Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_L06
(834 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 226 5e-59
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 219 7e-57
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 219 1e-56
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 215 1e-55
sp|P55097|CATK_MOUSE Cathepsin K precursor 215 1e-55
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 214 3e-55
sp|O35186|CATK_RAT Cathepsin K precursor 214 3e-55
sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein) 213 4e-55
sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (C... 213 7e-55
sp|P61277|CATK_MACMU Cathepsin K precursor >gi|47117667|sp|... 213 7e-55
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 226 bits (577), Expect = 5e-59
Identities = 125/276 (45%), Positives = 164/276 (59%), Gaps = 1/276 (0%)
Frame = +2
Query: 8 VAVQSAPQSFSIDTKLNDEWEAYKLKFNKKYDPLNELSRRMIWEDNLKYIQQHNLEYDLG 187
+ + SA F D L+ +W +K + Y E RR +WE N+K I+ HN EY G
Sbjct: 12 LGIASAVPKF--DQNLDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIELHNGEYSQG 69
Query: 188 KHSYTLAVNQFTDMTNEEFKAKYLTNISIQRNSTGSSFIVPENVKDLPQSVDWRKRGFVT 367
KH +T+A+N F DMTNEEF+ + + Q+ G F P + DLP+SVDWRK+G+VT
Sbjct: 70 KHGFTMAMNAFGDMTNEEFR-QMMGCFRNQKFRKGKVFREPLFL-DLPKSVDWRKKGYVT 127
Query: 368 PVKNQKTCGSCYAFSATGSLEGQYFRKTKKLVSFSEQQIVDCSEEFGNRGCGGGFSKLSF 547
PVKNQK CGSC+AFSATG+LEGQ FRKT KLVS SEQ +VDCS GN+GC GGF +F
Sbjct: 128 PVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAF 187
Query: 548 DXXXXXXXXXXXXXXXXXXXXR-CRYNKSKVIVKSKGFTNIRSRDEEALAQAVAYIGPIS 724
C+Y + GFT + E+AL +AVA +GPIS
Sbjct: 188 QYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPIS 247
Query: 725 VRIDASRRSFIEYSGNGIYYDPNCDSDHLRHAVLVV 832
V +DA SF ++ +GIY++P+C S +L H VLVV
Sbjct: 248 VAMDAGHSSF-QFYKSGIYFEPDCSSKNLDHGVLVV 282
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 219 bits (558), Expect = 7e-57
Identities = 123/277 (44%), Positives = 160/277 (57%), Gaps = 2/277 (0%)
Frame = +2
Query: 8 VAVQSAPQSFSIDTKLNDEWEAYKLKFNKKYDPLNELSRRMIWEDNLKYIQQHNLEYDLG 187
+ + SA F D LN +W +K + Y E RR +WE N+K I+ HN EY G
Sbjct: 12 LGIASAAPKF--DQSLNAQWYQWKATHRRLYGMNEEGWRRAVWEKNMKMIELHNREYSQG 69
Query: 188 KHSYTLAVNQFTDMTNEEFKAKYLTNISIQRNSTGSSFIVPENVKDLPQSVDWRKRGFVT 367
KH +T+A+N F DMTNEEF+ + + Q++ G F P ++P+SVDWR++G+VT
Sbjct: 70 KHGFTMAMNAFGDMTNEEFR-QVMNGFQNQKHKKGKMFQEPL-FAEIPKSVDWREKGYVT 127
Query: 368 PVKNQKTCGSCYAFSATGSLEGQYFRKTKKLVSFSEQQIVDCSEEFGNRGCGGGFSKLSF 547
PVKNQ CGSC+AFSATG+LEGQ FRKT KLVS SEQ +VDCS GN GC GG +F
Sbjct: 128 PVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAF 187
Query: 548 D--XXXXXXXXXXXXXXXXXXXXRCRYNKSKVIVKSKGFTNIRSRDEEALAQAVAYIGPI 721
C Y GF ++ R E+AL +AVA +GPI
Sbjct: 188 RYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLPQR-EKALMKAVATLGPI 246
Query: 722 SVRIDASRRSFIEYSGNGIYYDPNCDSDHLRHAVLVV 832
SV IDA +SF ++ +GIY+DP+C S L H VLVV
Sbjct: 247 SVAIDAGHQSF-QFYKSGIYFDPDCSSKDLDHGVLVV 282
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 219 bits (557), Expect = 1e-56
Identities = 118/271 (43%), Positives = 159/271 (58%), Gaps = 1/271 (0%)
Frame = +2
Query: 23 APQSFSIDTKLNDEWEAYKLKFNKKYDPLNELSRRMIWEDNLKYIQQHNLEYDLGKHSYT 202
A + + D L +W +K N+ Y E RR +WE N+K I+ HN EY GKHS+T
Sbjct: 15 ASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFT 74
Query: 203 LAVNQFTDMTNEEFKAKYLTNISIQRNSTGSSFIVPENVKDLPQSVDWRKRGFVTPVKNQ 382
+A+N F DMT+EEF+ + + ++ G F P + P+SVDWR++G+VTPVKNQ
Sbjct: 75 MAMNAFGDMTSEEFR-QVMNGFQNRKPRKGKVFQEPL-FYEAPRSVDWREKGYVTPVKNQ 132
Query: 383 KTCGSCYAFSATGSLEGQYFRKTKKLVSFSEQQIVDCSEEFGNRGCGGGFSKLSFDXXXX 562
CGSC+AFSATG+LEGQ FRKT +L+S SEQ +VDCS GN GC GG +F
Sbjct: 133 GQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQD 192
Query: 563 XXXXXXXXXXXXXXXXR-CRYNKSKVIVKSKGFTNIRSRDEEALAQAVAYIGPISVRIDA 739
C+YN + GF +I + E+AL +AVA +GPISV IDA
Sbjct: 193 NGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDI-PKQEKALMKAVATVGPISVAIDA 251
Query: 740 SRRSFIEYSGNGIYYDPNCDSDHLRHAVLVV 832
SF+ Y GIY++P+C S+ + H VLVV
Sbjct: 252 GHESFLFYK-EGIYFEPDCSSEDMDHGVLVV 281
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 215 bits (548), Expect = 1e-55
Identities = 121/266 (45%), Positives = 152/266 (57%), Gaps = 2/266 (0%)
Frame = +2
Query: 41 IDTKLNDEWEAYKLKFNKKYDPLNELSRRMIWEDNLKYIQQHNLEYDLGKHSYTLAVNQF 220
+D L+ W +K + Y E RR +WE N K I HN EY GKH++ +A+N F
Sbjct: 21 LDPNLDAHWHQWKATHRRLYGMNEEEWRRAVWEKNKKIIDLHNQEYSEGKHAFRMAMNAF 80
Query: 221 TDMTNEEFKAKYLTNISIQRNSTGSSFIVPENVKDLPQSVDWRKRGFVTPVKNQKTCGSC 400
DMTNEEF+ + + Q++ G F P V D+P+SVDW K+G+VTPVKNQ CGSC
Sbjct: 81 GDMTNEEFR-QVMNGFQNQKHKKGKLFHEPLLV-DVPKSVDWTKKGYVTPVKNQGQCGSC 138
Query: 401 YAFSATGSLEGQYFRKTKKLVSFSEQQIVDCSEEFGNRGCGGGFSKLSFD--XXXXXXXX 574
+AFSATG+LEGQ FRKT KLVS SEQ +VDCS GN+GC GG +F
Sbjct: 139 WAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDS 198
Query: 575 XXXXXXXXXXXXRCRYNKSKVIVKSKGFTNIRSRDEEALAQAVAYIGPISVRIDASRRSF 754
C Y GF +I R E+AL +AVA +GPISV IDA SF
Sbjct: 199 EESYPYLATDTNSCNYKPECSAANDTGFVDIPQR-EKALMKAVATVGPISVAIDAGHTSF 257
Query: 755 IEYSGNGIYYDPNCDSDHLRHAVLVV 832
++ +GIYYDP+C L H VLVV
Sbjct: 258 -QFYKSGIYYDPDCSCKDLDHGVLVV 282
>sp|P55097|CATK_MOUSE Cathepsin K precursor
Length = 329
Score = 215 bits (547), Expect = 1e-55
Identities = 122/280 (43%), Positives = 167/280 (59%), Gaps = 4/280 (1%)
Frame = +2
Query: 5 FVAVQSAPQSFSIDTKLNDEWEAYKLKFNKKYDP-LNELSRRMIWEDNLKYIQQHNLEYD 181
F+ + + S + L+ +WE +K K+Y+ ++E+SRR+IWE NLK I HNLE
Sbjct: 6 FLLLPMVSFALSPEEMLDTQWELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEAS 65
Query: 182 LGKHSYTLAVNQFTDMTNEEFKAKYLTNISI--QRNSTGSSFIVPENVKDLPQSVDWRKR 355
LG H+Y LA+N DMT+EE K +T + I R+ + + PE +P S+D+RK+
Sbjct: 66 LGVHTYELAMNHLGDMTSEEVVQK-MTGLRIPPSRSYSNDTLYTPEWEGRVPDSIDYRKK 124
Query: 356 GFVTPVKNQKTCGSCYAFSATGSLEGQYFRKTKKLVSFSEQQIVDCSEEFGNRGCGGGFS 535
G+VTPVKNQ CGSC+AFS+ G+LEGQ +KT KL++ S Q +VDC E N GCGGG+
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE--NYGCGGGYM 182
Query: 536 KLSFDXXXXXXXXXXXXXXXXXXXXR-CRYNKSKVIVKSKGFTNIRSRDEEALAQAVAYI 712
+F C YN + K +G+ I +E+AL +AVA +
Sbjct: 183 TTAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARV 242
Query: 713 GPISVRIDASRRSFIEYSGNGIYYDPNCDSDHLRHAVLVV 832
GPISV IDAS SF YS G+YYD NCD D++ HAVLVV
Sbjct: 243 GPISVSIDASLASFQFYS-RGVYYDENCDRDNVNHAVLVV 281
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 214 bits (544), Expect = 3e-55
Identities = 119/266 (44%), Positives = 155/266 (58%), Gaps = 2/266 (0%)
Frame = +2
Query: 41 IDTKLNDEWEAYKLKFNKKYDPLNELSRRMIWEDNLKYIQQHNLEYDLGKHSYTLAVNQF 220
+D L+ +W +K + Y E RR +WE N+K I+ HN EY GKH +++A+N F
Sbjct: 21 LDQNLDADWYKWKATHGRLYGMNEEGWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAF 80
Query: 221 TDMTNEEFKAKYLTNISIQRNSTGSSFIVPENVKDLPQSVDWRKRGFVTPVKNQKTCGSC 400
DMTNEEF+ + + Q++ G F V ++P+SVDWR++G+VT VKNQ CGSC
Sbjct: 81 GDMTNEEFR-QVMNGFQNQKHKKGKVFH-ESLVLEVPKSVDWREKGYVTAVKNQGQCGSC 138
Query: 401 YAFSATGSLEGQYFRKTKKLVSFSEQQIVDCSEEFGNRGCGGGFSKLSFD--XXXXXXXX 574
+AFSATG+LEGQ FRKT KLVS SEQ +VDCS GN+GC GG +F
Sbjct: 139 WAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDT 198
Query: 575 XXXXXXXXXXXXRCRYNKSKVIVKSKGFTNIRSRDEEALAQAVAYIGPISVRIDASRRSF 754
C Y GF +I R E+AL +AVA +GPISV IDA SF
Sbjct: 199 EESYPYLGRETNSCTYKPECSAANDTGFVDIPQR-EKALMKAVATVGPISVAIDAGHSSF 257
Query: 755 IEYSGNGIYYDPNCDSDHLRHAVLVV 832
++ +GIYYDP+C S L H VLVV
Sbjct: 258 -QFYKSGIYYDPDCSSKDLDHGVLVV 282
>sp|O35186|CATK_RAT Cathepsin K precursor
Length = 329
Score = 214 bits (544), Expect = 3e-55
Identities = 119/271 (43%), Positives = 164/271 (60%), Gaps = 4/271 (1%)
Frame = +2
Query: 32 SFSIDTKLNDEWEAYKLKFNKKYDP-LNELSRRMIWEDNLKYIQQHNLEYDLGKHSYTLA 208
+ S + L+ +WE +K K+Y+ ++E+SRR+IWE NLK I HNLE LG H+Y LA
Sbjct: 15 ALSPEETLDTQWELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELA 74
Query: 209 VNQFTDMTNEEFKAKYLTNISI--QRNSTGSSFIVPENVKDLPQSVDWRKRGFVTPVKNQ 382
+N DMT+EE K +T + + R+ + + PE +P S+D+RK+G+VTPVKNQ
Sbjct: 75 MNHLGDMTSEEVVQK-MTGLRVPPSRSFSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQ 133
Query: 383 KTCGSCYAFSATGSLEGQYFRKTKKLVSFSEQQIVDCSEEFGNRGCGGGFSKLSFDXXXX 562
CGSC+AFS+ G+LEGQ +KT KL++ S Q +VDC E N GCGGG+ +F
Sbjct: 134 GQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSE--NYGCGGGYMTTAFQYVQQ 191
Query: 563 XXXXXXXXXXXXXXXXR-CRYNKSKVIVKSKGFTNIRSRDEEALAQAVAYIGPISVRIDA 739
C YN + K +G+ I +E+AL +AVA +GP+SV IDA
Sbjct: 192 NGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDA 251
Query: 740 SRRSFIEYSGNGIYYDPNCDSDHLRHAVLVV 832
S SF YS G+YYD NCD D++ HAVLVV
Sbjct: 252 SLTSFQFYS-RGVYYDENCDRDNVNHAVLVV 281
>sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein)
Length = 329
Score = 213 bits (543), Expect = 4e-55
Identities = 116/264 (43%), Positives = 163/264 (61%), Gaps = 4/264 (1%)
Frame = +2
Query: 53 LNDEWEAYKLKFNKKYDP-LNELSRRMIWEDNLKYIQQHNLEYDLGKHSYTLAVNQFTDM 229
L+ +WE +K ++K+Y+ ++E+SRR+IWE NLK+I HNLE LG H+Y LA+N DM
Sbjct: 22 LDTQWELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDM 81
Query: 230 TNEEFKAKYLTNISI--QRNSTGSSFIVPENVKDLPQSVDWRKRGFVTPVKNQKTCGSCY 403
T+EE K +T + + R+ + + +P+ P S+D+RK+G+VTPVKNQ CGSC+
Sbjct: 82 TSEEVVQK-MTGLKVPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCW 140
Query: 404 AFSATGSLEGQYFRKTKKLVSFSEQQIVDCSEEFGNRGCGGGFSKLSFDXXXXXXXXXXX 583
AFS+ G+LEGQ +KT KL++ S Q +VDC E N GCGGG+ +F
Sbjct: 141 AFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NYGCGGGYMTNAFQYVQRNRGIDSE 198
Query: 584 XXXXXXXXXR-CRYNKSKVIVKSKGFTNIRSRDEEALAQAVAYIGPISVRIDASRRSFIE 760
C YN + K +G+ I +E+AL +AVA +GP+SV IDAS SF
Sbjct: 199 DAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQF 258
Query: 761 YSGNGIYYDPNCDSDHLRHAVLVV 832
YS G+YYD NC SD++ HAVL V
Sbjct: 259 YS-KGVYYDENCSSDNVNHAVLAV 281
>sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (Cathepsin X) (Cathepsin O2)
Length = 329
Score = 213 bits (541), Expect = 7e-55
Identities = 117/263 (44%), Positives = 158/263 (60%), Gaps = 3/263 (1%)
Frame = +2
Query: 53 LNDEWEAYKLKFNKKYD-PLNELSRRMIWEDNLKYIQQHNLEYDLGKHSYTLAVNQFTDM 229
L+ WE +K K+Y+ ++E+SRR+IWE NLKYI HNLE LG H+Y LA+N DM
Sbjct: 22 LDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDM 81
Query: 230 TNEEFKAKYL-TNISIQRNSTGSSFIVPENVKDLPQSVDWRKRGFVTPVKNQKTCGSCYA 406
T+EE K + + + + + +PE P SVD+RK+G+VTPVKNQ CGSC+A
Sbjct: 82 TSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWA 141
Query: 407 FSATGSLEGQYFRKTKKLVSFSEQQIVDCSEEFGNRGCGGGFSKLSFDXXXXXXXXXXXX 586
FS+ G+LEGQ +KT KL++ S Q +VDC E N GCGGG+ +F
Sbjct: 142 FSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSED 199
Query: 587 XXXXXXXXR-CRYNKSKVIVKSKGFTNIRSRDEEALAQAVAYIGPISVRIDASRRSFIEY 763
C YN + K +G+ I +E+AL +AVA +GP+SV IDAS SF Y
Sbjct: 200 AYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFY 259
Query: 764 SGNGIYYDPNCDSDHLRHAVLVV 832
S G+YYD +C+SD+L HAVL V
Sbjct: 260 S-KGVYYDESCNSDNLNHAVLAV 281
>sp|P61277|CATK_MACMU Cathepsin K precursor
sp|P61276|CATK_MACFA Cathepsin K precursor
Length = 329
Score = 213 bits (541), Expect = 7e-55
Identities = 119/264 (45%), Positives = 161/264 (60%), Gaps = 4/264 (1%)
Frame = +2
Query: 53 LNDEWEAYKLKFNKKYDP-LNELSRRMIWEDNLKYIQQHNLEYDLGKHSYTLAVNQFTDM 229
L+ WE +K K+Y+ ++E+SRR+IWE NLKYI HNLE LG H+Y LA+N DM
Sbjct: 22 LDTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDM 81
Query: 230 TNEEFKAKYLTNISIQRNSTGSS--FIVPENVKDLPQSVDWRKRGFVTPVKNQKTCGSCY 403
TNEE K +T + + + + S+ +P+ P SVD+RK+G+VTPVKNQ CGSC+
Sbjct: 82 TNEEVVQK-MTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCW 140
Query: 404 AFSATGSLEGQYFRKTKKLVSFSEQQIVDCSEEFGNRGCGGGFSKLSFDXXXXXXXXXXX 583
AFS+ G+LEGQ +KT KL++ S Q +VDC E N GCGGG+ +F
Sbjct: 141 AFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSE 198
Query: 584 XXXXXXXXXR-CRYNKSKVIVKSKGFTNIRSRDEEALAQAVAYIGPISVRIDASRRSFIE 760
C YN + K +G+ I +E+AL +AVA +GP+SV IDAS SF
Sbjct: 199 DAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQF 258
Query: 761 YSGNGIYYDPNCDSDHLRHAVLVV 832
YS G+YYD +C+SD+L HAVL V
Sbjct: 259 YS-KGVYYDESCNSDNLNHAVLAV 281
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,647,209
Number of Sequences: 369166
Number of extensions: 1894252
Number of successful extensions: 5862
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5566
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8100769320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)