Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_M01
(768 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q28259|G3P_CANFA Glyceraldehyde-3-phosphate dehydrogenas... 354 1e-97
sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase ... 354 1e-97
sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenas... 353 3e-97
sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenas... 353 4e-97
sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenas... 350 3e-96
sp|P10096|G3P_BOVIN Glyceraldehyde-3-phosphate dehydrogenas... 348 7e-96
sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenas... 347 2e-95
sp|P16858|G3P_MOUSE Glyceraldehyde-3-phosphate dehydrogenas... 346 3e-95
sp|P04406|G3P2_HUMAN Glyceraldehyde-3-phosphate dehydrogena... 345 6e-95
sp|O57479|G3P_COLLI Glyceraldehyde-3-phosphate dehydrogenas... 345 6e-95
>sp|Q28259|G3P_CANFA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 354 bits (909), Expect = 1e-97
Identities = 175/250 (70%), Positives = 202/250 (80%), Gaps = 4/250 (1%)
Frame = +2
Query: 2 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 181
VG+NGFGRIGRLV RAA G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENG 63
Query: 182 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 361
KLV++G ++S++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGKSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 362 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 541
SADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TAT
Sbjct: 123 SADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITAT 182
Query: 542 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSV-- 715
QKTVDGPS K+WRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSV
Sbjct: 183 QKTVDGPSGKMWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 716 --CRFDLQTK 739
CR + K
Sbjct: 243 LTCRLEKAAK 252
Score = 34.3 bits (77), Expect = 0.38
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +3
Query: 717 VDLTCKLKKAAKYDEIK 767
VDLTC+L+KAAKYD+IK
Sbjct: 241 VDLTCRLEKAAKYDDIK 257
>sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 354 bits (909), Expect = 1e-97
Identities = 176/250 (70%), Positives = 201/250 (80%), Gaps = 4/250 (1%)
Frame = +2
Query: 2 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 181
VG+NGFGRIGRLV RAA G VD+VA+NDPFI+L YMVYMF+YDSTHGKFHG V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAENG 63
Query: 182 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 361
KLV++G A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGKAITIFQERDPANIKWGDAGATYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 362 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 541
SADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TAT
Sbjct: 123 SADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITAT 182
Query: 542 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSV-- 715
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSV
Sbjct: 183 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 716 --CRFDLQTK 739
CR + K
Sbjct: 243 LTCRLEKPAK 252
Score = 32.3 bits (72), Expect = 1.5
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 717 VDLTCKLKKAAKYDEIK 767
VDLTC+L+K AKYD+IK
Sbjct: 241 VDLTCRLEKPAKYDDIK 257
>sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 353 bits (906), Expect = 3e-97
Identities = 175/250 (70%), Positives = 201/250 (80%), Gaps = 4/250 (1%)
Frame = +2
Query: 2 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 181
VG+NGFGRIGRLV RAA G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENG 63
Query: 182 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 361
KLV++G ++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGKPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 362 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 541
SADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TAT
Sbjct: 123 SADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITAT 182
Query: 542 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSV-- 715
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSV
Sbjct: 183 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 716 --CRFDLQTK 739
CR + K
Sbjct: 243 LTCRLEKAAK 252
Score = 34.3 bits (77), Expect = 0.38
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +3
Query: 717 VDLTCKLKKAAKYDEIK 767
VDLTC+L+KAAKYD+IK
Sbjct: 241 VDLTCRLEKAAKYDDIK 257
>sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 353 bits (905), Expect = 4e-97
Identities = 176/250 (70%), Positives = 200/250 (80%), Gaps = 4/250 (1%)
Frame = +2
Query: 2 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 181
VG+NGFGRIGRLV RAA G VDVVA+NDPFI+L YMVYMF+YDSTHGKFHG V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAENG 63
Query: 182 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 361
KLV++G A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 362 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 541
S DAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TAT
Sbjct: 123 SXDAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITAT 182
Query: 542 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSV-- 715
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSV
Sbjct: 183 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 716 --CRFDLQTK 739
CR + K
Sbjct: 243 LTCRLEKAAK 252
Score = 34.3 bits (77), Expect = 0.38
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +3
Query: 717 VDLTCKLKKAAKYDEIK 767
VDLTC+L+KAAKYD+IK
Sbjct: 241 VDLTCRLEKAAKYDDIK 257
>sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 350 bits (897), Expect = 3e-96
Identities = 175/250 (70%), Positives = 201/250 (80%), Gaps = 4/250 (1%)
Frame = +2
Query: 2 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 181
VG+NGFGRIGRLV RAA+ G V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVKAENG 63
Query: 182 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 361
KLV++GHA++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGHAITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 362 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 541
SADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TAT
Sbjct: 123 SADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITAT 182
Query: 542 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSV-- 715
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSV
Sbjct: 183 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 716 --CRFDLQTK 739
CR + K
Sbjct: 243 LTCRLEKPAK 252
Score = 32.3 bits (72), Expect = 1.5
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 717 VDLTCKLKKAAKYDEIK 767
VDLTC+L+K AKYD+IK
Sbjct: 241 VDLTCRLEKPAKYDDIK 257
>sp|P10096|G3P_BOVIN Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 320
Score = 348 bits (894), Expect = 7e-96
Identities = 173/250 (69%), Positives = 201/250 (80%), Gaps = 4/250 (1%)
Frame = +2
Query: 2 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 181
VG+NGFGRIGRLV RAA G VD+VA+NDPFI+L YMVYMF+YDSTHGKF+G V+A++G
Sbjct: 3 VGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFNGTVKAENG 62
Query: 182 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 361
KLV++G A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 63 KLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 121
Query: 362 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 541
SADAPMFVMGVNHEKY+ +L IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TAT
Sbjct: 122 SADAPMFVMGVNHEKYNNTLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITAT 181
Query: 542 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSV-- 715
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSV
Sbjct: 182 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 241
Query: 716 --CRFDLQTK 739
CR + K
Sbjct: 242 LTCRLEKPAK 251
Score = 33.5 bits (75), Expect = 0.65
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 717 VDLTCKLKKAAKYDEIK 767
VDLTC+L+K AKYDEIK
Sbjct: 240 VDLTCRLEKPAKYDEIK 256
>sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 347 bits (891), Expect = 2e-95
Identities = 174/250 (69%), Positives = 201/250 (80%), Gaps = 4/250 (1%)
Frame = +2
Query: 2 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 181
VG+NGFGRIGRLV RAA+ G V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVKAENG 63
Query: 182 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 361
KLV++G+A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGNAITIFQERDPSNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 362 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 541
SADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TAT
Sbjct: 123 SADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITAT 182
Query: 542 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSV-- 715
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSV
Sbjct: 183 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 716 --CRFDLQTK 739
CR + K
Sbjct: 243 LTCRLEKPAK 252
Score = 32.3 bits (72), Expect = 1.5
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 717 VDLTCKLKKAAKYDEIK 767
VDLTC+L+K AKYD+IK
Sbjct: 241 VDLTCRLEKPAKYDDIK 257
>sp|P16858|G3P_MOUSE Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 346 bits (888), Expect = 3e-95
Identities = 172/250 (68%), Positives = 202/250 (80%), Gaps = 4/250 (1%)
Frame = +2
Query: 2 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 181
VG+NGFGRIGRLV RAA+ G V++VA+NDPFI+L+YMVYMF+YDSTHGKF+G V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAICSGKVEIVAINDPFIDLNYMVYMFQYDSTHGKFNGTVKAENG 63
Query: 182 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 361
KLV++G ++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGKPITIFQERDPTNIKWGEAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 362 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 541
SADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TAT
Sbjct: 123 SADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITAT 182
Query: 542 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSV-- 715
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSV
Sbjct: 183 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 716 --CRFDLQTK 739
CR + K
Sbjct: 243 LTCRLEKPAK 252
Score = 32.3 bits (72), Expect = 1.5
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 717 VDLTCKLKKAAKYDEIK 767
VDLTC+L+K AKYD+IK
Sbjct: 241 VDLTCRLEKPAKYDDIK 257
>sp|P04406|G3P2_HUMAN Glyceraldehyde-3-phosphate dehydrogenase, liver (GAPDH)
Length = 335
Score = 345 bits (886), Expect = 6e-95
Identities = 170/250 (68%), Positives = 201/250 (80%), Gaps = 4/250 (1%)
Frame = +2
Query: 2 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 181
VG+NGFGRIGRLV RAA G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V+A++G
Sbjct: 6 VGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENG 65
Query: 182 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 361
KLV++G+ ++++ +R+P +I W YVVESTGVFTT+EKA AH + AK+V+ISAP
Sbjct: 66 KLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGG-AKRVIISAP 124
Query: 362 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 541
SADAPMFVMGVNHEKYD SL I+SNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TAT
Sbjct: 125 SADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITAT 184
Query: 542 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSV-- 715
QKTVDGPS KLWRDGRGA QNIIP IPELNGK+TGMAFRVP +VSV
Sbjct: 185 QKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVSVVD 244
Query: 716 --CRFDLQTK 739
CR + K
Sbjct: 245 LTCRLEKPAK 254
Score = 32.3 bits (72), Expect = 1.5
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 717 VDLTCKLKKAAKYDEIK 767
VDLTC+L+K AKYD+IK
Sbjct: 243 VDLTCRLEKPAKYDDIK 259
>sp|O57479|G3P_COLLI Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 345 bits (886), Expect = 6e-95
Identities = 173/250 (69%), Positives = 200/250 (80%), Gaps = 4/250 (1%)
Frame = +2
Query: 2 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 181
VG+NGFGRIGRLV RAA+ V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAILSAKVQVVAINDPFIDLNYMVYMFKYDSTHGHFRGTVKAENG 63
Query: 182 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 361
KLV++G+A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGNAITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 362 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 541
SADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TAT
Sbjct: 123 SADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITAT 182
Query: 542 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSV-- 715
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSV
Sbjct: 183 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 716 --CRFDLQTK 739
CR + K
Sbjct: 243 LTCRLEKPAK 252
Score = 32.3 bits (72), Expect = 1.5
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 717 VDLTCKLKKAAKYDEIK 767
VDLTC+L+K AKYD+IK
Sbjct: 241 VDLTCRLEKPAKYDDIK 257
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,966,609
Number of Sequences: 369166
Number of extensions: 1871445
Number of successful extensions: 5437
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4985
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7115329200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)