Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_J12
(377 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9Y7Z8|MYO1_SCHPO Myosin-1 31 1.0
sp|P48614|WN10B_MOUSE Wnt-10b protein precursor (Wnt-12) 30 1.3
sp|O00744|WN1B_HUMAN Wnt-10b protein precursor (Wnt-12) 30 1.3
sp|P49339|WNT11_CHICK Wnt-11 protein precursor 30 1.7
sp|P51891|WNT11_COTJA Wnt-11 protein precursor 30 1.7
sp|Q06442|WNT5A_AMBME Wnt-5a protein precursor 30 2.2
sp|P41221|WNT5A_HUMAN Wnt-5a protein precursor 30 2.2
sp|Q9QXQ7|WNT5A_RAT Wnt-5a protein precursor 30 2.2
sp|P31286|WNT5A_XENLA Wnt-5a protein precursor (XWnt-5a) 30 2.2
sp|O13267|WNT5A_PLEWA Wnt-5a protein precursor (PWnt-5a) 30 2.2
>sp|Q9Y7Z8|MYO1_SCHPO Myosin-1
Length = 1217
Score = 30.8 bits (68), Expect = 1.0
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 214 IHFHNEQLQQIFINFVLRFIDEILHVVINEQMLYVSLL*FNHDAIADIYD 363
I++ NE+LQQIFI L+ E + EQ+ + + FN+ + D+ +
Sbjct: 431 INYVNEKLQQIFIELTLKTEQE---EYVREQIAWTPIKYFNNKVVCDLIE 477
>sp|P48614|WN10B_MOUSE Wnt-10b protein precursor (Wnt-12)
Length = 389
Score = 30.4 bits (67), Expect = 1.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 16 KRCHWNCRWCCYSLCSK 66
+RCH WCCY LC +
Sbjct: 362 ERCHCRFHWCCYVLCDE 378
>sp|O00744|WN1B_HUMAN Wnt-10b protein precursor (Wnt-12)
Length = 389
Score = 30.4 bits (67), Expect = 1.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 16 KRCHWNCRWCCYSLCSK 66
+RCH WCCY LC +
Sbjct: 362 ERCHCRFHWCCYVLCDE 378
>sp|P49339|WNT11_CHICK Wnt-11 protein precursor
Length = 354
Score = 30.0 bits (66), Expect = 1.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 16 KRCHWNCRWCCYSLCSK 66
+RCH WCCY C K
Sbjct: 327 ERCHCKYHWCCYVTCKK 343
>sp|P51891|WNT11_COTJA Wnt-11 protein precursor
Length = 354
Score = 30.0 bits (66), Expect = 1.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 16 KRCHWNCRWCCYSLCSK 66
+RCH WCCY C K
Sbjct: 327 ERCHCKYHWCCYVTCKK 343
>sp|Q06442|WNT5A_AMBME Wnt-5a protein precursor
Length = 359
Score = 29.6 bits (65), Expect = 2.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 16 KRCHWNCRWCCYSLCSK 66
+RCH WCCY C K
Sbjct: 332 ERCHCKFHWCCYVKCKK 348
>sp|P41221|WNT5A_HUMAN Wnt-5a protein precursor
Length = 365
Score = 29.6 bits (65), Expect = 2.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 16 KRCHWNCRWCCYSLCSK 66
+RCH WCCY C K
Sbjct: 338 ERCHCKFHWCCYVKCKK 354
>sp|Q9QXQ7|WNT5A_RAT Wnt-5a protein precursor
Length = 379
Score = 29.6 bits (65), Expect = 2.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 16 KRCHWNCRWCCYSLCSK 66
+RCH WCCY C K
Sbjct: 352 ERCHCKFHWCCYVKCKK 368
>sp|P31286|WNT5A_XENLA Wnt-5a protein precursor (XWnt-5a)
Length = 380
Score = 29.6 bits (65), Expect = 2.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 16 KRCHWNCRWCCYSLCSK 66
+RCH WCCY C K
Sbjct: 353 ERCHCKFHWCCYVKCKK 369
>sp|O13267|WNT5A_PLEWA Wnt-5a protein precursor (PWnt-5a)
Length = 359
Score = 29.6 bits (65), Expect = 2.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 16 KRCHWNCRWCCYSLCSK 66
+RCH WCCY C K
Sbjct: 332 ERCHCKFHWCCYVKCKK 348
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,435,712
Number of Sequences: 369166
Number of extensions: 417548
Number of successful extensions: 1222
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 68,354,980
effective HSP length: 92
effective length of database: 51,359,360
effective search space used: 1694858880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)