ CD G Y+ QCHGSV C+C D G ++ S +A+
Sbjct: 331 KKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRINGVAD 379
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,649,954
Number of Sequences: 369166
Number of extensions: 1253226
Number of successful extensions: 3523
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3458
length of database: 68,354,980
effective HSP length: 102
effective length of database: 49,512,010
effective search space used: 3020232610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)