Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_I19
(759 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9BPX1|DHR10_HUMAN Dehydrogenase/reductase SDR family me... 166 8e-41
sp|Q9MYP6|DHR10_BOVIN Dehydrogenase/reductase SDR family me... 163 4e-40
sp|Q8KWT4|BACC2_BACSU Bacilysin biosynthesis oxidoreductase... 110 5e-24
sp|Q9WYG0|Y325_THEMA Hypothetical oxidoreductase TM0325 107 5e-23
sp|P39640|BACC_BACSU Bacilysin biosynthesis oxidoreductase ... 104 2e-22
sp|P50160|TS2_MAIZE Sex determination protein tasselseed 2 100 3e-21
sp|P46331|YXBG_BACSU Hypothetical oxidoreductase yxbG 100 4e-21
sp|Q9X248|FABG_THEMA 3-oxoacyl-[acyl-carrier-protein] reduc... 100 4e-21
sp|Q8GAV9|CPNA_COMS9 Cyclopentanol dehydrogenase >gi|622865... 97 4e-20
sp|Q9ASX2|TRNH1_ARATH Putative tropinone reductase homolog ... 95 2e-19
>sp|Q9BPX1|DHR10_HUMAN Dehydrogenase/reductase SDR family member 10 (Retinal short-chain
dehydrogenase/reductase retSDR3)
Length = 270
Score = 166 bits (419), Expect = 8e-41
Identities = 86/189 (45%), Positives = 119/189 (62%), Gaps = 1/189 (0%)
Frame = +2
Query: 107 FDNKIILIVGGTSGIGAACVKQFASTNATVVFCSNDQKNGNELVNELSGRNVIFLFCNVT 286
+ K++++ GG GIGA V+ F ++ A VV C D+ G L EL G +F+ C+VT
Sbjct: 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG--AVFILCDVT 64
Query: 287 IEDDIKSVINHIENIHG-GKLDCLINNVGTHPEDRKIXXXXXXXXXXXXNINVKSHFLFC 463
EDD+K++++ E I G+LDC++NN G HP ++ +N+ +
Sbjct: 65 QEDDVKTLVS--ETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 122
Query: 464 KYSMPMLRKYRGCIINMSSQVGTIGQKNAVTYAITKGAITAMTKSLALDEAEYGVRVNCI 643
K ++P LRK +G +IN+SS VG IGQ AV Y TKGA+TAMTK+LALDE+ YGVRVNCI
Sbjct: 123 KLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCI 182
Query: 644 SPGIINTPL 670
SPG I TPL
Sbjct: 183 SPGNIWTPL 191
>sp|Q9MYP6|DHR10_BOVIN Dehydrogenase/reductase SDR family member 10 (Retinal short-chain
dehydrogenase/reductase retSDR3)
Length = 270
Score = 163 bits (413), Expect = 4e-40
Identities = 85/189 (44%), Positives = 118/189 (62%), Gaps = 1/189 (0%)
Frame = +2
Query: 107 FDNKIILIVGGTSGIGAACVKQFASTNATVVFCSNDQKNGNELVNELSGRNVIFLFCNVT 286
+ K++++ GG GIGA V+ F + A VV C D+ G + EL G +FL C+VT
Sbjct: 7 YAGKVVIVTGGGRGIGAGIVRAFVESGAQVVICDKDEARGRAVERELPG--TVFLLCDVT 64
Query: 287 IEDDIKSVINHIENIHG-GKLDCLINNVGTHPEDRKIXXXXXXXXXXXXNINVKSHFLFC 463
E+D++++++ E I G+LDC++NN G HP + +N+ +
Sbjct: 65 REEDVRTLVS--ETIRRFGRLDCIVNNAGYHPPPQWPEETSAQGFRQLLELNLLGTYTLT 122
Query: 464 KYSMPMLRKYRGCIINMSSQVGTIGQKNAVTYAITKGAITAMTKSLALDEAEYGVRVNCI 643
K ++P LRK RG +IN+SS VG IGQ AV Y TKGA+TAMTK+LALDE++YGVRVNCI
Sbjct: 123 KLALPHLRKSRGNVINISSLVGAIGQSQAVPYVATKGAVTAMTKALALDESQYGVRVNCI 182
Query: 644 SPGIINTPL 670
SPG I TPL
Sbjct: 183 SPGNIWTPL 191
>sp|Q8KWT4|BACC2_BACSU Bacilysin biosynthesis oxidoreductase bacC
Length = 253
Score = 110 bits (274), Expect = 5e-24
Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 1/199 (0%)
Frame = +2
Query: 101 MNFDNKIILIVGGTSGIGAACVKQFASTNATVVFCSNDQKNGNELVNELSGRNVIFLFCN 280
MN +K +LI GG SGIG A V+ F + A VV D+ G ++ + + + F+ +
Sbjct: 1 MNLTDKTVLITGGASGIGYAAVQAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVHTD 60
Query: 281 VTIEDDIKSVINHIENIHGGKLDCLINNVGTHPEDRKIXXXXXXXXXXXXNINVKSHFLF 460
+T E ++ I + GG LD LINN G I N+N+ FL
Sbjct: 61 ITDEPACQNAIRSAVDKFGG-LDVLINNAGIEIV-APIHEMELSNWNKVLNVNLTGMFLM 118
Query: 461 CKYSMP-MLRKYRGCIINMSSQVGTIGQKNAVTYAITKGAITAMTKSLALDEAEYGVRVN 637
K+++ ML+ +G IIN S G + + Y +KG + +T+S+A+D A++ +RVN
Sbjct: 119 SKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVN 178
Query: 638 CISPGIINTPLLVQNTIDN 694
C+ PGII+TPL ++ ++N
Sbjct: 179 CVCPGIIDTPLNEKSFLEN 197
>sp|Q9WYG0|Y325_THEMA Hypothetical oxidoreductase TM0325
Length = 251
Score = 107 bits (266), Expect = 5e-23
Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 3/222 (1%)
Frame = +2
Query: 101 MNFDNKIILIVGGTSGIGAACVKQFASTNATVVFCSNDQKNGNELVNELS--GRNVIFLF 274
MNF K++LI G SGIG FA A V ++ G E V + G F+F
Sbjct: 1 MNFQGKVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIF 60
Query: 275 CNVTIEDDIKSVINHIENIHGGKLDCLINNVGTHPEDRKIXXXXXXXXXXXXNINVKSHF 454
+V +D + V +E G+LD L+NN G P I +NVK F
Sbjct: 61 GDVA-KDAEQIVKKTVETF--GRLDILVNNAGIVPYGN-IEETSEEDFDKTMAVNVKGPF 116
Query: 455 LFCKYSMPMLRKYRG-CIINMSSQVGTIGQKNAVTYAITKGAITAMTKSLALDEAEYGVR 631
L KY++ ++K G I+N+SS+ G IG Y+++K A+ +T+SLA+D +YG+R
Sbjct: 117 LLSKYAVEQMKKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIR 176
Query: 632 VNCISPGIINTPLLVQNTIDNCRLKGGLSYESEIDKMKKLIP 757
VN + PG + L+ R+K + E + KM IP
Sbjct: 177 VNAVCPGTTQSEGLM------ARVKASPNPEELLKKMTSRIP 212
>sp|P39640|BACC_BACSU Bacilysin biosynthesis oxidoreductase bacC
Length = 253
Score = 104 bits (260), Expect = 2e-22
Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
Frame = +2
Query: 101 MNFDNKIILIVGGTSGIGAACVKQFASTNATVVFCSNDQKNGNELVNELSGRNVIFLFCN 280
MN +K +LI GG SGIG A V+ F A VV D+ G +V + + + F+ +
Sbjct: 1 MNLTDKTVLITGGASGIGYAAVQAFLGQQANVVVADIDEAQGEAMVRKENNDRLHFVQTD 60
Query: 281 VTIEDDIKSVINHIENIHGGKLDCLINNVGTHPEDRKIXXXXXXXXXXXXNINVKSHFLF 460
+T E + + + GG LD LINN G I +N+ FL
Sbjct: 61 ITDEAACQHAVESAVHTFGG-LDVLINNAGIEIV-APIHEMELSDWNKVLQVNLTGMFLM 118
Query: 461 CKYSMP-MLRKYRGCIINMSSQVGTIGQKNAVTYAITKGAITAMTKSLALDEAEYGVRVN 637
K+++ ML +G IIN S G + + Y +KG + +TKS+A+D A++ +RVN
Sbjct: 119 SKHALKHMLAAGKGNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVN 178
Query: 638 CISPGIINTPLLVQNTIDN 694
C+ PGII+TPL ++ ++N
Sbjct: 179 CVCPGIIDTPLNEKSFLEN 197
>sp|P50160|TS2_MAIZE Sex determination protein tasselseed 2
Length = 336
Score = 100 bits (250), Expect = 3e-21
Identities = 62/194 (31%), Positives = 95/194 (48%), Gaps = 5/194 (2%)
Frame = +2
Query: 110 DNKIILIVGGTSGIGAACVKQFASTNATVVFCSNDQKNGNELVNELSGRNVIFLFCNVTI 289
D K+ ++ GG GIG A V+ FA A VV D G L + L G V F+ C+V++
Sbjct: 54 DGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASAL-GPQVSFVRCDVSV 112
Query: 290 EDDIKSVINHIENIHGGKLDCLINNVGTHPED----RKIXXXXXXXXXXXXNINVKSHFL 457
EDD++ ++ + HGG+LD NN G R I +N L
Sbjct: 113 EDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAAL 172
Query: 458 FCKYSMPMLRKYR-GCIINMSSQVGTIGQKNAVTYAITKGAITAMTKSLALDEAEYGVRV 634
K++ + R G I++++S +G Y +K AI +TK+ A + +GVRV
Sbjct: 173 GMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVRV 232
Query: 635 NCISPGIINTPLLV 676
NC+SP + TP+L+
Sbjct: 233 NCVSPFGVATPMLI 246
>sp|P46331|YXBG_BACSU Hypothetical oxidoreductase yxbG
Length = 273
Score = 100 bits (249), Expect = 4e-21
Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 2/194 (1%)
Frame = +2
Query: 98 MMNFDNKIILIVGGTSGIGAACVKQFASTNATVVFCSNDQKNGNELVNEL--SGRNVIFL 271
M +NK +I G +GIG A + FA+ A V+ ++ E V+ + +G
Sbjct: 1 MGRLENKTAVITGAATGIGQATAEVFANEGARVIIGDINKDQMEETVDAIRKNGGQAESF 60
Query: 272 FCNVTIEDDIKSVINHIENIHGGKLDCLINNVGTHPEDRKIXXXXXXXXXXXXNINVKSH 451
+V+ E+ +K+ + I++ G +D L NN G E K+ ++++
Sbjct: 61 HLDVSDENSVKAFADQIKDACG-TIDILFNNAGVDQEGGKVHEYPVDLFDRIIAVDLRGT 119
Query: 452 FLFCKYSMPMLRKYRGCIINMSSQVGTIGQKNAVTYAITKGAITAMTKSLALDEAEYGVR 631
FL KY +P++ + G IIN SS G + Y KG IT +TK++A+D A G+R
Sbjct: 120 FLCSKYLIPLMLENGGSIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNGIR 179
Query: 632 VNCISPGIINTPLL 673
VN ISPG I TPL+
Sbjct: 180 VNSISPGTIETPLI 193
>sp|Q9X248|FABG_THEMA 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier
protein reductase)
Length = 246
Score = 100 bits (249), Expect = 4e-21
Identities = 65/193 (33%), Positives = 95/193 (49%), Gaps = 3/193 (1%)
Frame = +2
Query: 101 MNFDNKIILIVGGTSGIGAACVKQFASTNATVVFCSNDQKNGNELVNELSGR--NVIFLF 274
M + K+ LI G SGIG A FA ATV+ ++N + LV E G V
Sbjct: 1 MRLEGKVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDPYV 60
Query: 275 CNVTIEDDIKSVINHIENIHGGKLDCLINNVGTHPEDRKIXXXXXXXXXXXXNINVKSHF 454
NVT D IK V+ + +G ++D L+NN G D + N+N+K F
Sbjct: 61 LNVTDRDQIKEVVEKVVQKYG-RIDVLVNNAGI-TRDALLVRMKEEDWDAVINVNLKGVF 118
Query: 455 LFCKYSMP-MLRKYRGCIINMSSQVGTIGQKNAVTYAITKGAITAMTKSLALDEAEYGVR 631
+ +P M+++ G I+N+SS VG G YA +K + MTK+ A + A +R
Sbjct: 119 NVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIR 178
Query: 632 VNCISPGIINTPL 670
VN ++PG I TP+
Sbjct: 179 VNAVAPGFIETPM 191
>sp|Q8GAV9|CPNA_COMS9 Cyclopentanol dehydrogenase
sp|Q937L4|CPNA_COMTE Cyclopentanol dehydrogenase
Length = 250
Score = 97.4 bits (241), Expect = 4e-20
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Frame = +2
Query: 98 MMNFDNKIILIVGGTSGIGAACVKQFASTNATVVFCSNDQKNGNELVNEL--SGRNVIFL 271
M ++K++L+ GG G+G A ATV +++ G++ V E+ G FL
Sbjct: 1 MGRVNDKVVLVTGGAMGMGLTHCTLLAREGATVYLSDMNEELGHQAVAEIRRQGGKAHFL 60
Query: 272 FCNVTIEDDIKSVINHIENIHGGKLDCLINNVGTHPEDRKIXXXXXXXXXXXXNINVKSH 451
+VT E+ ++ I +LD L+NN G + + INV+S
Sbjct: 61 HLDVTNENHWTGAVDTIL-AESDRLDALVNNAGILTL-KPVQDTSNEEWDRIFEINVRSV 118
Query: 452 FLFCKYSM-PMLRKYRGCIINMSSQVGTIGQKNAVTYAITKGAITAMTKSLALDEAEYGV 628
FL + + PM + ++GCI+N+SS G +G A Y +KGA+ TK+ A+D A + +
Sbjct: 119 FLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNI 178
Query: 629 RVNCISPGIINTPLLVQ 679
RVN + PG+I TP+ Q
Sbjct: 179 RVNSVHPGVIATPMTQQ 195
>sp|Q9ASX2|TRNH1_ARATH Putative tropinone reductase homolog At1g07440
Length = 266
Score = 95.1 bits (235), Expect = 2e-19
Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Frame = +2
Query: 116 KIILIVGGTSGIGAACVKQFASTNATVVFCSNDQKNGNELVN--ELSGRNVIFLFCNVTI 289
K +L+ GGT GIG A V++FA A + C+ ++ NE ++ + G V C+ ++
Sbjct: 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL 74
Query: 290 EDDIKSVINHIENIHGGKLDCLINNVGTHPEDRKIXXXXXXXXXXXXNINVKSHFLFCKY 469
+ + ++ + ++ GGKLD LINN+G + + N++S + +
Sbjct: 75 RPEREKLMQTVSSMFGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYHLSQL 133
Query: 470 SMPMLRKYRGC--IINMSSQVGTIGQKNAVTYAITKGAITAMTKSLALDEAEYGVRVNCI 643
+ P+L K GC II MSS G + Y+ TKGA+ + ++LA + A G+R N +
Sbjct: 134 AHPLL-KASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAV 192
Query: 644 SPGIINTPL 670
+P +I TPL
Sbjct: 193 APAVIATPL 201
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,645,267
Number of Sequences: 369166
Number of extensions: 1235384
Number of successful extensions: 3698
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3536
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6970118400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)